| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312378
Identifier: 83312378
GI number: 83312378
Start: 3556004
End: 3557707
Strand: Reverse
Name: 83312378
Synonym: amb3279
Alternate gene names: NA
Gene position: 3557707-3556004 (Counterclockwise)
Preceding gene: 83312383
Following gene: 83312376
Centisome position: 71.62
GC content: 53.52
Gene sequence:
>1704_bases ATGAACGCAGCCAAACCATTGACCCGCAAAGGCAACCACTCCAAGGGCCGTAAGGCAGGGGTTTCAGATCTGGCAACGGA ATCGCTCAACGAGTTCCGGTTTATAGATATCCCAGTAATTCTGCGCCGGAAACAAGGTCGATCCATTTGGACCGCCCGCG TCACCATGGCTCCCGCTCCAGGGATGTTCGCCATCAACAATGATGGCAATCGGCTGGAACGCACCACCGGCGAAAGCGAC CTTGAAAGGGCTAAAGACAAGGCCCGGCAGCTTTACGCGGCCCTGAATTATCGGGCGGAACGAGGCGAGAGCCTTCACCC CAAGAGCTTCAACGGGTTGGTGTCGGAATATCTGCGATGGCTCGATGAGCGGGTCAATCTTGGCTTCGTCAAACCATACG TCCGTGCCCGCGTCAGCACCACCTTGGAACGGTATTTCGTTCCATTCTTCGACGACAAGTTGATCGACACCATCACCGCC GCTGATCTCGTGCGATATCATGAATGGCGCGAGAGCTATGCCATCGCCTACAAAGGTAAGACGTTCATTAAATATGAACG TAATGGCAAGGAACTGGTTCGCCCCTTCACCCCGGTCACCCCAAGCCCCGCCACGATCAGGAAGGAGCGCCAACAGTTCT ACCAGTTCATGGAGTTCTCGGCGTCCAGGGGATATTTGCGTGCGGAGGCCATTCCTCGTTTTAAGCGACTTTCCGGCACT GGCAGTGTCCGCTTGGCCTTTTCTCCCGACGAAATCGAGCGCCTGCAAAAGGTATCAGCATCGCGATGTCGTAAACACCT TCACGCCATCCAGCGCCGTGCCATGGTAATTAACCACTACCGCATGATGGTGTTATACTTATCAGGCTTGCGCACCGTTG AGGCGTCGCGCCTTAGATTTCGCGATCTCATTTCTGGGGTAGATAAGGCGGGGGAAATCTCATACCTCGTCCGGCTGCGG CCCGAGCATTTGAAAAAGGCTGATGTCAGAAAACACCTGCGGACGGTGACGCCACAGTCAGGATTCAAGTCAATCGTGGA CAACCTCAAGAAGGCTTACGCCCACTTTGATAAATATGAGGTGACCGAGGACGATTTTGTGTTCCATGACAAAGATGGAA CAATGAATCGCAACACAGCGAAGCCATTTATTGAACTGCTGGATGCCGCCAAGTTTTCCAGGGGGGTGCGTTACAAAAGC CATTATGCATTGGGATCGTTTCGACACACCTTTATCACGGACAGGCTGTATGAACGCCAAGATTTGGGCTTTGTCTCGCG TTGGACAGGAACATCCATCGAGATGATCGATCGGCATTACAGCCACGTGCTGAACGAGATGGAACATCAGGAGCCTCGAC CGCCGAACACCGTTGTCGTGCTACCCCATAGCTTGGAGTATCTGCTCGGGAAGGCCGATGTCGACCCCACTGAAGAAGGG CCGACCATTTTCAATACAGCGAAGGCGATTGAGCCTGCATTTGACCTGGATCGACGCAGGAAAGAATGGGGCGGCGACGT GAGGGAGTTCTTGCGGATCATGCGGGATGTCTATGGCGATAGGTTCGTCAATCTCCCAATCGATCAAAAGCTGGGCGAAA TCCACAACTTTGTGGGGGAGCACGGCTTTAATTCTGTGGAAGCAAACGATTTTTTGGTTCTGGTGATCGAAGTTCTTGAG GTCGAGTCCAGCGCCGTTCTTTAG
Upstream 100 bases:
>100_bases AGGAAAACTGCGACTTTCATCGTTCCTGGAATTGACAGACCTATGCCATACTTTCTACCATAGCTTGGTGGCAGGTTTTG GGGACGATCCGGGGACGCTT
Downstream 100 bases:
>100_bases GGTCGTCGGTTCAAGGGCCGGGCATCAGCATTTTTGCGGTCATGAACAGCCACAGAGATGACAACCTTGAATAGCATTGG TGCCAAACCCTGTCCCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MNAAKPLTRKGNHSKGRKAGVSDLATESLNEFRFIDIPVILRRKQGRSIWTARVTMAPAPGMFAINNDGNRLERTTGESD LERAKDKARQLYAALNYRAERGESLHPKSFNGLVSEYLRWLDERVNLGFVKPYVRARVSTTLERYFVPFFDDKLIDTITA ADLVRYHEWRESYAIAYKGKTFIKYERNGKELVRPFTPVTPSPATIRKERQQFYQFMEFSASRGYLRAEAIPRFKRLSGT GSVRLAFSPDEIERLQKVSASRCRKHLHAIQRRAMVINHYRMMVLYLSGLRTVEASRLRFRDLISGVDKAGEISYLVRLR PEHLKKADVRKHLRTVTPQSGFKSIVDNLKKAYAHFDKYEVTEDDFVFHDKDGTMNRNTAKPFIELLDAAKFSRGVRYKS HYALGSFRHTFITDRLYERQDLGFVSRWTGTSIEMIDRHYSHVLNEMEHQEPRPPNTVVVLPHSLEYLLGKADVDPTEEG PTIFNTAKAIEPAFDLDRRRKEWGGDVREFLRIMRDVYGDRFVNLPIDQKLGEIHNFVGEHGFNSVEANDFLVLVIEVLE VESSAVL
Sequences:
>Translated_567_residues MNAAKPLTRKGNHSKGRKAGVSDLATESLNEFRFIDIPVILRRKQGRSIWTARVTMAPAPGMFAINNDGNRLERTTGESD LERAKDKARQLYAALNYRAERGESLHPKSFNGLVSEYLRWLDERVNLGFVKPYVRARVSTTLERYFVPFFDDKLIDTITA ADLVRYHEWRESYAIAYKGKTFIKYERNGKELVRPFTPVTPSPATIRKERQQFYQFMEFSASRGYLRAEAIPRFKRLSGT GSVRLAFSPDEIERLQKVSASRCRKHLHAIQRRAMVINHYRMMVLYLSGLRTVEASRLRFRDLISGVDKAGEISYLVRLR PEHLKKADVRKHLRTVTPQSGFKSIVDNLKKAYAHFDKYEVTEDDFVFHDKDGTMNRNTAKPFIELLDAAKFSRGVRYKS HYALGSFRHTFITDRLYERQDLGFVSRWTGTSIEMIDRHYSHVLNEMEHQEPRPPNTVVVLPHSLEYLLGKADVDPTEEG PTIFNTAKAIEPAFDLDRRRKEWGGDVREFLRIMRDVYGDRFVNLPIDQKLGEIHNFVGEHGFNSVEANDFLVLVIEVLE VESSAVL >Mature_567_residues MNAAKPLTRKGNHSKGRKAGVSDLATESLNEFRFIDIPVILRRKQGRSIWTARVTMAPAPGMFAINNDGNRLERTTGESD LERAKDKARQLYAALNYRAERGESLHPKSFNGLVSEYLRWLDERVNLGFVKPYVRARVSTTLERYFVPFFDDKLIDTITA ADLVRYHEWRESYAIAYKGKTFIKYERNGKELVRPFTPVTPSPATIRKERQQFYQFMEFSASRGYLRAEAIPRFKRLSGT GSVRLAFSPDEIERLQKVSASRCRKHLHAIQRRAMVINHYRMMVLYLSGLRTVEASRLRFRDLISGVDKAGEISYLVRLR PEHLKKADVRKHLRTVTPQSGFKSIVDNLKKAYAHFDKYEVTEDDFVFHDKDGTMNRNTAKPFIELLDAAKFSRGVRYKS HYALGSFRHTFITDRLYERQDLGFVSRWTGTSIEMIDRHYSHVLNEMEHQEPRPPNTVVVLPHSLEYLLGKADVDPTEEG PTIFNTAKAIEPAFDLDRRRKEWGGDVREFLRIMRDVYGDRFVNLPIDQKLGEIHNFVGEHGFNSVEANDFLVLVIEVLE VESSAVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65605; Mature: 65605
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAKPLTRKGNHSKGRKAGVSDLATESLNEFRFIDIPVILRRKQGRSIWTARVTMAPAP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECHHEEECCCCCEEEEEEEEECCCC GMFAINNDGNRLERTTGESDLERAKDKARQLYAALNYRAERGESLHPKSFNGLVSEYLRW CEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LDERVNLGFVKPYVRARVSTTLERYFVPFFDDKLIDTITAADLVRYHEWRESYAIAYKGK HHHHCCCCHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHEEEEECCC TFIKYERNGKELVRPFTPVTPSPATIRKERQQFYQFMEFSASRGYLRAEAIPRFKRLSGT EEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHCHHHHHCCCC GSVRLAFSPDEIERLQKVSASRCRKHLHAIQRRAMVINHYRMMVLYLSGLRTVEASRLRF CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDLISGVDKAGEISYLVRLRPEHLKKADVRKHLRTVTPQSGFKSIVDNLKKAYAHFDKYE HHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC VTEDDFVFHDKDGTMNRNTAKPFIELLDAAKFSRGVRYKSHYALGSFRHTFITDRLYERQ CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DLGFVSRWTGTSIEMIDRHYSHVLNEMEHQEPRPPNTVVVLPHSLEYLLGKADVDPTEEG CCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCCCCCCCC PTIFNTAKAIEPAFDLDRRRKEWGGDVREFLRIMRDVYGDRFVNLPIDQKLGEIHNFVGE CCEEHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH HGFNSVEANDFLVLVIEVLEVESSAVL CCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAAKPLTRKGNHSKGRKAGVSDLATESLNEFRFIDIPVILRRKQGRSIWTARVTMAPAP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECHHEEECCCCCEEEEEEEEECCCC GMFAINNDGNRLERTTGESDLERAKDKARQLYAALNYRAERGESLHPKSFNGLVSEYLRW CEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LDERVNLGFVKPYVRARVSTTLERYFVPFFDDKLIDTITAADLVRYHEWRESYAIAYKGK HHHHCCCCHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHEEEEECCC TFIKYERNGKELVRPFTPVTPSPATIRKERQQFYQFMEFSASRGYLRAEAIPRFKRLSGT EEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHCHHHHHCCCC GSVRLAFSPDEIERLQKVSASRCRKHLHAIQRRAMVINHYRMMVLYLSGLRTVEASRLRF CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDLISGVDKAGEISYLVRLRPEHLKKADVRKHLRTVTPQSGFKSIVDNLKKAYAHFDKYE HHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC VTEDDFVFHDKDGTMNRNTAKPFIELLDAAKFSRGVRYKSHYALGSFRHTFITDRLYERQ CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DLGFVSRWTGTSIEMIDRHYSHVLNEMEHQEPRPPNTVVVLPHSLEYLLGKADVDPTEEG CCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCCCCCCCC PTIFNTAKAIEPAFDLDRRRKEWGGDVREFLRIMRDVYGDRFVNLPIDQKLGEIHNFVGE CCEEHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH HGFNSVEANDFLVLVIEVLEVESSAVL CCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA