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The map label for this gene is infA [H]

Identifier: 83312438

GI number: 83312438

Start: 3630880

End: 3631266

Strand: Reverse

Name: infA [H]

Synonym: amb3339

Alternate gene names: 83312438

Gene position: 3631266-3630880 (Counterclockwise)

Preceding gene: 83312439

Following gene: 83312437

Centisome position: 73.11

GC content: 57.11

Gene sequence:

>387_bases
ATGCCTACCGCGCGGTGCGCGATGAATTGGAACGCCACATCCGCAAGCGGTTCCCGCCTTCGGGCATGGCGCGGGAATAA
TAACCCCTTCCATGCTCGAAAAGGCTTGACCAAAACCCTGCCTGCGCTCACTTATCTTCGCGCGCGCAAAACCCAGTTCG
GAGGCCAAATGGCGAAAGAGGATGTGATCGAGTTTTCTGGGACGGTGACGGAATTGCTTCCGAACGCCATGTTCCGGGTG
AAGCTCGACAATGACCATGAGATTCTTGCCCATACGTCCGGCAAGATGCGCAAGAACCGCATTCGCGTGCTGGCCGGTGA
CCGGGTGAACGTCGAAATGACGCCCTATGACCTGACCAAGGGCCGCATCACCTTCCGTTACAAGTAA

Upstream 100 bases:

>100_bases
CACAAGGCGGTGGACCTGACCCGGCACAACGCCTGCGAGGTGGAGTTCTGGCCCACCTTCGATCCCACCCTGATCGAAGG
CAGCCGCGAGGTTCGCCTCG

Downstream 100 bases:

>100_bases
TCCCATGGCCGTTCTGGTGCTGGCGTCGGCTTCGCCCAGGCGCCTCGACCTGCTTCGCCAGATCGCCATCATGCCCGGTC
TCGTCGACCCCGCCCATGTG

Product: translation initiation factor 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MPTARCAMNWNATSASGSRLRAWRGNNNPFHARKGLTKTLPALTYLRARKTQFGGQMAKEDVIEFSGTVTELLPNAMFRV
KLDNDHEILAHTSGKMRKNRIRVLAGDRVNVEMTPYDLTKGRITFRYK

Sequences:

>Translated_128_residues
MPTARCAMNWNATSASGSRLRAWRGNNNPFHARKGLTKTLPALTYLRARKTQFGGQMAKEDVIEFSGTVTELLPNAMFRV
KLDNDHEILAHTSGKMRKNRIRVLAGDRVNVEMTPYDLTKGRITFRYK
>Mature_127_residues
PTARCAMNWNATSASGSRLRAWRGNNNPFHARKGLTKTLPALTYLRARKTQFGGQMAKEDVIEFSGTVTELLPNAMFRVK
LDNDHEILAHTSGKMRKNRIRVLAGDRVNVEMTPYDLTKGRITFRYK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787110, Length=70, Percent_Identity=70, Blast_Score=106, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 14555; Mature: 14424

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTARCAMNWNATSASGSRLRAWRGNNNPFHARKGLTKTLPALTYLRARKTQFGGQMAKE
CCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH
DVIEFSGTVTELLPNAMFRVKLDNDHEILAHTSGKMRKNRIRVLAGDRVNVEMTPYDLTK
HHHHCCCCHHHHCCCCEEEEEECCCCEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCC
GRITFRYK
CEEEEEEC
>Mature Secondary Structure 
PTARCAMNWNATSASGSRLRAWRGNNNPFHARKGLTKTLPALTYLRARKTQFGGQMAKE
CCCEEEEECCCCCCCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH
DVIEFSGTVTELLPNAMFRVKLDNDHEILAHTSGKMRKNRIRVLAGDRVNVEMTPYDLTK
HHHHCCCCHHHHCCCCEEEEEECCCCEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCC
GRITFRYK
CEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA