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The map label for this gene is yvdB [H]

Identifier: 83312479

GI number: 83312479

Start: 3669481

End: 3671139

Strand: Reverse

Name: yvdB [H]

Synonym: amb3380

Alternate gene names: 83312479

Gene position: 3671139-3669481 (Counterclockwise)

Preceding gene: 83312480

Following gene: 83312465

Centisome position: 73.91

GC content: 67.75

Gene sequence:

>1659_bases
GTGGTGGTCATGGCGGTGATGGTGCTGACGCCCCGCTTCACCCGCGCGGTGCCGCCGGCCATCCTGGCCCTGGCGGCGGG
CCTTGCCGCCTATTTCGGCCTTGCGGCCTTCGATCCGGCCCTGCTGGAGGTCGAGGGGAACCTGCTTCTGGTGGGGCGGA
TTTCCGCCGGAGGCTTCGGGGTGGGAGCGACCATCGGCCAGCACTGGCGCTCCCTGGGGGCGCTGGAGCCCTCGATCCTG
CTGGAGGTCATCGTCCCCGCCCTGACCCTGGCGGCGCTGCTGTCCATCGACACCTTGAAGACCTGCGTCGTCCTCGACGC
CATGACCAGTTCCAGCAGCAATCCCAACCGCGACCTGGTGGGCCAGGGCATCGGCAACGTCGCCTCGGCGCTGGTGGGCG
GCGTGCCCGGAGCCGGGACCATGGGCGCCTCGCTGATCAATGTCAGCAGCGGCGCCAATACCCGGGTGTCGGGCCTGATG
GCCGGGGCGCTGTGCTTCGTGGCCTTCCTGGTGCTGTCGCCGGTGATCGCCTGGGTGCCGGTGGCGGCCCTGGCCTCCAT
CTTGATGGTCATCGGCTTTCGCATGATCGACCGGCATTCCCTGGCCTTCTTCAACACGCCGGCCACGCGGCTGGATTTCC
TGGTGATCACGGCGGTGATCGTGGTCGCCCTGTTCGTCAACCTGATCGCCGCCTCGGGCGTGGGAGTGGCCTTCGCCATC
TTGCTGTTCATCCGCGAGCAGACCCGCAGCACCGTGGTCCGCAACCGCATCGAGGGCAACCACCTCTTCTCCAAGCGCCA
GCGTTCCGGCGAAGAGGCGGAGGGGGCGGAGGAGGGGCCGTCCGACACCGTCGTCTTCGAATTGCAGGGCAGCCTGTTCT
TCGGCACCGCCAGCCAGCTGCATGCCGCCCTGGAGCCCGAGACCCAGACCCGCAAGTTCGTCATTCTCAGCATGCGCCGG
GTGCAGTCCCTGGACCTCACCGCCACCCATGTGCTGGAGCAGATCAAGGACCGGCTGGAGGAGAACGACGCCTATCTGGT
GTTCTGCGACATCCCCAAGGGCCTGCCCAGCGGCCTGAAGATGAAGCGTTTCCTCAAGGATACCGGGGTGGTGCGTCCCA
CCAACAAGGCCTTCGCCTTCCGCCAGCTGGACGAGGCCCTGGAATGGGTGGAGGGCCAGCGCAACGCCGCCAAGGGGGCG
CCCCAGGGGGAGGATCTGGTTCTCGACATCCCCGACATGGCCATGTTCGCCGGGCTGTCCCCCAAGGCCATCAAGGACCT
GAATGCCGCCGTGACGCTTCGTCCGGTCCATGCGGGCAAGAAGGTGTTCAAGGCGGGAAGCTCGGGCGACGAGTTGTTCC
TGATCCGGCGCGGCACCGTCAAGATCACCTTGCCCATCCACAAGAAGGAGCACTATCACCTGGCCACCTGCGGCCCCGGC
GAGATCATCGGGGGAATCGGCTTCCTGGACGGCGCCAACCATGCCGCCGATGCCCTGGCCCTGACCGAGGTGGAGGTCTA
TGTGCTGGGCCGCGACGGCTTCCTGGCCCTGGGCGAGGATCACCCCGCCATGGCCTTCCGGCTGGTGGAGACCGTGGCCC
TCAATCTGGCCGGACGGCTGCGGGCCACCGTGTCGGAAATCCACGCGCTGCGGGGGTAG

Upstream 100 bases:

>100_bases
CAGCCAGATTCCCAAGTTTCTCGGCGTGCCCGGTGGGCCAAGCCTGTGGGCGGCGCTGCGCCTGCCCGCCTTGTGGGCGT
GGCAGAGCATCGTCGTCGGC

Downstream 100 bases:

>100_bases
GGTCGGGCGGCCAGTTACGTCCGATCCGCCGCCTGGCGGGCTGTTGCCCGCGCCCGCCCGGGGCGCGATGCCACGGTCCC
CCTTTGATTTTATGAATAAG

Product: Sulfate permease and related transporters

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MVVMAVMVLTPRFTRAVPPAILALAAGLAAYFGLAAFDPALLEVEGNLLLVGRISAGGFGVGATIGQHWRSLGALEPSIL
LEVIVPALTLAALLSIDTLKTCVVLDAMTSSSSNPNRDLVGQGIGNVASALVGGVPGAGTMGASLINVSSGANTRVSGLM
AGALCFVAFLVLSPVIAWVPVAALASILMVIGFRMIDRHSLAFFNTPATRLDFLVITAVIVVALFVNLIAASGVGVAFAI
LLFIREQTRSTVVRNRIEGNHLFSKRQRSGEEAEGAEEGPSDTVVFELQGSLFFGTASQLHAALEPETQTRKFVILSMRR
VQSLDLTATHVLEQIKDRLEENDAYLVFCDIPKGLPSGLKMKRFLKDTGVVRPTNKAFAFRQLDEALEWVEGQRNAAKGA
PQGEDLVLDIPDMAMFAGLSPKAIKDLNAAVTLRPVHAGKKVFKAGSSGDELFLIRRGTVKITLPIHKKEHYHLATCGPG
EIIGGIGFLDGANHAADALALTEVEVYVLGRDGFLALGEDHPAMAFRLVETVALNLAGRLRATVSEIHALRG

Sequences:

>Translated_552_residues
MVVMAVMVLTPRFTRAVPPAILALAAGLAAYFGLAAFDPALLEVEGNLLLVGRISAGGFGVGATIGQHWRSLGALEPSIL
LEVIVPALTLAALLSIDTLKTCVVLDAMTSSSSNPNRDLVGQGIGNVASALVGGVPGAGTMGASLINVSSGANTRVSGLM
AGALCFVAFLVLSPVIAWVPVAALASILMVIGFRMIDRHSLAFFNTPATRLDFLVITAVIVVALFVNLIAASGVGVAFAI
LLFIREQTRSTVVRNRIEGNHLFSKRQRSGEEAEGAEEGPSDTVVFELQGSLFFGTASQLHAALEPETQTRKFVILSMRR
VQSLDLTATHVLEQIKDRLEENDAYLVFCDIPKGLPSGLKMKRFLKDTGVVRPTNKAFAFRQLDEALEWVEGQRNAAKGA
PQGEDLVLDIPDMAMFAGLSPKAIKDLNAAVTLRPVHAGKKVFKAGSSGDELFLIRRGTVKITLPIHKKEHYHLATCGPG
EIIGGIGFLDGANHAADALALTEVEVYVLGRDGFLALGEDHPAMAFRLVETVALNLAGRLRATVSEIHALRG
>Mature_552_residues
MVVMAVMVLTPRFTRAVPPAILALAAGLAAYFGLAAFDPALLEVEGNLLLVGRISAGGFGVGATIGQHWRSLGALEPSIL
LEVIVPALTLAALLSIDTLKTCVVLDAMTSSSSNPNRDLVGQGIGNVASALVGGVPGAGTMGASLINVSSGANTRVSGLM
AGALCFVAFLVLSPVIAWVPVAALASILMVIGFRMIDRHSLAFFNTPATRLDFLVITAVIVVALFVNLIAASGVGVAFAI
LLFIREQTRSTVVRNRIEGNHLFSKRQRSGEEAEGAEEGPSDTVVFELQGSLFFGTASQLHAALEPETQTRKFVILSMRR
VQSLDLTATHVLEQIKDRLEENDAYLVFCDIPKGLPSGLKMKRFLKDTGVVRPTNKAFAFRQLDEALEWVEGQRNAAKGA
PQGEDLVLDIPDMAMFAGLSPKAIKDLNAAVTLRPVHAGKKVFKAGSSGDELFLIRRGTVKITLPIHKKEHYHLATCGPG
EIIGGIGFLDGANHAADALALTEVEVYVLGRDGFLALGEDHPAMAFRLVETVALNLAGRLRATVSEIHALRG

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Escherichia coli, GI87081859, Length=283, Percent_Identity=28.2685512367491, Blast_Score=92, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6321564, Length=290, Percent_Identity=21.7241379310345, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6325260, Length=337, Percent_Identity=20.7715133531157, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 58491; Mature: 58491

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS50042 CNMP_BINDING_3 ; PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVMAVMVLTPRFTRAVPPAILALAAGLAAYFGLAAFDPALLEVEGNLLLVGRISAGGFG
CCEEEEEHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCC
VGATIGQHWRSLGALEPSILLEVIVPALTLAALLSIDTLKTCVVLDAMTSSSSNPNRDLV
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
GQGIGNVASALVGGVPGAGTMGASLINVSSGANTRVSGLMAGALCFVAFLVLSPVIAWVP
HCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VAALASILMVIGFRMIDRHSLAFFNTPATRLDFLVITAVIVVALFVNLIAASGVGVAFAI
HHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLFIREQTRSTVVRNRIEGNHLFSKRQRSGEEAEGAEEGPSDTVVFELQGSLFFGTASQL
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCEEECCHHHH
HAALEPETQTRKFVILSMRRVQSLDLTATHVLEQIKDRLEENDAYLVFCDIPKGLPSGLK
HHHCCCCCCCHHEEEEEHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHH
MKRFLKDTGVVRPTNKAFAFRQLDEALEWVEGQRNAAKGAPQGEDLVLDIPDMAMFAGLS
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHCCCC
PKAIKDLNAAVTLRPVHAGKKVFKAGSSGDELFLIRRGTVKITLPIHKKEHYHLATCGPG
CHHHHCCCCEEEEEECHHCHHHHHCCCCCCEEEEEECCEEEEEEEEECCCCEEEEECCCC
EIIGGIGFLDGANHAADALALTEVEVYVLGRDGFLALGEDHPAMAFRLVETVALNLAGRL
HHHHCCCCCCCCCHHHHHEEEEEEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHH
RATVSEIHALRG
HHHHHHHHHHCC
>Mature Secondary Structure
MVVMAVMVLTPRFTRAVPPAILALAAGLAAYFGLAAFDPALLEVEGNLLLVGRISAGGFG
CCEEEEEHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCC
VGATIGQHWRSLGALEPSILLEVIVPALTLAALLSIDTLKTCVVLDAMTSSSSNPNRDLV
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
GQGIGNVASALVGGVPGAGTMGASLINVSSGANTRVSGLMAGALCFVAFLVLSPVIAWVP
HCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VAALASILMVIGFRMIDRHSLAFFNTPATRLDFLVITAVIVVALFVNLIAASGVGVAFAI
HHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLFIREQTRSTVVRNRIEGNHLFSKRQRSGEEAEGAEEGPSDTVVFELQGSLFFGTASQL
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCEEECCHHHH
HAALEPETQTRKFVILSMRRVQSLDLTATHVLEQIKDRLEENDAYLVFCDIPKGLPSGLK
HHHCCCCCCCHHEEEEEHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHH
MKRFLKDTGVVRPTNKAFAFRQLDEALEWVEGQRNAAKGAPQGEDLVLDIPDMAMFAGLS
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHCCCC
PKAIKDLNAAVTLRPVHAGKKVFKAGSSGDELFLIRRGTVKITLPIHKKEHYHLATCGPG
CHHHHCCCCEEEEEECHHCHHHHHCCCCCCEEEEEECCEEEEEEEEECCCCEEEEECCCC
EIIGGIGFLDGANHAADALALTEVEVYVLGRDGFLALGEDHPAMAFRLVETVALNLAGRL
HHHHCCCCCCCCCHHHHHEEEEEEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHH
RATVSEIHALRG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]