| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312424
Identifier: 83312424
GI number: 83312424
Start: 3606231
End: 3607781
Strand: Reverse
Name: 83312424
Synonym: amb3325
Alternate gene names: NA
Gene position: 3607781-3606231 (Counterclockwise)
Preceding gene: 83312425
Following gene: 83312414
Centisome position: 72.63
GC content: 67.7
Gene sequence:
>1551_bases GTGGCAAGGGCCAAGGCCGCCGACGACCAGGCCGTGATCGCGCACCAGAAATTGCAGATCGAGAAGCTGAACCGGGCGCT TTACGGCCCCCGCGCTGAGCGCACCGCGCGGCTGATCGACCAGATGGAATTGGTGTTCGAGGAGTTGGCCGCATCGGCCA CCGAGGACGAGATCGCTGCCGAGCAGGCAGTGGCCAAGACCACCAATGTGGTGGCCTTTACCCGCCAGCGGCCGGCCCGC AAGCCTTTCCCCGACCACCTGCCGCGCGAGCGGCTCGTAGAGCCGGCACCGACCACCTGCTCATGCTGCGGCAGCGACCG GCTGCGCAAGCTGGGCGAGGACGTCACCGAGACGCTGGAGGTGATCCCCCGGCAGTGGAAGGTGATCCAGCGCGTCCGCG AGAAGTTCACCTGCCGGGACTGCGAGAAGATCAGCCAAGCCCCGGCTCCGTTCCATGTCACCCCTCGCGGCTGGGCCGGG CCTTCACTGCTGGCGATGATTCTGTTCGAGAAGTTCGGCCAGCATCAGCCGCTCAACCGCCAGGCCGAGCGCTATGCCAA GGAAGGCGTGCCGCTCAGCCTGTCCACCCTGGCCGATCAGGTCGGGGCCGGCTGCGCCGTGCTGGAGCCGCTGATCCGCC GCATCGAGGCCCATGTCTTCGCCGCCGGGCGGCTGCACGGCGACGACACCACCGTGCCGGTCCTGGCCAAGGGCAAGACC GACACCGGCCGATGTTGGGTCTATGTCCGCGACGACCGGCCCTTCGGTGGGCCTGCGCCGCCAGCGGCGATGTTCTATTA CTCGCGCGACCGGGGCGGCGAGCATCCGCAAGGACATCTGGCCAGCTATGCCGGGCTGTTCCAGGCCGACGCCTATGGCG GCTACGCCAAGGTCTACGCGCCCGACCGCAAGCCGGGTCCGATCCTGGAGGCGGCCTGCTGGGTCCATGCACGGCGTCCG TTTTTCATCATGGCCGATCTCGCCGAGAACGCGCGGCGCAAGGCACGCGGCAAGACCACGGCGCCGGTCTCGCCGCTGGC CCTGGAGGCGGTCCAACGGATCGACGCCCTGTTCGAAATCGAACGCGCTATCAATGGCCAGACGGCCGAACAGCGCCGCG CAATCCGCCTGGAGCAATCCGCTCCCCTGGTCGCTGATCTGGAAATCTGGATGCGCGAACAGCGCGCCAAACTGTCGCGC GGCAACGATCTCGCCAAGGCCATGGATTATATGCTGAAACGCTGGCCCGCCTTCACCCGCTTCCTCGACGACGGCCGCAT CTGCCTGTCGAACAATGCCGCCGAACGTGCCCTGCGTGGCATCGCCTTGGGCCGAAAGTCGTGGCTGTTCGCCGGCTCTG ATCGTGGTGGCCAGCGCGCCGCCGCCATGTACAGCATGATCGTCACCGCCAAGATGAACGACATCGATCCGCAAGCCTGG CTGGCCGACGTCCTTGCCCGCATCGCCGGGCACTCCGCGAACCGGATCGATGAACTCCTGCCGTGGAACTGGCGCTCGCT GCCGCGCGTCGCCGACAGTCAGGCCGCCTGA
Upstream 100 bases:
>100_bases TTTATGATTCCATCGGGGAATGAAGAGCCGCCGCCACCCCCCACCCGATGATGTCGCCGCGCTGAAGGCAGCGTTGCTTC GGGTCGAGGCGGAACTGGCG
Downstream 100 bases:
>100_bases GCAAAACCGTCTTCACCTGCGGTGCTCACCGGATGCTTACGATACAGGAAGCCCTTGCGCATCGGGATGTAGGTGATGTC CGAGCACCAGACCTGATTGG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MARAKAADDQAVIAHQKLQIEKLNRALYGPRAERTARLIDQMELVFEELAASATEDEIAAEQAVAKTTNVVAFTRQRPAR KPFPDHLPRERLVEPAPTTCSCCGSDRLRKLGEDVTETLEVIPRQWKVIQRVREKFTCRDCEKISQAPAPFHVTPRGWAG PSLLAMILFEKFGQHQPLNRQAERYAKEGVPLSLSTLADQVGAGCAVLEPLIRRIEAHVFAAGRLHGDDTTVPVLAKGKT DTGRCWVYVRDDRPFGGPAPPAAMFYYSRDRGGEHPQGHLASYAGLFQADAYGGYAKVYAPDRKPGPILEAACWVHARRP FFIMADLAENARRKARGKTTAPVSPLALEAVQRIDALFEIERAINGQTAEQRRAIRLEQSAPLVADLEIWMREQRAKLSR GNDLAKAMDYMLKRWPAFTRFLDDGRICLSNNAAERALRGIALGRKSWLFAGSDRGGQRAAAMYSMIVTAKMNDIDPQAW LADVLARIAGHSANRIDELLPWNWRSLPRVADSQAA
Sequences:
>Translated_516_residues MARAKAADDQAVIAHQKLQIEKLNRALYGPRAERTARLIDQMELVFEELAASATEDEIAAEQAVAKTTNVVAFTRQRPAR KPFPDHLPRERLVEPAPTTCSCCGSDRLRKLGEDVTETLEVIPRQWKVIQRVREKFTCRDCEKISQAPAPFHVTPRGWAG PSLLAMILFEKFGQHQPLNRQAERYAKEGVPLSLSTLADQVGAGCAVLEPLIRRIEAHVFAAGRLHGDDTTVPVLAKGKT DTGRCWVYVRDDRPFGGPAPPAAMFYYSRDRGGEHPQGHLASYAGLFQADAYGGYAKVYAPDRKPGPILEAACWVHARRP FFIMADLAENARRKARGKTTAPVSPLALEAVQRIDALFEIERAINGQTAEQRRAIRLEQSAPLVADLEIWMREQRAKLSR GNDLAKAMDYMLKRWPAFTRFLDDGRICLSNNAAERALRGIALGRKSWLFAGSDRGGQRAAAMYSMIVTAKMNDIDPQAW LADVLARIAGHSANRIDELLPWNWRSLPRVADSQAA >Mature_515_residues ARAKAADDQAVIAHQKLQIEKLNRALYGPRAERTARLIDQMELVFEELAASATEDEIAAEQAVAKTTNVVAFTRQRPARK PFPDHLPRERLVEPAPTTCSCCGSDRLRKLGEDVTETLEVIPRQWKVIQRVREKFTCRDCEKISQAPAPFHVTPRGWAGP SLLAMILFEKFGQHQPLNRQAERYAKEGVPLSLSTLADQVGAGCAVLEPLIRRIEAHVFAAGRLHGDDTTVPVLAKGKTD TGRCWVYVRDDRPFGGPAPPAAMFYYSRDRGGEHPQGHLASYAGLFQADAYGGYAKVYAPDRKPGPILEAACWVHARRPF FIMADLAENARRKARGKTTAPVSPLALEAVQRIDALFEIERAINGQTAEQRRAIRLEQSAPLVADLEIWMREQRAKLSRG NDLAKAMDYMLKRWPAFTRFLDDGRICLSNNAAERALRGIALGRKSWLFAGSDRGGQRAAAMYSMIVTAKMNDIDPQAWL ADVLARIAGHSANRIDELLPWNWRSLPRVADSQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 57431; Mature: 57300
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAKAADDQAVIAHQKLQIEKLNRALYGPRAERTARLIDQMELVFEELAASATEDEIAA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EQAVAKTTNVVAFTRQRPARKPFPDHLPRERLVEPAPTTCSCCGSDRLRKLGEDVTETLE HHHHHHHHHHEEEECCCCCCCCCCCCCCHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHH VIPRQWKVIQRVREKFTCRDCEKISQAPAPFHVTPRGWAGPSLLAMILFEKFGQHQPLNR HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCH QAERYAKEGVPLSLSTLADQVGAGCAVLEPLIRRIEAHVFAAGRLHGDDTTVPVLAKGKT HHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHEECEECCCCCCEEEEECCCC DTGRCWVYVRDDRPFGGPAPPAAMFYYSRDRGGEHPQGHLASYAGLFQADAYGGYAKVYA CCCEEEEEEECCCCCCCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC PDRKPGPILEAACWVHARRPFFIMADLAENARRKARGKTTAPVSPLALEAVQRIDALFEI CCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ERAINGQTAEQRRAIRLEQSAPLVADLEIWMREQRAKLSRGNDLAKAMDYMLKRWPAFTR HHHHCCCCHHHHHHEEHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FLDDGRICLSNNAAERALRGIALGRKSWLFAGSDRGGQRAAAMYSMIVTAKMNDIDPQAW HHCCCCEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHH LADVLARIAGHSANRIDELLPWNWRSLPRVADSQAA HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARAKAADDQAVIAHQKLQIEKLNRALYGPRAERTARLIDQMELVFEELAASATEDEIAA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EQAVAKTTNVVAFTRQRPARKPFPDHLPRERLVEPAPTTCSCCGSDRLRKLGEDVTETLE HHHHHHHHHHEEEECCCCCCCCCCCCCCHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHH VIPRQWKVIQRVREKFTCRDCEKISQAPAPFHVTPRGWAGPSLLAMILFEKFGQHQPLNR HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCH QAERYAKEGVPLSLSTLADQVGAGCAVLEPLIRRIEAHVFAAGRLHGDDTTVPVLAKGKT HHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHEECEECCCCCCEEEEECCCC DTGRCWVYVRDDRPFGGPAPPAAMFYYSRDRGGEHPQGHLASYAGLFQADAYGGYAKVYA CCCEEEEEEECCCCCCCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC PDRKPGPILEAACWVHARRPFFIMADLAENARRKARGKTTAPVSPLALEAVQRIDALFEI CCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ERAINGQTAEQRRAIRLEQSAPLVADLEIWMREQRAKLSRGNDLAKAMDYMLKRWPAFTR HHHHCCCCHHHHHHEEHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FLDDGRICLSNNAAERALRGIALGRKSWLFAGSDRGGQRAAAMYSMIVTAKMNDIDPQAW HHCCCCEEECCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHH LADVLARIAGHSANRIDELLPWNWRSLPRVADSQAA HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]