| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is marR [C]
Identifier: 83312515
GI number: 83312515
Start: 3711812
End: 3712267
Strand: Reverse
Name: marR [C]
Synonym: amb3416
Alternate gene names: 83312515
Gene position: 3712267-3711812 (Counterclockwise)
Preceding gene: 83312516
Following gene: 83312514
Centisome position: 74.74
GC content: 67.11
Gene sequence:
>456_bases ATGTCGCCCGCCGTCTCGGAATTGACCGCTCACCTTGGCTACTGGCTTCGTCAGGTGTCCAACCACGTCTCCCATTCCTT TGCCCGCATGCTGGCGGCAAAGGAGGTGACCGTCGCGGAATGGGCGCTGATGCGCATGCTCTATGGCCAGGACCCCTTGT CCCCCGGCCGGCTGGCGGCGCGGATGGGGCTGACGCCGGGTGCCGTCACCAAGCTTGCTGATCGTCTGATCGCTAAGAAT TTGGTCGCCCGGCGGCCCAGCCTCGACGACCGGCGGGCGCAAACCCTGAGCCTGACCGCCAGGGGGGCGGAATTCGTTCC CCAATTGGCCGCCCTGGCCGACCGGAACGATGCCGCGTGTTTCGCTCATCTGTCCCGGGAGGAGCGCCGGGCCTTGGAGC TTATCCTGAAGGACACCGTGGCGCGGCTTGGCCTGACCGCCACGCCCGTCGACTGA
Upstream 100 bases:
>100_bases TCGCCCGTCCTGCCGCAAGGGGCGGTGCGGGACTTCAGATTTGTTGACTAGGAAGATAATAATGATGTAGTTTCCTAGTC AATTAAATCGAGAGTCGCCC
Downstream 100 bases:
>100_bases CCCCATGCAGAGGAGATGACCATGGACGCAAGCCGGATCGCCACGGCCCAGGCCTGTCTGGACGGAGCCGAAAGTGGCGC CATGACCTTCCCTCAGATCG
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; MarR Family Transcriptional Regulator; Transcriptional Regulator Marr Family
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSPAVSELTAHLGYWLRQVSNHVSHSFARMLAAKEVTVAEWALMRMLYGQDPLSPGRLAARMGLTPGAVTKLADRLIAKN LVARRPSLDDRRAQTLSLTARGAEFVPQLAALADRNDAACFAHLSREERRALELILKDTVARLGLTATPVD
Sequences:
>Translated_151_residues MSPAVSELTAHLGYWLRQVSNHVSHSFARMLAAKEVTVAEWALMRMLYGQDPLSPGRLAARMGLTPGAVTKLADRLIAKN LVARRPSLDDRRAQTLSLTARGAEFVPQLAALADRNDAACFAHLSREERRALELILKDTVARLGLTATPVD >Mature_150_residues SPAVSELTAHLGYWLRQVSNHVSHSFARMLAAKEVTVAEWALMRMLYGQDPLSPGRLAARMGLTPGAVTKLADRLIAKNL VARRPSLDDRRAQTLSLTARGAEFVPQLAALADRNDAACFAHLSREERRALELILKDTVARLGLTATPVD
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16527; Mature: 16396
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPAVSELTAHLGYWLRQVSNHVSHSFARMLAAKEVTVAEWALMRMLYGQDPLSPGRLAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH RMGLTPGAVTKLADRLIAKNLVARRPSLDDRRAQTLSLTARGAEFVPQLAALADRNDAAC HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH FAHLSREERRALELILKDTVARLGLTATPVD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SPAVSELTAHLGYWLRQVSNHVSHSFARMLAAKEVTVAEWALMRMLYGQDPLSPGRLAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH RMGLTPGAVTKLADRLIAKNLVARRPSLDDRRAQTLSLTARGAEFVPQLAALADRNDAAC HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH FAHLSREERRALELILKDTVARLGLTATPVD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA