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The map label for this gene is flgH

Identifier: 83312592

GI number: 83312592

Start: 3839604

End: 3840395

Strand: Reverse

Name: flgH

Synonym: amb3493

Alternate gene names: 83312592

Gene position: 3840395-3839604 (Counterclockwise)

Preceding gene: 83312593

Following gene: 83312587

Centisome position: 77.32

GC content: 65.66

Gene sequence:

>792_bases
ATGTCCACCCCCTCCGCCTCCCGCCTGTTCGGCCGCAAGACCCTGCGGGCCCTGGCCCTGGTCGCCGCCATGTCCGAGCT
GTCGGCCTGCAACATGCTGACCCGCATGTCGGAAGTGGGCTCCGGCCCGCAGACCTCGCCCATTCAGAATCCGACCCAGA
AGTCGGGCTACCAGCCGGTCAGCATGCCCATGCCGCAGCCCTCGGCCCCGCCGCAGAACGCCAACTCCCTGTGGCGGCCC
GGCGCCCGGGCTTTCTTCAAGGATCAGCGCGCCAAGGACGTGGGCGACATCCTGACCGTGGCGGTGTCCATCGCCGACAG
CGCCACCCTGACCACCGGCCTGACCAACTCGCGGACCGGCTCGGAAAAGGCCGGCTCGGGTACCACCGGCTCGCCCATCT
CGGCCATGGGCTTCGAACAGCAATTGTCCAAGCTGCTGCCCAACATCAACCTGGCCAGCCTGGCCGACCTGTCGTCGACC
TCGGCGGTGACCAATTCCGGCAATACCACCCGGACGGAAAGCATCACCATGAGCATGGCGGCGGTGATCACCCAGGTGCT
GCCCAACGGCAATCTGGTGATTTCCGGCCGCCAGGAGTTCCGGGTGAACTACGAAATGCGCGAATTGTCCATTCAGGGCA
TCATCCGGCCCGAGGACATCAGCTCGTCCAACTCGGTCAGCTCGGAAAAGATTGCCGAGGCCCGCGTCTATTACGGCGGC
CGCGGCATGGTCAGCGATCTGACCCAGCCGCGCTACGGCCAGCAGATCTTCGACATCATCTTCCCGTTCTGA

Upstream 100 bases:

>100_bases
CCGTCGACGCCAAAATCGAAGGCCCCGGCCAGGTGTCGGTGATGCCCGGCGGGCTTCGCACCCTGGCCAACAACTGAGCC
GTATTCGGGAGAGATCGATC

Downstream 100 bases:

>100_bases
TCGGACGCTTTTCCCAGGAAGGCCCGCCGGAGACACCTCCGGCGGGCCTTCGGCATTTTTTGCCGGGCGGGAGGGGGGCG
CGGATTCTCAATCTGTCATC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSTPSASRLFGRKTLRALALVAAMSELSACNMLTRMSEVGSGPQTSPIQNPTQKSGYQPVSMPMPQPSAPPQNANSLWRP
GARAFFKDQRAKDVGDILTVAVSIADSATLTTGLTNSRTGSEKAGSGTTGSPISAMGFEQQLSKLLPNINLASLADLSST
SAVTNSGNTTRTESITMSMAAVITQVLPNGNLVISGRQEFRVNYEMRELSIQGIIRPEDISSSNSVSSEKIAEARVYYGG
RGMVSDLTQPRYGQQIFDIIFPF

Sequences:

>Translated_263_residues
MSTPSASRLFGRKTLRALALVAAMSELSACNMLTRMSEVGSGPQTSPIQNPTQKSGYQPVSMPMPQPSAPPQNANSLWRP
GARAFFKDQRAKDVGDILTVAVSIADSATLTTGLTNSRTGSEKAGSGTTGSPISAMGFEQQLSKLLPNINLASLADLSST
SAVTNSGNTTRTESITMSMAAVITQVLPNGNLVISGRQEFRVNYEMRELSIQGIIRPEDISSSNSVSSEKIAEARVYYGG
RGMVSDLTQPRYGQQIFDIIFPF
>Mature_262_residues
STPSASRLFGRKTLRALALVAAMSELSACNMLTRMSEVGSGPQTSPIQNPTQKSGYQPVSMPMPQPSAPPQNANSLWRPG
ARAFFKDQRAKDVGDILTVAVSIADSATLTTGLTNSRTGSEKAGSGTTGSPISAMGFEQQLSKLLPNINLASLADLSSTS
AVTNSGNTTRTESITMSMAAVITQVLPNGNLVISGRQEFRVNYEMRELSIQGIIRPEDISSSNSVSSEKIAEARVYYGGR
GMVSDLTQPRYGQQIFDIIFPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=208, Percent_Identity=28.3653846153846, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 28033; Mature: 27902

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPSASRLFGRKTLRALALVAAMSELSACNMLTRMSEVGSGPQTSPIQNPTQKSGYQPV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC
SMPMPQPSAPPQNANSLWRPGARAFFKDQRAKDVGDILTVAVSIADSATLTTGLTNSRTG
CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
SEKAGSGTTGSPISAMGFEQQLSKLLPNINLASLADLSSTSAVTNSGNTTRTESITMSMA
CCCCCCCCCCCCCHHHCHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCCCHHHHHHHHH
AVITQVLPNGNLVISGRQEFRVNYEMRELSIQGIIRPEDISSSNSVSSEKIAEARVYYGG
HHHHHHCCCCCEEEECCHHEEECHHHHEEHHHCCCCCCCCCCCCCCCHHHHHHHHEEECC
RGMVSDLTQPRYGQQIFDIIFPF
CCHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
STPSASRLFGRKTLRALALVAAMSELSACNMLTRMSEVGSGPQTSPIQNPTQKSGYQPV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC
SMPMPQPSAPPQNANSLWRPGARAFFKDQRAKDVGDILTVAVSIADSATLTTGLTNSRTG
CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
SEKAGSGTTGSPISAMGFEQQLSKLLPNINLASLADLSSTSAVTNSGNTTRTESITMSMA
CCCCCCCCCCCCCHHHCHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCCCHHHHHHHHH
AVITQVLPNGNLVISGRQEFRVNYEMRELSIQGIIRPEDISSSNSVSSEKIAEARVYYGG
HHHHHHCCCCCEEEECCHHEEECHHHHEEHHHCCCCCCCCCCCCCCCHHHHHHHHEEECC
RGMVSDLTQPRYGQQIFDIIFPF
CCHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA