| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312759
Identifier: 83312759
GI number: 83312759
Start: 4022680
End: 4024194
Strand: Reverse
Name: 83312759
Synonym: amb3660
Alternate gene names: NA
Gene position: 4024194-4022680 (Counterclockwise)
Preceding gene: 83312760
Following gene: 83312756
Centisome position: 81.02
GC content: 63.17
Gene sequence:
>1515_bases ATGCCCAGTCTGCTACTGATCAATCCGAGGTTCCCCGAAAGCTTCTGGAGCTTCAGATGGGCCATTGATCATGTGTTGCC GGGCAAGAAGGCGGTGAATCCCCCCCTCGGCCTGGCAACGCTGGCGGCGCTGTGCCCCGCCCTTTGGCGGGTCGAGATCA TCGACGAAAACATCGAACCGATTCCCCCGACCACCGACGCCGACATCGTCGGTGTATGCGGTATGGGCGTTCAGTTCGAG CGCCAGCGGGAATTGCTGGCCCATTACCGCGACCAAGGCCATTACGTGGTTGCGGGCGGCAGCTACGCCTCGCTGTGTCC CGATGAGTATACCGAGGCGGCCGACACGGTGGTGGCCGGCGAGGCCGAATACGTGTGGCCGGAATTCTGCCGCGACTTCG AGGCAGGGACACCAAAGCCCCTGTACCACGAGACCGGAACGGTGGCGTTAGCGGACACTCCGGTTCCCCGCTACGATTTG CTTCGCCTAGGGGCCTATTCCAACGTCACCCTCCAGTTCTCGCGCGGCTGTCCCTTCCGGTGCGAGTTCTGCGACATCAT CGTGATGTTTGGCCGGCGCCCCCGGGTCAAGGACCTGGATCAGATCGAGAAGGAGTTGGATCAGTTGCGCCGCTTCGGCG CCCGCAGCGTATTTTTCGTCGACGACAACCTGATCGGCAATCCGAAGGAGGCCAAGGACCTGCTGCGTTTCCTGGCCGAG TACCAGCGGCATCACGGCTACATGTTCAGCTTCGGCACCGAGGCGTCGCTCAACATGGCCCAGGACGACGAATTGCTGGA GCTGTTCCGCGCCGCCAATTTCGGCTGGGTGTTCATCGGCATCGAGACGACCGATCCGGTGGGGTTGAAGGAAACCGGCA AGACCCAGAACCTGCGGGAAGACACCCTGACGGCCATCCGGCGCATCTATTCCCACGGCATCGATGTGCTGGGCGGGTTT ATCATCGGCTTCGACCACGACACCCTGGACACCTTCGAGCATCAGTACCGCTTCATCACTGACGCCGGAATCCAGTCGGC CATGATCGGTCTGCTCATGGCGCTGCCGCGTACCCCGCTGCACGCGCGGATGGAGCGGGAAGGCCGCCTGCTGCCCGTCG AAAGACATTCGGACAACACCAGCCTGACCACCAACATCGTGCCGAAATGCATGACCGCCGAAGCCATGGCGGCGGGCTAC CAGATGCTTTACGGCCGCCTGCTCACCGGCCCGGAAATCGGGCGGCGTATCCGCAACAAGGCGGCGTATCTGCGCGTCCC GGTCTATGGCAGCGGCTATCCCATGGGCCAGCGGGTCGGTATCGTCGTCCGCCTGCTGGTCAGGGGCATCCTGTCGGGGG GGCTTACGACCATGGTGCCGTTCCTGCGCAGCTTCCCCTTCCTCACGCCGTCACGCATTCCCATGGTTATTTCCGACTGG ATCATCGGCCTGTCCATGAAAGCCTTCGCCGAACGGCACCTGACAGGTACCGCCCGGCGGCGGGAGGCGGACTGA
Upstream 100 bases:
>100_bases TCAAGGTGGGCGGGCGCGAGCGGATACGCAGCGACACCCTTGAAGTGATACTCCCCTTCTTCAGCAGCGCGTTGCCGGAG TAAGGGAACAGGAGACGCGG
Downstream 100 bases:
>100_bases ATCCGGGCTTATTCCGGCTTTGGCGGCGGCGGGCCGGTGACGCGGGGCGGCTTCTTACCCATACGGCTGTCGTCGGTAAA GAGCGATGCCGCTTGCGACG
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: ORF N [H]
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MPSLLLINPRFPESFWSFRWAIDHVLPGKKAVNPPLGLATLAALCPALWRVEIIDENIEPIPPTTDADIVGVCGMGVQFE RQRELLAHYRDQGHYVVAGGSYASLCPDEYTEAADTVVAGEAEYVWPEFCRDFEAGTPKPLYHETGTVALADTPVPRYDL LRLGAYSNVTLQFSRGCPFRCEFCDIIVMFGRRPRVKDLDQIEKELDQLRRFGARSVFFVDDNLIGNPKEAKDLLRFLAE YQRHHGYMFSFGTEASLNMAQDDELLELFRAANFGWVFIGIETTDPVGLKETGKTQNLREDTLTAIRRIYSHGIDVLGGF IIGFDHDTLDTFEHQYRFITDAGIQSAMIGLLMALPRTPLHARMEREGRLLPVERHSDNTSLTTNIVPKCMTAEAMAAGY QMLYGRLLTGPEIGRRIRNKAAYLRVPVYGSGYPMGQRVGIVVRLLVRGILSGGLTTMVPFLRSFPFLTPSRIPMVISDW IIGLSMKAFAERHLTGTARRREAD
Sequences:
>Translated_504_residues MPSLLLINPRFPESFWSFRWAIDHVLPGKKAVNPPLGLATLAALCPALWRVEIIDENIEPIPPTTDADIVGVCGMGVQFE RQRELLAHYRDQGHYVVAGGSYASLCPDEYTEAADTVVAGEAEYVWPEFCRDFEAGTPKPLYHETGTVALADTPVPRYDL LRLGAYSNVTLQFSRGCPFRCEFCDIIVMFGRRPRVKDLDQIEKELDQLRRFGARSVFFVDDNLIGNPKEAKDLLRFLAE YQRHHGYMFSFGTEASLNMAQDDELLELFRAANFGWVFIGIETTDPVGLKETGKTQNLREDTLTAIRRIYSHGIDVLGGF IIGFDHDTLDTFEHQYRFITDAGIQSAMIGLLMALPRTPLHARMEREGRLLPVERHSDNTSLTTNIVPKCMTAEAMAAGY QMLYGRLLTGPEIGRRIRNKAAYLRVPVYGSGYPMGQRVGIVVRLLVRGILSGGLTTMVPFLRSFPFLTPSRIPMVISDW IIGLSMKAFAERHLTGTARRREAD >Mature_503_residues PSLLLINPRFPESFWSFRWAIDHVLPGKKAVNPPLGLATLAALCPALWRVEIIDENIEPIPPTTDADIVGVCGMGVQFER QRELLAHYRDQGHYVVAGGSYASLCPDEYTEAADTVVAGEAEYVWPEFCRDFEAGTPKPLYHETGTVALADTPVPRYDLL RLGAYSNVTLQFSRGCPFRCEFCDIIVMFGRRPRVKDLDQIEKELDQLRRFGARSVFFVDDNLIGNPKEAKDLLRFLAEY QRHHGYMFSFGTEASLNMAQDDELLELFRAANFGWVFIGIETTDPVGLKETGKTQNLREDTLTAIRRIYSHGIDVLGGFI IGFDHDTLDTFEHQYRFITDAGIQSAMIGLLMALPRTPLHARMEREGRLLPVERHSDNTSLTTNIVPKCMTAEAMAAGYQ MLYGRLLTGPEIGRRIRNKAAYLRVPVYGSGYPMGQRVGIVVRLLVRGILSGGLTTMVPFLRSFPFLTPSRIPMVISDWI IGLSMKAFAERHLTGTARRREAD
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 56672; Mature: 56541
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLLLINPRFPESFWSFRWAIDHVLPGKKAVNPPLGLATLAALCPALWRVEIIDENIEP CCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCC IPPTTDADIVGVCGMGVQFERQRELLAHYRDQGHYVVAGGSYASLCPDEYTEAADTVVAG CCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHCCCHHHHHHHHHEEEC EAEYVWPEFCRDFEAGTPKPLYHETGTVALADTPVPRYDLLRLGAYSNVTLQFSRGCPFR CCCCCCHHHHHHCCCCCCCCCEECCCEEEEECCCCCHHHHHHCCCCCCEEEEECCCCCCE CEFCDIIVMFGRRPRVKDLDQIEKELDQLRRFGARSVFFVDDNLIGNPKEAKDLLRFLAE EHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHH YQRHHGYMFSFGTEASLNMAQDDELLELFRAANFGWVFIGIETTDPVGLKETGKTQNLRE HHHHCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHH DTLTAIRRIYSHGIDVLGGFIIGFDHDTLDTFEHQYRFITDAGIQSAMIGLLMALPRTPL HHHHHHHHHHHCCHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH HARMEREGRLLPVERHSDNTSLTTNIVPKCMTAEAMAAGYQMLYGRLLTGPEIGRRIRNK HHHHHCCCCEEEEECCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC AAYLRVPVYGSGYPMGQRVGIVVRLLVRGILSGGLTTMVPFLRSFPFLTPSRIPMVISDW CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHH IIGLSMKAFAERHLTGTARRREAD HHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure PSLLLINPRFPESFWSFRWAIDHVLPGKKAVNPPLGLATLAALCPALWRVEIIDENIEP CCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCC IPPTTDADIVGVCGMGVQFERQRELLAHYRDQGHYVVAGGSYASLCPDEYTEAADTVVAG CCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHCCCHHHHHHHHHEEEC EAEYVWPEFCRDFEAGTPKPLYHETGTVALADTPVPRYDLLRLGAYSNVTLQFSRGCPFR CCCCCCHHHHHHCCCCCCCCCEECCCEEEEECCCCCHHHHHHCCCCCCEEEEECCCCCCE CEFCDIIVMFGRRPRVKDLDQIEKELDQLRRFGARSVFFVDDNLIGNPKEAKDLLRFLAE EHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHH YQRHHGYMFSFGTEASLNMAQDDELLELFRAANFGWVFIGIETTDPVGLKETGKTQNLRE HHHHCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHH DTLTAIRRIYSHGIDVLGGFIIGFDHDTLDTFEHQYRFITDAGIQSAMIGLLMALPRTPL HHHHHHHHHHHCCHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH HARMEREGRLLPVERHSDNTSLTTNIVPKCMTAEAMAAGYQMLYGRLLTGPEIGRRIRNK HHHHHCCCCEEEEECCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC AAYLRVPVYGSGYPMGQRVGIVVRLLVRGILSGGLTTMVPFLRSFPFLTPSRIPMVISDW CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHH IIGLSMKAFAERHLTGTARRREAD HHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231; 8467083 [H]