| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312570
Identifier: 83312570
GI number: 83312570
Start: 3813549
End: 3814715
Strand: Reverse
Name: 83312570
Synonym: amb3471
Alternate gene names: NA
Gene position: 3814715-3813549 (Counterclockwise)
Preceding gene: 83312571
Following gene: 83312567
Centisome position: 76.8
GC content: 63.32
Gene sequence:
>1167_bases ATGTCCGGCAGCGCGAAGCCCGCGGCCAAGCCGCTCGACAAGGACGCGGCCAACCGCAAGGAAATCATCGCCACCATCAA GGGGCCGGTGACCGCCCGGGTCACCCAGCTGATCCCCGCGCTGGCGGCGTTTCCCAATCCCTATGCCGCCGTGCTGGCCA CCCCGGACCTGCTTTACGCCTGCATGCAGCTGGTCAAGACCAAGCGCGAGCAGTTCCAGGACCTGCTGATCGACCGGAAT GGCGACCCGGTCACCACCGATGACGGCATGCTGCGCTGCGAGCGCTCGCTCAATCAGGTGATTTCCATGGTGGTGCGCTC CGGCGCCAAGGCCTATGCGGAAAAGCGCTTCGGCACCGCCGACAAGCCCGCCGCGCCGGTGGCTCCCAAGAAGGAGCCCA AGACCCTGCTGGAGAAGATCCAGTCCCTGGTGTCGGGCAAGTGGGGCGACATGGAAGTCCCCAAGTCGTCACCCACCCAG GCCGACCAGTTCTATGGTGCCATCAAGGATTACCTGGACTACGACTGGCAGGTGCCGCTGATCCCCTGCTTCGCCGAACT GCCGGTCAAGCTGATCCGCGAGATGGGCCTGGGCGTCACCACGCTGCGCACGCCGGAGGGCATCGCCGCCCTGGCCGATA TCGGCCGCCACTCCATGGATTCGGCCAAGCGCATCCTGTCGGACGCCATGATGCGCGAAATGCTCGATACCCAGCCCCTC GCCGCCAAGGGCGTCGCTTTCCTGGGCAAGGACCGCTACGACTACCTGCACGGCACCGTCTACGACAAGATGGGCGAGAA ATTCTGGGAAATGTGCGTCGATTGCGACCGTCTGGAAGCCATGGAGGTCCAGAACGCCAAGGACCTGGAGCAGTTGGCCA GCCACCTGCACATCCTGTCGGGCGAGGCCATCAACCAGATCGTGCGCTTCCTCAATTACTCGCAGATTCCGATCTTCCTG GAAATCGGCACGGAAAAGCTGGGCGAGGAAAAGTTCACCGAGATCTTCGGCGTGCCCGGCAACAAGAAGCTGATCAAGAT CTTCTGCGAGAAGATCAAGCTGTGGAAGCTGGACCAGGAAGATCCGGATTCCGATCTGCGCGCCAAGCTGCCCGACGTGT TCGGGGCCTATCTGCGCGCCCCCGCCGACTTCGAAAAGGGGTTGTAG
Upstream 100 bases:
>100_bases TTCGAGAACGACGACCTGGAATATCTGCTGTCCAAGATGAATCAATTGCCGGCCACCATGCTCGGCGAGTGACGTCGGGA CCATTCACAAGGGGAATACC
Downstream 100 bases:
>100_bases GCCTTCGGGCCGGGGCGGGGGAGGTCTTCGGCCCGCCGCCACGACGCCGGCACCGTTGCTACGGCCGGTTGGCGGGCAAG CGCATCAGTCCGAACCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSGSAKPAAKPLDKDAANRKEIIATIKGPVTARVTQLIPALAAFPNPYAAVLATPDLLYACMQLVKTKREQFQDLLIDRN GDPVTTDDGMLRCERSLNQVISMVVRSGAKAYAEKRFGTADKPAAPVAPKKEPKTLLEKIQSLVSGKWGDMEVPKSSPTQ ADQFYGAIKDYLDYDWQVPLIPCFAELPVKLIREMGLGVTTLRTPEGIAALADIGRHSMDSAKRILSDAMMREMLDTQPL AAKGVAFLGKDRYDYLHGTVYDKMGEKFWEMCVDCDRLEAMEVQNAKDLEQLASHLHILSGEAINQIVRFLNYSQIPIFL EIGTEKLGEEKFTEIFGVPGNKKLIKIFCEKIKLWKLDQEDPDSDLRAKLPDVFGAYLRAPADFEKGL
Sequences:
>Translated_388_residues MSGSAKPAAKPLDKDAANRKEIIATIKGPVTARVTQLIPALAAFPNPYAAVLATPDLLYACMQLVKTKREQFQDLLIDRN GDPVTTDDGMLRCERSLNQVISMVVRSGAKAYAEKRFGTADKPAAPVAPKKEPKTLLEKIQSLVSGKWGDMEVPKSSPTQ ADQFYGAIKDYLDYDWQVPLIPCFAELPVKLIREMGLGVTTLRTPEGIAALADIGRHSMDSAKRILSDAMMREMLDTQPL AAKGVAFLGKDRYDYLHGTVYDKMGEKFWEMCVDCDRLEAMEVQNAKDLEQLASHLHILSGEAINQIVRFLNYSQIPIFL EIGTEKLGEEKFTEIFGVPGNKKLIKIFCEKIKLWKLDQEDPDSDLRAKLPDVFGAYLRAPADFEKGL >Mature_387_residues SGSAKPAAKPLDKDAANRKEIIATIKGPVTARVTQLIPALAAFPNPYAAVLATPDLLYACMQLVKTKREQFQDLLIDRNG DPVTTDDGMLRCERSLNQVISMVVRSGAKAYAEKRFGTADKPAAPVAPKKEPKTLLEKIQSLVSGKWGDMEVPKSSPTQA DQFYGAIKDYLDYDWQVPLIPCFAELPVKLIREMGLGVTTLRTPEGIAALADIGRHSMDSAKRILSDAMMREMLDTQPLA AKGVAFLGKDRYDYLHGTVYDKMGEKFWEMCVDCDRLEAMEVQNAKDLEQLASHLHILSGEAINQIVRFLNYSQIPIFLE IGTEKLGEEKFTEIFGVPGNKKLIKIFCEKIKLWKLDQEDPDSDLRAKLPDVFGAYLRAPADFEKGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43155; Mature: 43024
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSAKPAAKPLDKDAANRKEIIATIKGPVTARVTQLIPALAAFPNPYAAVLATPDLLYA CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHH CMQLVKTKREQFQDLLIDRNGDPVTTDDGMLRCERSLNQVISMVVRSGAKAYAEKRFGTA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DKPAAPVAPKKEPKTLLEKIQSLVSGKWGDMEVPKSSPTQADQFYGAIKDYLDYDWQVPL CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH IPCFAELPVKLIREMGLGVTTLRTPEGIAALADIGRHSMDSAKRILSDAMMREMLDTQPL HHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AAKGVAFLGKDRYDYLHGTVYDKMGEKFWEMCVDCDRLEAMEVQNAKDLEQLASHLHILS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHC GEAINQIVRFLNYSQIPIFLEIGTEKLGEEKFTEIFGVPGNKKLIKIFCEKIKLWKLDQE CHHHHHHHHHHCCCCCEEEEEECCHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC DPDSDLRAKLPDVFGAYLRAPADFEKGL CCCCHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure SGSAKPAAKPLDKDAANRKEIIATIKGPVTARVTQLIPALAAFPNPYAAVLATPDLLYA CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHH CMQLVKTKREQFQDLLIDRNGDPVTTDDGMLRCERSLNQVISMVVRSGAKAYAEKRFGTA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DKPAAPVAPKKEPKTLLEKIQSLVSGKWGDMEVPKSSPTQADQFYGAIKDYLDYDWQVPL CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH IPCFAELPVKLIREMGLGVTTLRTPEGIAALADIGRHSMDSAKRILSDAMMREMLDTQPL HHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AAKGVAFLGKDRYDYLHGTVYDKMGEKFWEMCVDCDRLEAMEVQNAKDLEQLASHLHILS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHC GEAINQIVRFLNYSQIPIFLEIGTEKLGEEKFTEIFGVPGNKKLIKIFCEKIKLWKLDQE CHHHHHHHHHHCCCCCEEEEEECCHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC DPDSDLRAKLPDVFGAYLRAPADFEKGL CCCCHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA