| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yfeJ [H]
Identifier: 83312572
GI number: 83312572
Start: 3815942
End: 3816643
Strand: Reverse
Name: yfeJ [H]
Synonym: amb3473
Alternate gene names: 83312572
Gene position: 3816643-3815942 (Counterclockwise)
Preceding gene: 83312573
Following gene: 83312571
Centisome position: 76.84
GC content: 69.09
Gene sequence:
>702_bases ATGAAGACCTGTGTCGCCATTCGCCATGTGGCGTTCGAGGACCTGGGCAGCTTTCAGGCGCCGCTGGAGGCCGCCGGCTA TGCCATCCGCTATGCCGAGGCGGGCCTCGATGACCTGGCCGCCCTCTCGGAGGCGTCCACGGACCTGCTGGTGGTCCTGG GCGGCCCCATCGGCGCCTACGAGGACGGCAACTACCCCTTTCTGGCCCCTGAGCTGCGGCTGATCGAGGCGCGGCTGCGG GCCGGGCGTCCCACCATCGGCATCTGCCTGGGAGCCCAACTGATGGCGCGCGCCCTGGGCGCCCGCGTCTATTCCAACAA CGGCGTCAAGGAAATCGGCTGGTCGGCCCTGGATCTGACCGGGGCGGGGCTGACGTCGCCCCTGGCGTCCCTGGACGGCG TTCCGGTGCTGCACTGGCACGGCGACACCTTCGACCTGCCCGAGGGCGCCGCGCTGCTGGCCTCCACCGCCGTCACCCGC AACCAGGCGTTTTCCTGGGGCAAGGCCGCTCTGGGCCTGCAATTTCATGTGGAGGCCACCGGGGCAGGGCTGGAGCGCTG GTATATCGGCCATGCCTGTGAGATCGGCTCGGTGCCGGGCCTGTCGGTGCCTCGATTGCGCGCCGACGCGGCCCGTCACG CCGCCGGGCTGGAATTGGTCGCCCCGAAGGTGCTGAGTGCGTTTTTGTCTGATATGATGTAA
Upstream 100 bases:
>100_bases AAGTCAGCCTCGACGCCGGAGGCCCGCTCGGGTATGAAGGGGCCTCGGCCTGGGAGGGCTGGGGCCTGGGAGGGCCGATC GCGGTTTCCGGCGGGGGATG
Downstream 100 bases:
>100_bases CCGGCGTCGCCTCGGGTTCCCGCCTGTTCAGGGCGGATGAAGCGATGTATAGTCCGCCGAAAGGGGCATAGAGAAGACAG CCGTGGACCAGAAGCTCAAC
Product: glutamine amidotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MKTCVAIRHVAFEDLGSFQAPLEAAGYAIRYAEAGLDDLAALSEASTDLLVVLGGPIGAYEDGNYPFLAPELRLIEARLR AGRPTIGICLGAQLMARALGARVYSNNGVKEIGWSALDLTGAGLTSPLASLDGVPVLHWHGDTFDLPEGAALLASTAVTR NQAFSWGKAALGLQFHVEATGAGLERWYIGHACEIGSVPGLSVPRLRADAARHAAGLELVAPKVLSAFLSDMM
Sequences:
>Translated_233_residues MKTCVAIRHVAFEDLGSFQAPLEAAGYAIRYAEAGLDDLAALSEASTDLLVVLGGPIGAYEDGNYPFLAPELRLIEARLR AGRPTIGICLGAQLMARALGARVYSNNGVKEIGWSALDLTGAGLTSPLASLDGVPVLHWHGDTFDLPEGAALLASTAVTR NQAFSWGKAALGLQFHVEATGAGLERWYIGHACEIGSVPGLSVPRLRADAARHAAGLELVAPKVLSAFLSDMM >Mature_233_residues MKTCVAIRHVAFEDLGSFQAPLEAAGYAIRYAEAGLDDLAALSEASTDLLVVLGGPIGAYEDGNYPFLAPELRLIEARLR AGRPTIGICLGAQLMARALGARVYSNNGVKEIGWSALDLTGAGLTSPLASLDGVPVLHWHGDTFDLPEGAALLASTAVTR NQAFSWGKAALGLQFHVEATGAGLERWYIGHACEIGSVPGLSVPRLRADAARHAAGLELVAPKVLSAFLSDMM
Specific function: Unknown
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: NA
Molecular weight: Translated: 24392; Mature: 24392
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTCVAIRHVAFEDLGSFQAPLEAAGYAIRYAEAGLDDLAALSEASTDLLVVLGGPIGAY CCHHHHHHHHHHHHHCCCCCCHHHHCEEEEEHHCCHHHHHHHHCCCCCEEEEECCCCCCC EDGNYPFLAPELRLIEARLRAGRPTIGICLGAQLMARALGARVYSNNGVKEIGWSALDLT CCCCCCEECHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEC GAGLTSPLASLDGVPVLHWHGDTFDLPEGAALLASTAVTRNQAFSWGKAALGLQFHVEAT CCCCCCHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEC GAGLERWYIGHACEIGSVPGLSVPRLRADAARHAAGLELVAPKVLSAFLSDMM CCCCHHEEECCEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTCVAIRHVAFEDLGSFQAPLEAAGYAIRYAEAGLDDLAALSEASTDLLVVLGGPIGAY CCHHHHHHHHHHHHHCCCCCCHHHHCEEEEEHHCCHHHHHHHHCCCCCEEEEECCCCCCC EDGNYPFLAPELRLIEARLRAGRPTIGICLGAQLMARALGARVYSNNGVKEIGWSALDLT CCCCCCEECHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEC GAGLTSPLASLDGVPVLHWHGDTFDLPEGAALLASTAVTRNQAFSWGKAALGLQFHVEAT CCCCCCHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEC GAGLERWYIGHACEIGSVPGLSVPRLRADAARHAAGLELVAPKVLSAFLSDMM CCCCHHEEECCEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]