| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312509
Identifier: 83312509
GI number: 83312509
Start: 3704877
End: 3705686
Strand: Reverse
Name: 83312509
Synonym: amb3410
Alternate gene names: NA
Gene position: 3705686-3704877 (Counterclockwise)
Preceding gene: 83312510
Following gene: 83312504
Centisome position: 74.6
GC content: 68.89
Gene sequence:
>810_bases ATGAACATCAAGGACATTCTCGTCCATCTGGACGGCGACAAGGTGGATAGCGGCACTCTGGCCCTGGCGGTGGCCCAGGC GCAGCGCTTCGGCGCGCGGCTGACCGGCCTGTTCGCGCGCAAGGAAATCAGCCCCACCGCCATGGTCGCCCGCCATCCCA GCAACACCTTGCTGGCCCAGGCCGACGCCGCCCGCCAGGCCTTCGAGGCGGCGACCGCCGGCCTCGAAACCCGCTGGTGG CAGATCGTCCACGGCGCCGAGACCGATCTGCTGGGCGAGGCGGTGTTCTGCAGCCACTACGTGGACCTGGTGATCGTCTC CCAGCCCGCCGCCTACGGCAAGAACGTGCCCGAGACCATGGTCGAGCAGATCATCCTCAATTCCGGCCGCCCCGTCCTGG TGGTGCCCGTGGAATACACCCATCGCCCCCTGGGCAAGAAGGTGGTCATCGGCTGGCGTTCGGGCAAGCAGGCGGCACGC GCCCTGCACGATTGCCTCCCCCTGGTGGAAGGCGCCGACGAGGTGCTGGTCGCCTCGGTGCGCGGCTTCGCCCCCATGGA TTCCACCACGCCCCGGGTCGACGTCATCGACCATCTGCGCGTCCACGGCCTGCCCGTCCACGGCGAGCGGGTCAATACCG AGGGCCTCGGCATCATGGACTCCCTGCTGTCGCGGGCCTACGACATCGATGCCGACCTGCTGGTCATCGGCGGCCATGTG GGCCGCACCCTGTCCTTCTCTGGCAAGGCCGGCGCCGGCACCCGCCACATCCTGGCCCACGCCTCCATCCCCGTACTGTT CAGCTGCTGA
Upstream 100 bases:
>100_bases AACCAATACCGATTTGCGCAATTTCGCTTGACGTGCGCCTCCGCCGGGGGTGAACTATCCTGACCGGAAAAGACAACGAT ACCGGACACAGGGTGGGGTC
Downstream 100 bases:
>100_bases GCGGCTGAAGGAAGGGAAAGGGCGAAGGGACTCGTCCCTTCGCGCATCCCTGTTCCTTGATGCCGCCGGATCGGGCGGAT CAGGACGACGCCCCGCCGCG
Product: universal stress protein UspA-like nucleotide-binding protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein; Universal Stress Protein UspA; Universal Stress Protein Family Protein; Universal Stress Protein Family; UspA Stress Protein; Universal Stress Family Protein; Universal Stress Protein UspA Family; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MNIKDILVHLDGDKVDSGTLALAVAQAQRFGARLTGLFARKEISPTAMVARHPSNTLLAQADAARQAFEAATAGLETRWW QIVHGAETDLLGEAVFCSHYVDLVIVSQPAAYGKNVPETMVEQIILNSGRPVLVVPVEYTHRPLGKKVVIGWRSGKQAAR ALHDCLPLVEGADEVLVASVRGFAPMDSTTPRVDVIDHLRVHGLPVHGERVNTEGLGIMDSLLSRAYDIDADLLVIGGHV GRTLSFSGKAGAGTRHILAHASIPVLFSC
Sequences:
>Translated_269_residues MNIKDILVHLDGDKVDSGTLALAVAQAQRFGARLTGLFARKEISPTAMVARHPSNTLLAQADAARQAFEAATAGLETRWW QIVHGAETDLLGEAVFCSHYVDLVIVSQPAAYGKNVPETMVEQIILNSGRPVLVVPVEYTHRPLGKKVVIGWRSGKQAAR ALHDCLPLVEGADEVLVASVRGFAPMDSTTPRVDVIDHLRVHGLPVHGERVNTEGLGIMDSLLSRAYDIDADLLVIGGHV GRTLSFSGKAGAGTRHILAHASIPVLFSC >Mature_269_residues MNIKDILVHLDGDKVDSGTLALAVAQAQRFGARLTGLFARKEISPTAMVARHPSNTLLAQADAARQAFEAATAGLETRWW QIVHGAETDLLGEAVFCSHYVDLVIVSQPAAYGKNVPETMVEQIILNSGRPVLVVPVEYTHRPLGKKVVIGWRSGKQAAR ALHDCLPLVEGADEVLVASVRGFAPMDSTTPRVDVIDHLRVHGLPVHGERVNTEGLGIMDSLLSRAYDIDADLLVIGGHV GRTLSFSGKAGAGTRHILAHASIPVLFSC
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28809; Mature: 28809
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00801 TRANSKETOLASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKDILVHLDGDKVDSGTLALAVAQAQRFGARLTGLFARKEISPTAMVARHPSNTLLAQ CCHHHEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEEH ADAARQAFEAATAGLETRWWQIVHGAETDLLGEAVFCSHYVDLVIVSQPAAYGKNVPETM HHHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHHHHHCEEEEEEECCHHHCCCCHHHH VEQIILNSGRPVLVVPVEYTHRPLGKKVVIGWRSGKQAARALHDCLPLVEGADEVLVASV HHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHH RGFAPMDSTTPRVDVIDHLRVHGLPVHGERVNTEGLGIMDSLLSRAYDIDADLLVIGGHV CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCEEEECCCC GRTLSFSGKAGAGTRHILAHASIPVLFSC CCEEEECCCCCCCCCEEEEECCCCEEEEC >Mature Secondary Structure MNIKDILVHLDGDKVDSGTLALAVAQAQRFGARLTGLFARKEISPTAMVARHPSNTLLAQ CCHHHEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEEH ADAARQAFEAATAGLETRWWQIVHGAETDLLGEAVFCSHYVDLVIVSQPAAYGKNVPETM HHHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHHHHHCEEEEEEECCHHHCCCCHHHH VEQIILNSGRPVLVVPVEYTHRPLGKKVVIGWRSGKQAARALHDCLPLVEGADEVLVASV HHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHH RGFAPMDSTTPRVDVIDHLRVHGLPVHGERVNTEGLGIMDSLLSRAYDIDADLLVIGGHV CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCEEEECCCC GRTLSFSGKAGAGTRHILAHASIPVLFSC CCEEEECCCCCCCCCEEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA