Click here to switch to the map view.

The map label for this gene is 83312847

Identifier: 83312847

GI number: 83312847

Start: 4123449

End: 4124252

Strand: Reverse

Name: 83312847

Synonym: amb3748

Alternate gene names: NA

Gene position: 4124252-4123449 (Counterclockwise)

Preceding gene: 83312852

Following gene: 83312846

Centisome position: 83.03

GC content: 70.9

Gene sequence:

>804_bases
ATGAACAATGGACGAATTCACGGAGTCCGGATCATGAAAGCCCGTTTTGCCGCTCAGCCCCTGCCCCTGGCCCTGGCCCT
GATGCTGTCGGCCTGCTCCCTGACCGGGGGGCTGGGCGAGAGCGGCGGCATGTCCGCGGGGGTCGAGCCCAGCTTGCGTG
CCGCCGCCCAGGCGGCCGAGGCCGGCCGCGACTATCAGGGCGCCGTCCAGCATCTGTCCACCCTGTATCAGCGCCGGCCC
GACGACGGCGGGCTGGCCGTCGCCCTGGCGCGCAACCTGCGCTATTCCGGCCAGGGGCAGGCGGCGGCCGACCTGATGCA
GGCTCATCTCGCCCGCAACAGCCGCGAGGCAGCCAGCCTGCTGGAAATGGGCAAGGATTATCTGGCCGCCGACCGGGCCG
GTCTGGCCATCAAGAGCCTGGAAGAGGCGCGGATTCTGGCCCCGGGCAATTGGGATATCCACTCCACCCTGGGCGTGGCG
CTGGATTCCCAGGGCCATGCCGCCGAGGCCCAGGCCGCCTATGCCAAGGCCCTGGAGATCACTCCCGACAACGCCGCCGT
GCTGAACAATCTCGGCCTGTCCCAGGCTCTGTCCGGACAGTTGGATGCGGCGCTGGCGACCCTGAGCCGGGCCGCCGACC
TGCCCGCCGCCACCGCCCAGGTGCGTCAGAATCTGGCCTTGCTGCTGGCGCTCAAGGGCAACGGGGCCGAGGCCGAGCGC
ATGGCGCGGCGCGACCTGTCGCCGGAGCAGGCCAAGGCCAATGCCGAGACCTTGCGCGCCCTGGCGGCTTCGGCGCGACG
CTGA

Upstream 100 bases:

>100_bases
GGATTGCCGGGCCTTCATGGCGCGCCTCGACCGGTTATGGTGACGCCGCCATCATAGACATGAATGAAGCGCGCCACAGT
GGTAGTCTTCACAAAGGTCT

Downstream 100 bases:

>100_bases
GCCTGACGGTGTCGGCTGTGTCGTGCCGCGACACAAATTCCGCCAGGATTGCGCCGAATCGGCGAATATCGGCGAAAGTT
GTTTCAATAAGGTCGTGTGA

Product: Flp pilus assembly protein TadD

Products: NA

Alternate protein names: Pilus Assembly Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide; Flp Pilus Assembly Protein TadD; Tetratricopeptide-Repeat Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MNNGRIHGVRIMKARFAAQPLPLALALMLSACSLTGGLGESGGMSAGVEPSLRAAAQAAEAGRDYQGAVQHLSTLYQRRP
DDGGLAVALARNLRYSGQGQAAADLMQAHLARNSREAASLLEMGKDYLAADRAGLAIKSLEEARILAPGNWDIHSTLGVA
LDSQGHAAEAQAAYAKALEITPDNAAVLNNLGLSQALSGQLDAALATLSRAADLPAATAQVRQNLALLLALKGNGAEAER
MARRDLSPEQAKANAETLRALAASARR

Sequences:

>Translated_267_residues
MNNGRIHGVRIMKARFAAQPLPLALALMLSACSLTGGLGESGGMSAGVEPSLRAAAQAAEAGRDYQGAVQHLSTLYQRRP
DDGGLAVALARNLRYSGQGQAAADLMQAHLARNSREAASLLEMGKDYLAADRAGLAIKSLEEARILAPGNWDIHSTLGVA
LDSQGHAAEAQAAYAKALEITPDNAAVLNNLGLSQALSGQLDAALATLSRAADLPAATAQVRQNLALLLALKGNGAEAER
MARRDLSPEQAKANAETLRALAASARR
>Mature_267_residues
MNNGRIHGVRIMKARFAAQPLPLALALMLSACSLTGGLGESGGMSAGVEPSLRAAAQAAEAGRDYQGAVQHLSTLYQRRP
DDGGLAVALARNLRYSGQGQAAADLMQAHLARNSREAASLLEMGKDYLAADRAGLAIKSLEEARILAPGNWDIHSTLGVA
LDSQGHAAEAQAAYAKALEITPDNAAVLNNLGLSQALSGQLDAALATLSRAADLPAATAQVRQNLALLLALKGNGAEAER
MARRDLSPEQAKANAETLRALAASARR

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27673; Mature: 27673

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNGRIHGVRIMKARFAAQPLPLALALMLSACSLTGGLGESGGMSAGVEPSLRAAAQAAE
CCCCCEEHEEHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
AGRDYQGAVQHLSTLYQRRPDDGGLAVALARNLRYSGQGQAAADLMQAHLARNSREAASL
CCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHH
LEMGKDYLAADRAGLAIKSLEEARILAPGNWDIHSTLGVALDSQGHAAEAQAAYAKALEI
HHHHHHHHHHHHCCHHHHHHHHCEEECCCCCCHHHHHHHEECCCCCHHHHHHHHHHHHCC
TPDNAAVLNNLGLSQALSGQLDAALATLSRAADLPAATAQVRQNLALLLALKGNGAEAER
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCCCHHHHH
MARRDLSPEQAKANAETLRALAASARR
HHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNGRIHGVRIMKARFAAQPLPLALALMLSACSLTGGLGESGGMSAGVEPSLRAAAQAAE
CCCCCEEHEEHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
AGRDYQGAVQHLSTLYQRRPDDGGLAVALARNLRYSGQGQAAADLMQAHLARNSREAASL
CCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHH
LEMGKDYLAADRAGLAIKSLEEARILAPGNWDIHSTLGVALDSQGHAAEAQAAYAKALEI
HHHHHHHHHHHHCCHHHHHHHHCEEECCCCCCHHHHHHHEECCCCCHHHHHHHHHHHHCC
TPDNAAVLNNLGLSQALSGQLDAALATLSRAADLPAATAQVRQNLALLLALKGNGAEAER
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCCCHHHHH
MARRDLSPEQAKANAETLRALAASARR
HHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA