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The map label for this gene is yhgF [H]

Identifier: 83312516

GI number: 83312516

Start: 3712418

End: 3714781

Strand: Reverse

Name: yhgF [H]

Synonym: amb3417

Alternate gene names: 83312516

Gene position: 3714781-3712418 (Counterclockwise)

Preceding gene: 83312518

Following gene: 83312515

Centisome position: 74.79

GC content: 68.53

Gene sequence:

>2364_bases
ATGACCCTGTCCCTTCCCGTCGCGACCCTGGCCGCCATCACCAACCGCATCGCCCTTGAACTGGGGGTCAAGCCCTCGCA
GGTGGCGGCGACGGTCCAGATGCTGGACGAAGGCGCGACGGTGCCGTTCATCGCCCGCTATCGCAAGGAGGCCACCGACG
GCCTGGACGACACCCAGCTGCGCAATCTGGAAGAGCGCCTGGGCTATCTGCGCGAACTGGAAGACCGCCGGGCGGCCATT
CTTCGCTCCATCGAGGAGCAGGGCAAGCTGACCCCGGACCTGGCGGGCCAGATCGGCGAGGCCGACAGCAAGGCGCGGCT
GGAAGATCTGTACCTGCCCTACAAGCCCAAGCGCCGCACCAAGGCCCAGATCGCCCGCGAGGCGGGTCTAGAGCCCCTGG
CCGACGCGCTGCTGGCCGATCCCGCCCTGGTTCCCGAGCAGGCCGCCGAGCCCTATGTGGATGCCGAGAAGGGCGTCGCC
GACGTCAAGGCCGCCCTGGACGGGGCGCGCCAGATCCTGATGGAGCGCTTCGCCGAGGATGCCGAACTGCTGGGTAACCT
GCGCGACGCCCTGTGGGATGGCGGTGTGCTGATCTCGACGGTGGCCGAGGGCAAGTCCGAGGCGGGGGCCAAATTCTCCG
ACTATTTCGACTACCGCGAGGCCATCAAGGCTATTCCGTCCCATCGCGCCCTGGCGCTGTTCCGGGGGCGCAACGAAAAC
GTTCTGAATCTGAAACTGCTGACTCCCGACGAGGCGGCACGGCCGGACGGCACGGTTTCCCAAGGCCCCGGCGAGTTCGA
GGCGCGCATCGCCCGGCGCTTTTCCGTCCGCGACCTGAAGCGTCCCGCCGATTCCTGGCTGGCCGAGACGGTGCGCTGGG
CCTGGCGCATCAAGATACATCTGCATTTGGAGTTAGAGCTGATGAGCCGCCTGCGCGAGGCGGCCGAGGCCGAGGCCATC
AACGTCTTCGCCCGCAACCTGCGCGCCCTGCTGCTGCAGGCCCCGGCCGGAGCCCGGAACTGCATCGGCCTCGACCCCGG
CATCCGCACCGGCGTCAAGGTGGCGGTGACCGACGCCACCGGCAAGGTGGTGGAGACCGCCACCATCTATCCCCACCAGC
CCAGGAACGACTGGCAGGGCTCGGTGGCGGCCATCGCCCATCTGGCCCGCAAGCACGGCATCAAGCTGGTGGCCATCGGC
AACGGCACAGCCTCGCGCGAGACCGATCGCCTGGTCATCGACGTGATGAAGCGCCACCCCGATCTGGGGCTGGAAAAGCT
GGTGGTCAGCGAGGCCGGCGCCTCGGTCTATTCGGCGTCGGAACTGGCCGCCAAGGAATTCCCCGATCTCGACGTCTCCC
TGCGCGGCGCGGTGTCCATCGCCCGGCGCCTGCAGGACCCGCTGGCCGAGCTGGTCAAGATCGACCCCAAGGCCATCGGC
GTCGGCCAGTACCAGCACGACGTGGATCAGGTGAAGCTGGGCCGCTCCCTCGACGCCGTGGTGGAGGATTGCGTCAACGC
CGTGGGCGTCGAGGTCAATACCGCCTCGGCGCCGCTGCTGGCCCGGGTGGCCGGGCTTTCCCCCACCGTGGCCCGCAACG
TGGTGGAATTCCGCGACCGCTTCGGCCCCTTCGCCTCGCGCGAGGCCTTGAAGCAGGTGGAGCGCCTGGGCGCCAAGGCC
TTCGAACAGGCGGCCGGCTTCCTGCGGGTGGTGGGCGGCGTCAATCCTCTGGATTCCTCTGCGGTGCACCCCGAGGCCTA
TCCGGTGGTCGAGCGCATCGTCAAGGCCACCGGCCGCCCGGTCAAGGCGCTGATCGGCGATTCCTCGTTCATCCGCTCCC
TCGACCCCAAGGAGTTCACCGACGAGCGCTTCGGCGAGCCCACGGTCAAGGACATCCTGAAAGAGCTGGAAAAGCCCGGC
CGCGATCCGCGCCCCGAGTTCAAGACCGCCGCCTTCAAGGAAGGGGTCGAGACCCTGAACGACCTGAAGCCCGGCATGAT
CCTGGAGGGCGTGGTGACCAACGTCACCAATTTCGGCGCCTTCGTGGATATCGGCGTGCACCAGGATGGCCTGGTCCATA
TCTCGGTGCTGGCCGATCGCTTCGTCAAGGACCCCCACGAGGTGGTCAAGCCCGGCGATCTGGTCAAGGTCAAGGTGCTG
GAAGTGGACATCAAGCGGAGCCGCATCGCCCTGTCCATGCGCATGGACGCCCAGCCCGCCCCAGCCCGCAAGGATGATGC
GCCCCGCCGCGACGAGCGTCGCCCGGCCCCCCAGGCCCAGCAGCGTCAGCCGGCGGCCCCCAAGGCGGACGAGGGCGGCG
GAGCCTTCGCCGCCGCCTTCGCCAAGGCCAGGCAGAAGAAGTAG

Upstream 100 bases:

>100_bases
GCGTATGGCGCCTTAAGGGTTGTCGCACATCTCCGGTCGTGACAGCGGTCCGAAATTTGGCTACACCCCACCTTCTTGTC
GCAACCGAGCGTGAGCAAGC

Downstream 100 bases:

>100_bases
GGATGCGCGAAGGGACGCGGCCCTGCGCGCGTACATAGACCCCGGTCTTTTCGCCCGTCCTGCCGCAAGGGGCGGTGCGG
GACTTCAGATTTGTTGACTA

Product: TEX protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 787; Mature: 786

Protein sequence:

>787_residues
MTLSLPVATLAAITNRIALELGVKPSQVAATVQMLDEGATVPFIARYRKEATDGLDDTQLRNLEERLGYLRELEDRRAAI
LRSIEEQGKLTPDLAGQIGEADSKARLEDLYLPYKPKRRTKAQIAREAGLEPLADALLADPALVPEQAAEPYVDAEKGVA
DVKAALDGARQILMERFAEDAELLGNLRDALWDGGVLISTVAEGKSEAGAKFSDYFDYREAIKAIPSHRALALFRGRNEN
VLNLKLLTPDEAARPDGTVSQGPGEFEARIARRFSVRDLKRPADSWLAETVRWAWRIKIHLHLELELMSRLREAAEAEAI
NVFARNLRALLLQAPAGARNCIGLDPGIRTGVKVAVTDATGKVVETATIYPHQPRNDWQGSVAAIAHLARKHGIKLVAIG
NGTASRETDRLVIDVMKRHPDLGLEKLVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKAIG
VGQYQHDVDQVKLGRSLDAVVEDCVNAVGVEVNTASAPLLARVAGLSPTVARNVVEFRDRFGPFASREALKQVERLGAKA
FEQAAGFLRVVGGVNPLDSSAVHPEAYPVVERIVKATGRPVKALIGDSSFIRSLDPKEFTDERFGEPTVKDILKELEKPG
RDPRPEFKTAAFKEGVETLNDLKPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISVLADRFVKDPHEVVKPGDLVKVKVL
EVDIKRSRIALSMRMDAQPAPARKDDAPRRDERRPAPQAQQRQPAAPKADEGGGAFAAAFAKARQKK

Sequences:

>Translated_787_residues
MTLSLPVATLAAITNRIALELGVKPSQVAATVQMLDEGATVPFIARYRKEATDGLDDTQLRNLEERLGYLRELEDRRAAI
LRSIEEQGKLTPDLAGQIGEADSKARLEDLYLPYKPKRRTKAQIAREAGLEPLADALLADPALVPEQAAEPYVDAEKGVA
DVKAALDGARQILMERFAEDAELLGNLRDALWDGGVLISTVAEGKSEAGAKFSDYFDYREAIKAIPSHRALALFRGRNEN
VLNLKLLTPDEAARPDGTVSQGPGEFEARIARRFSVRDLKRPADSWLAETVRWAWRIKIHLHLELELMSRLREAAEAEAI
NVFARNLRALLLQAPAGARNCIGLDPGIRTGVKVAVTDATGKVVETATIYPHQPRNDWQGSVAAIAHLARKHGIKLVAIG
NGTASRETDRLVIDVMKRHPDLGLEKLVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKAIG
VGQYQHDVDQVKLGRSLDAVVEDCVNAVGVEVNTASAPLLARVAGLSPTVARNVVEFRDRFGPFASREALKQVERLGAKA
FEQAAGFLRVVGGVNPLDSSAVHPEAYPVVERIVKATGRPVKALIGDSSFIRSLDPKEFTDERFGEPTVKDILKELEKPG
RDPRPEFKTAAFKEGVETLNDLKPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISVLADRFVKDPHEVVKPGDLVKVKVL
EVDIKRSRIALSMRMDAQPAPARKDDAPRRDERRPAPQAQQRQPAAPKADEGGGAFAAAFAKARQKK
>Mature_786_residues
TLSLPVATLAAITNRIALELGVKPSQVAATVQMLDEGATVPFIARYRKEATDGLDDTQLRNLEERLGYLRELEDRRAAIL
RSIEEQGKLTPDLAGQIGEADSKARLEDLYLPYKPKRRTKAQIAREAGLEPLADALLADPALVPEQAAEPYVDAEKGVAD
VKAALDGARQILMERFAEDAELLGNLRDALWDGGVLISTVAEGKSEAGAKFSDYFDYREAIKAIPSHRALALFRGRNENV
LNLKLLTPDEAARPDGTVSQGPGEFEARIARRFSVRDLKRPADSWLAETVRWAWRIKIHLHLELELMSRLREAAEAEAIN
VFARNLRALLLQAPAGARNCIGLDPGIRTGVKVAVTDATGKVVETATIYPHQPRNDWQGSVAAIAHLARKHGIKLVAIGN
GTASRETDRLVIDVMKRHPDLGLEKLVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKAIGV
GQYQHDVDQVKLGRSLDAVVEDCVNAVGVEVNTASAPLLARVAGLSPTVARNVVEFRDRFGPFASREALKQVERLGAKAF
EQAAGFLRVVGGVNPLDSSAVHPEAYPVVERIVKATGRPVKALIGDSSFIRSLDPKEFTDERFGEPTVKDILKELEKPGR
DPRPEFKTAAFKEGVETLNDLKPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISVLADRFVKDPHEVVKPGDLVKVKVLE
VDIKRSRIALSMRMDAQPAPARKDDAPRRDERRPAPQAQQRQPAAPKADEGGGAFAAAFAKARQKK

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=788, Percent_Identity=35.0253807106599, Blast_Score=384, Evalue=1e-106,
Organism=Homo sapiens, GI27597090, Length=775, Percent_Identity=22.7096774193548, Blast_Score=84, Evalue=6e-16,
Organism=Escherichia coli, GI87082262, Length=757, Percent_Identity=65.3896961690885, Blast_Score=956, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=78, Percent_Identity=44.8717948717949, Blast_Score=73, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17511129, Length=725, Percent_Identity=28.6896551724138, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17552892, Length=294, Percent_Identity=29.2517006802721, Blast_Score=76, Evalue=8e-14,
Organism=Drosophila melanogaster, GI62484314, Length=765, Percent_Identity=32.0261437908497, Blast_Score=370, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 85701; Mature: 85570

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSLPVATLAAITNRIALELGVKPSQVAATVQMLDEGATVPFIARYRKEATDGLDDTQL
CCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHH
RNLEERLGYLRELEDRRAAILRSIEEQGKLTPDLAGQIGEADSKARLEDLYLPYKPKRRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCHHH
KAQIAREAGLEPLADALLADPALVPEQAAEPYVDAEKGVADVKAALDGARQILMERFAED
HHHHHHHCCCHHHHHHHHCCCCCCCHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
AELLGNLRDALWDGGVLISTVAEGKSEAGAKFSDYFDYREAIKAIPSHRALALFRGRNEN
HHHHHHHHHHHHCCCEEEEEHHCCCHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC
VLNLKLLTPDEAARPDGTVSQGPGEFEARIARRFSVRDLKRPADSWLAETVRWAWRIKIH
EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEEE
LHLELELMSRLREAAEAEAINVFARNLRALLLQAPAGARNCIGLDPGIRTGVKVAVTDAT
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCC
GKVVETATIYPHQPRNDWQGSVAAIAHLARKHGIKLVAIGNGTASRETDRLVIDVMKRHP
CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCC
DLGLEKLVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKAIG
CCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VGQYQHDVDQVKLGRSLDAVVEDCVNAVGVEVNTASAPLLARVAGLSPTVARNVVEFRDR
CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHCCCHHHHHHHHHHHHH
FGPFASREALKQVERLGAKAFEQAAGFLRVVGGVNPLDSSAVHPEAYPVVERIVKATGRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
VKALIGDSSFIRSLDPKEFTDERFGEPTVKDILKELEKPGRDPRPEFKTAAFKEGVETLN
HHHHHCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
DLKPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISVLADRFVKDPHEVVKPGDLVKVKVL
HCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHCCCHHHCCCCCEEEEEEE
EVDIKRSRIALSMRMDAQPAPARKDDAPRRDERRPAPQAQQRQPAAPKADEGGGAFAAAF
EEEHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHH
AKARQKK
HHHHCCC
>Mature Secondary Structure 
TLSLPVATLAAITNRIALELGVKPSQVAATVQMLDEGATVPFIARYRKEATDGLDDTQL
CCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHH
RNLEERLGYLRELEDRRAAILRSIEEQGKLTPDLAGQIGEADSKARLEDLYLPYKPKRRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCHHH
KAQIAREAGLEPLADALLADPALVPEQAAEPYVDAEKGVADVKAALDGARQILMERFAED
HHHHHHHCCCHHHHHHHHCCCCCCCHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
AELLGNLRDALWDGGVLISTVAEGKSEAGAKFSDYFDYREAIKAIPSHRALALFRGRNEN
HHHHHHHHHHHHCCCEEEEEHHCCCHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC
VLNLKLLTPDEAARPDGTVSQGPGEFEARIARRFSVRDLKRPADSWLAETVRWAWRIKIH
EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEEE
LHLELELMSRLREAAEAEAINVFARNLRALLLQAPAGARNCIGLDPGIRTGVKVAVTDAT
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCC
GKVVETATIYPHQPRNDWQGSVAAIAHLARKHGIKLVAIGNGTASRETDRLVIDVMKRHP
CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCC
DLGLEKLVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKAIG
CCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VGQYQHDVDQVKLGRSLDAVVEDCVNAVGVEVNTASAPLLARVAGLSPTVARNVVEFRDR
CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHCCCHHHHHHHHHHHHH
FGPFASREALKQVERLGAKAFEQAAGFLRVVGGVNPLDSSAVHPEAYPVVERIVKATGRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
VKALIGDSSFIRSLDPKEFTDERFGEPTVKDILKELEKPGRDPRPEFKTAAFKEGVETLN
HHHHHCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
DLKPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISVLADRFVKDPHEVVKPGDLVKVKVL
HCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHCCCHHHCCCCCEEEEEEE
EVDIKRSRIALSMRMDAQPAPARKDDAPRRDERRPAPQAQQRQPAAPKADEGGGAFAAAF
EEEHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHH
AKARQKK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]