Click here to switch to the map view.

The map label for this gene is yjjW [C]

Identifier: 83312779

GI number: 83312779

Start: 4044152

End: 4045360

Strand: Reverse

Name: yjjW [C]

Synonym: amb3680

Alternate gene names: 83312779

Gene position: 4045360-4044152 (Counterclockwise)

Preceding gene: 83312784

Following gene: 83312776

Centisome position: 81.44

GC content: 59.55

Gene sequence:

>1209_bases
ATGTTTCGCAGAACCAAGTACTGGACGAAGCTAGGTGACGGTCGCATCCAGTGTGATGTGTGTCCCCGAGAGTGCAAGCT
CCATAATGGGCAGCTTGGTCTCTGCTTCAACCGAGCTGCAATACACGATGAAATTGTTCTGACGACATACGGGCGCAGCA
GTGGGTTTTGCATCGATCCCATTGAGAAGAAGCCTTTAAATCATTTTCTACCGGGAACACCGATCCTGTCTTTAGGAAGC
ATCGGCTGCAACCTAACCTGCAAATTTTGTCAAAATTGGAATATCTCAAAAGAGCATGATAACTTATTGAAAACGCTTGT
TTACGAATCTCGAAATTCACACACAGTTTACACACAGTTATTGAGCGAAAATATCACGCAAAATCAAATAGATGCAATAT
GTAAGGATAGCCAGAACTGGGACATCTCCAAGGCGAGGGAGATCGACAAGCTCAACGACATGGCCGATCCCGAGACCATC
GCCCGGGCGGCGGTGCAGTTGGGCTGCCGCTCGGTGGCCTTCACCTACAACGATCCCGTCATCTTCCTGGAATACGCCGT
GGACGTGGCCAAGGCCTGCCACGCCCTGGGCCTGAAGACCGTGGCGGTGACGGCGGGCTACATCAAGCCCGAGGCCCGGG
CCGAGTTCTACGCCCACATGGATGCCGCCAACGTGGACCTCAAGGCCTTCACCGAGGACTTCTATCACCGCCTGTGCGGC
GCCCATCTGGAAGCGGTAAAGGAGACCCTGGTCTATCTCCGGCACGAGACCGGCGTGTGGGTCGAGGTCACCACCTTGCT
GATCCCCGGCGAGAACGATTCCCCCGAGGAAATCGACGCCCAGACCCGCTGGATGGTCGAGGCGCTGGGCCCCGACGTGC
CGCTGCACTTCTCCGCCTTCCATCCCGACTGGAAGATGCGGGACAAGGACAACACGCCCCCCGCCACCCTGACGCGGGCC
CGCGATATCGCCCTGGGGAACGGCCTTCGCTACGTCTATACCGGCAACGTCCACGACCCGGCGGGCGGCGGCACCTATTG
CTCCGGCTGCGGTGCCCTGCTGATCGGCCGGGACTGGTACGAGCTGTCCACCTGGACCCTGACGCCGGAGGGCCATTGCC
GGCACTGCGGCACCCCGCTGCCCGGCCGCTTCGAGGCGGCGCCGGGAACCTGGGGACGCAAAAGGCAGCCGGTGAGGTTC
CGGCGGTGA

Upstream 100 bases:

>100_bases
GCGCGCATTCAAGTGCGGATTCAAGGTCAGGGCGGCATCAGATTGTGGTAGGCTTTTGCGGTGGCAAAGCCTCTCTTTCC
GAGCGGGAGCTTGTCTCCAA

Downstream 100 bases:

>100_bases
TGTGGGGGCGAGGCGTTATTTGAACGTGTGGACGGTGACGCCGGGCCTGTGTCTGATTTTGGCCAGTATTGGCCCAAGAT
TTTTCTCGGTTGAGGTGTCG

Product: pyruvate-formate lyase-activating enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MFRRTKYWTKLGDGRIQCDVCPRECKLHNGQLGLCFNRAAIHDEIVLTTYGRSSGFCIDPIEKKPLNHFLPGTPILSLGS
IGCNLTCKFCQNWNISKEHDNLLKTLVYESRNSHTVYTQLLSENITQNQIDAICKDSQNWDISKAREIDKLNDMADPETI
ARAAVQLGCRSVAFTYNDPVIFLEYAVDVAKACHALGLKTVAVTAGYIKPEARAEFYAHMDAANVDLKAFTEDFYHRLCG
AHLEAVKETLVYLRHETGVWVEVTTLLIPGENDSPEEIDAQTRWMVEALGPDVPLHFSAFHPDWKMRDKDNTPPATLTRA
RDIALGNGLRYVYTGNVHDPAGGGTYCSGCGALLIGRDWYELSTWTLTPEGHCRHCGTPLPGRFEAAPGTWGRKRQPVRF
RR

Sequences:

>Translated_402_residues
MFRRTKYWTKLGDGRIQCDVCPRECKLHNGQLGLCFNRAAIHDEIVLTTYGRSSGFCIDPIEKKPLNHFLPGTPILSLGS
IGCNLTCKFCQNWNISKEHDNLLKTLVYESRNSHTVYTQLLSENITQNQIDAICKDSQNWDISKAREIDKLNDMADPETI
ARAAVQLGCRSVAFTYNDPVIFLEYAVDVAKACHALGLKTVAVTAGYIKPEARAEFYAHMDAANVDLKAFTEDFYHRLCG
AHLEAVKETLVYLRHETGVWVEVTTLLIPGENDSPEEIDAQTRWMVEALGPDVPLHFSAFHPDWKMRDKDNTPPATLTRA
RDIALGNGLRYVYTGNVHDPAGGGTYCSGCGALLIGRDWYELSTWTLTPEGHCRHCGTPLPGRFEAAPGTWGRKRQPVRF
RR
>Mature_402_residues
MFRRTKYWTKLGDGRIQCDVCPRECKLHNGQLGLCFNRAAIHDEIVLTTYGRSSGFCIDPIEKKPLNHFLPGTPILSLGS
IGCNLTCKFCQNWNISKEHDNLLKTLVYESRNSHTVYTQLLSENITQNQIDAICKDSQNWDISKAREIDKLNDMADPETI
ARAAVQLGCRSVAFTYNDPVIFLEYAVDVAKACHALGLKTVAVTAGYIKPEARAEFYAHMDAANVDLKAFTEDFYHRLCG
AHLEAVKETLVYLRHETGVWVEVTTLLIPGENDSPEEIDAQTRWMVEALGPDVPLHFSAFHPDWKMRDKDNTPPATLTRA
RDIALGNGLRYVYTGNVHDPAGGGTYCSGCGALLIGRDWYELSTWTLTPEGHCRHCGTPLPGRFEAAPGTWGRKRQPVRF
RR

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 45148; Mature: 45148

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRRTKYWTKLGDGRIQCDVCPRECKLHNGQLGLCFNRAAIHDEIVLTTYGRSSGFCIDP
CCCCCCHHHCCCCCEEEEEECHHHHEECCCCEEEEECCCCCCCEEEEEEECCCCCCEECC
IEKKPLNHFLPGTPILSLGSIGCNLTCKFCQNWNISKEHDNLLKTLVYESRNSHTVYTQL
CCCCCHHHCCCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
LSENITQNQIDAICKDSQNWDISKAREIDKLNDMADPETIARAAVQLGCRSVAFTYNDPV
HHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCE
IFLEYAVDVAKACHALGLKTVAVTAGYIKPEARAEFYAHMDAANVDLKAFTEDFYHRLCG
EEEHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHH
AHLEAVKETLVYLRHETGVWVEVTTLLIPGENDSPEEIDAQTRWMVEALGPDVPLHFSAF
HHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHCHHHHHHHHHHCCCCCEEEEEE
HPDWKMRDKDNTPPATLTRARDIALGNGLRYVYTGNVHDPAGGGTYCSGCGALLIGRDWY
CCCCCCCCCCCCCCHHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCEE
ELSTWTLTPEGHCRHCGTPLPGRFEAAPGTWGRKRQPVRFRR
EEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFRRTKYWTKLGDGRIQCDVCPRECKLHNGQLGLCFNRAAIHDEIVLTTYGRSSGFCIDP
CCCCCCHHHCCCCCEEEEEECHHHHEECCCCEEEEECCCCCCCEEEEEEECCCCCCEECC
IEKKPLNHFLPGTPILSLGSIGCNLTCKFCQNWNISKEHDNLLKTLVYESRNSHTVYTQL
CCCCCHHHCCCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
LSENITQNQIDAICKDSQNWDISKAREIDKLNDMADPETIARAAVQLGCRSVAFTYNDPV
HHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCE
IFLEYAVDVAKACHALGLKTVAVTAGYIKPEARAEFYAHMDAANVDLKAFTEDFYHRLCG
EEEHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHH
AHLEAVKETLVYLRHETGVWVEVTTLLIPGENDSPEEIDAQTRWMVEALGPDVPLHFSAF
HHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHCHHHHHHHHHHCCCCCEEEEEE
HPDWKMRDKDNTPPATLTRARDIALGNGLRYVYTGNVHDPAGGGTYCSGCGALLIGRDWY
CCCCCCCCCCCCCCHHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCEE
ELSTWTLTPEGHCRHCGTPLPGRFEAAPGTWGRKRQPVRFRR
EEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]