| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312529
Identifier: 83312529
GI number: 83312529
Start: 3756685
End: 3757161
Strand: Reverse
Name: 83312529
Synonym: amb3430
Alternate gene names: NA
Gene position: 3757161-3756685 (Counterclockwise)
Preceding gene: 83312530
Following gene: 83312528
Centisome position: 75.64
GC content: 64.36
Gene sequence:
>477_bases ATGGCCTTCAACCCCGCATCCCCCACCATCGCCAATCTCGAAGCGGCCTTCGCCGGCGAGTCCATGGCCAACCGCAAGTA TCTCTACTTCGCCCGCCGGGCGCGCGAACTGGGCGCCGTCGAGGTGGCCGAGGTCTTCGAGCGCACCGCCGAGCAGGAGA CCATGCACGCCTTCGGGCATCTTGAACTGCTCTATCCCAAGGCCGAACTGACGGTCGAGAAGATGTTGCAGATGGCCATC GACGGCGAGACCTACGAGTACACTGAGATGTACCCCAAGTTCCGTCATCTGGCCGAGCAGGAGGGCAACAAAGCCGCCGT CGCCGAAATGGACGGGCAGATCGCCGAGTCCAAGGAACACGCCGAGCGCTTCGCCAAGATCCTGGCCACCGCCGCCAAGC GCTTCGCCGCCCTGGCAAAGGTCGAGGAAAAGCATGCCGGCCACTACCAGGCCACCCTGGACGCCCACAAGGGCTGA
Upstream 100 bases:
>100_bases ATCGACTGAGTCGATTTCAAAAACAGCTTTAACTCGTTTCATTCGATCAGTTTGTTTCTGTAGGGTTTCTCCATCGGATC ACACCAAGGAGATGACCCCA
Downstream 100 bases:
>100_bases GCGGCAACGCAAGGAGACCGATGATGAGCGATGATCAAATCTGGATCTGTGTGATCTGCGGCCTGGTCTATGACCCCGTC CTCGGTCTGCCCGAGGACGG
Product: putative rubrerythrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MAFNPASPTIANLEAAFAGESMANRKYLYFARRARELGAVEVAEVFERTAEQETMHAFGHLELLYPKAELTVEKMLQMAI DGETYEYTEMYPKFRHLAEQEGNKAAVAEMDGQIAESKEHAERFAKILATAAKRFAALAKVEEKHAGHYQATLDAHKG
Sequences:
>Translated_158_residues MAFNPASPTIANLEAAFAGESMANRKYLYFARRARELGAVEVAEVFERTAEQETMHAFGHLELLYPKAELTVEKMLQMAI DGETYEYTEMYPKFRHLAEQEGNKAAVAEMDGQIAESKEHAERFAKILATAAKRFAALAKVEEKHAGHYQATLDAHKG >Mature_157_residues AFNPASPTIANLEAAFAGESMANRKYLYFARRARELGAVEVAEVFERTAEQETMHAFGHLELLYPKAELTVEKMLQMAID GETYEYTEMYPKFRHLAEQEGNKAAVAEMDGQIAESKEHAERFAKILATAAKRFAALAKVEEKHAGHYQATLDAHKG
Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]
COG id: COG1592
COG function: function code C; Rubrerythrin
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rubredoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR004039 - InterPro: IPR003251 [H]
Pfam domain/function: PF02915 Rubrerythrin [H]
EC number: NA
Molecular weight: Translated: 17682; Mature: 17551
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFNPASPTIANLEAAFAGESMANRKYLYFARRARELGAVEVAEVFERTAEQETMHAFGH CCCCCCCCCHHHHHHHHCCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LELLYPKAELTVEKMLQMAIDGETYEYTEMYPKFRHLAEQEGNKAAVAEMDGQIAESKEH HHEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHCCHHHHHHHH AERFAKILATAAKRFAALAKVEEKHAGHYQATLDAHKG HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC >Mature Secondary Structure AFNPASPTIANLEAAFAGESMANRKYLYFARRARELGAVEVAEVFERTAEQETMHAFGH CCCCCCCCHHHHHHHHCCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LELLYPKAELTVEKMLQMAIDGETYEYTEMYPKFRHLAEQEGNKAAVAEMDGQIAESKEH HHEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHCCHHHHHHHH AERFAKILATAAKRFAALAKVEEKHAGHYQATLDAHKG HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]