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The map label for this gene is ycaC [H]

Identifier: 83312405

GI number: 83312405

Start: 3587969

End: 3588637

Strand: Reverse

Name: ycaC [H]

Synonym: amb3306

Alternate gene names: 83312405

Gene position: 3588637-3587969 (Counterclockwise)

Preceding gene: 83312406

Following gene: 83312404

Centisome position: 72.25

GC content: 60.69

Gene sequence:

>669_bases
GTGTCGCCTCGCTCAGCTTGCCCGCCTGACCCCTGCCACATGTTATCCACACAAAGGAAACACATCATGACGAAACGCTT
TTCTGCTGAAAATGCCGCACTTCTGCTGATCGACCATCAGGTCGGCACCATGCAGCTGATCAAGAATATCGACCGCGATC
TTGCCGCCAAGCAGTCGATCGCCCTGGCCAAGATGGCGAAAATCCTGAACATGCCGGTGGTGATCACCTCCAGCCAGGAA
GATCACGCCCAAGGCCCCATTCTCCCCGGAATCGCCGAAATCCTGCCGGAAGCGCATGCGGCACGGGTCAAGCGTCCCGG
CGTGGTCAACGCATGGGCCTATGCCGACTTCCACAATGCGGTGCTGGCCACCGGGCGCAAGAACCTGATCATGGCGGGCG
TCACCACCGATGTTTGCCTGATCTTCCCGGCTATTGATGCCGCGCTCGAAGGTTTTGCCGTGCAGGCCGTGATGGATGCT
TCGGGCTCGCCCAGCGATCTTTCGGAAGAGTTTTCCCGCCAGCGGATGCGTGATGCGGGGGTCGTCCTGACCGCCACCAA
TACGCTTATGGCGGAAATCGCGCAGGACTGGTCCACGCCCGCCGGGCAGCAGTTGATCACCCTGTTGTTCACCGATGTCT
TCCCGGCCCTGGGTGCCGGCATCGTCTAG

Upstream 100 bases:

>100_bases
CGCATTGCGGTGGTTTCGGGGGCGCAACTCAAGCAGCCGATTTATGCCCAAGGTCCTCTCATGCTTGCCAGTCCGGAGGC
ACTCGACGAGGCGCGTCGCC

Downstream 100 bases:

>100_bases
GTCAGAAATCAATCGCAGATCACGAATACGGAGCCCCCATCATGACCAAAGATCTCTTCCAGCCCCTGCGCTTGGGCGAA
CTTACCCTGCCGAGCCGCAT

Product: nicotinamidase-like amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSPRSACPPDPCHMLSTQRKHIMTKRFSAENAALLLIDHQVGTMQLIKNIDRDLAAKQSIALAKMAKILNMPVVITSSQE
DHAQGPILPGIAEILPEAHAARVKRPGVVNAWAYADFHNAVLATGRKNLIMAGVTTDVCLIFPAIDAALEGFAVQAVMDA
SGSPSDLSEEFSRQRMRDAGVVLTATNTLMAEIAQDWSTPAGQQLITLLFTDVFPALGAGIV

Sequences:

>Translated_222_residues
MSPRSACPPDPCHMLSTQRKHIMTKRFSAENAALLLIDHQVGTMQLIKNIDRDLAAKQSIALAKMAKILNMPVVITSSQE
DHAQGPILPGIAEILPEAHAARVKRPGVVNAWAYADFHNAVLATGRKNLIMAGVTTDVCLIFPAIDAALEGFAVQAVMDA
SGSPSDLSEEFSRQRMRDAGVVLTATNTLMAEIAQDWSTPAGQQLITLLFTDVFPALGAGIV
>Mature_221_residues
SPRSACPPDPCHMLSTQRKHIMTKRFSAENAALLLIDHQVGTMQLIKNIDRDLAAKQSIALAKMAKILNMPVVITSSQED
HAQGPILPGIAEILPEAHAARVKRPGVVNAWAYADFHNAVLATGRKNLIMAGVTTDVCLIFPAIDAALEGFAVQAVMDAS
GSPSDLSEEFSRQRMRDAGVVLTATNTLMAEIAQDWSTPAGQQLITLLFTDVFPALGAGIV

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=178, Percent_Identity=39.3258426966292, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23766; Mature: 23635

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRSACPPDPCHMLSTQRKHIMTKRFSAENAALLLIDHQVGTMQLIKNIDRDLAAKQSI
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
ALAKMAKILNMPVVITSSQEDHAQGPILPGIAEILPEAHAARVKRPGVVNAWAYADFHNA
HHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCEEHHHHHHHHHH
VLATGRKNLIMAGVTTDVCLIFPAIDAALEGFAVQAVMDASGSPSDLSEEFSRQRMRDAG
HHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
VVLTATNTLMAEIAQDWSTPAGQQLITLLFTDVFPALGAGIV
EEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SPRSACPPDPCHMLSTQRKHIMTKRFSAENAALLLIDHQVGTMQLIKNIDRDLAAKQSI
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
ALAKMAKILNMPVVITSSQEDHAQGPILPGIAEILPEAHAARVKRPGVVNAWAYADFHNA
HHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCEEHHHHHHHHHH
VLATGRKNLIMAGVTTDVCLIFPAIDAALEGFAVQAVMDASGSPSDLSEEFSRQRMRDAG
HHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
VVLTATNTLMAEIAQDWSTPAGQQLITLLFTDVFPALGAGIV
EEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]