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The map label for this gene is ydhJ [C]

Identifier: 83312373

GI number: 83312373

Start: 3541633

End: 3542385

Strand: Reverse

Name: ydhJ [C]

Synonym: amb3274

Alternate gene names: 83312373

Gene position: 3542385-3541633 (Counterclockwise)

Preceding gene: 83312374

Following gene: 83312372

Centisome position: 71.32

GC content: 63.21

Gene sequence:

>753_bases
ATGCGCAACGTCATCGCCACGTATATTTTCTCGATCCGTCTGGGGTGGACGGTCCCGGTTCTGTGCCTGCTGTCCTTCGG
AGCACAAGCTCAGGAACCGGTGATCCCGGTCCAACTGGTGGCGGTGCAGTTCACGACCCTATCTGCCGAATTGCCGGGCA
AAATCGACCGCATCACGGTGAAGGAAGGTGACCGCTTCAAGGAGGGCCAGACCCTGGTGGGTTTCGACTGCGTCATTCAA
AGGGCGCAGTTGGACGAGGCCCAGGCGGTGCTTGGCGCGGCGGAAAAGTCCAAATCGGTGCATAAGCGCCTGCTGGAGCT
TAACTCGGCCGGAACGCTGGAGGCCGAGAAGTCGGCGTCCGACGCCGCCGTGGCCCAGGCCAAGCTCAACTCGGCCCGTG
CCGTCACCAGCAAATGCGGCATTGCCGCCCCGTTCTCCGGCCGGGTGGTCGAGCAGAAGGCGAGAGCCCATCAATATGTC
CAGGCCGGGCAACCGATCCTCGACATCCTCGACGATTCGACCCTGGAGGCCGAGTTCATCGTGCCGTCCGGCTGGGTTCG
CAACCTCAAACCCGGTCTGGTGGTCCAGGTGGCGGTGGACGAGGTCAAGAAGGTCTACCCCGCCAAGATCGCTCGCGTCG
GCGCCAAGGTCGATGCGGTCAGCCATTCGGTCAAGGTGGTGGCCGAGGTCAAGGGCGACTATCCCGAACTGATCGCCGGT
ATGACAGGCCGGGTCCAAATGCCAGCGCCATGA

Upstream 100 bases:

>100_bases
GAACTGGCGATCTTCATCATACTGGCAAGCTGGCCTTCACCCAGCAACTCAAGCAGGCCGGTCGCCATGCGGCCATGGCC
CGTCTGGCGCGGTGGGGATG

Downstream 100 bases:

>100_bases
GCGACAACCCGCTCATCAACCTGCTGGGGCTGGAGGAGCACGCGAGGAAGGCGGCCAATTCCACCGAACTTGGCTTTGTC
ATGGTCAATGACAGCCGGGC

Product: membrane-fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRNVIATYIFSIRLGWTVPVLCLLSFGAQAQEPVIPVQLVAVQFTTLSAELPGKIDRITVKEGDRFKEGQTLVGFDCVIQ
RAQLDEAQAVLGAAEKSKSVHKRLLELNSAGTLEAEKSASDAAVAQAKLNSARAVTSKCGIAAPFSGRVVEQKARAHQYV
QAGQPILDILDDSTLEAEFIVPSGWVRNLKPGLVVQVAVDEVKKVYPAKIARVGAKVDAVSHSVKVVAEVKGDYPELIAG
MTGRVQMPAP

Sequences:

>Translated_250_residues
MRNVIATYIFSIRLGWTVPVLCLLSFGAQAQEPVIPVQLVAVQFTTLSAELPGKIDRITVKEGDRFKEGQTLVGFDCVIQ
RAQLDEAQAVLGAAEKSKSVHKRLLELNSAGTLEAEKSASDAAVAQAKLNSARAVTSKCGIAAPFSGRVVEQKARAHQYV
QAGQPILDILDDSTLEAEFIVPSGWVRNLKPGLVVQVAVDEVKKVYPAKIARVGAKVDAVSHSVKVVAEVKGDYPELIAG
MTGRVQMPAP
>Mature_250_residues
MRNVIATYIFSIRLGWTVPVLCLLSFGAQAQEPVIPVQLVAVQFTTLSAELPGKIDRITVKEGDRFKEGQTLVGFDCVIQ
RAQLDEAQAVLGAAEKSKSVHKRLLELNSAGTLEAEKSASDAAVAQAKLNSARAVTSKCGIAAPFSGRVVEQKARAHQYV
QAGQPILDILDDSTLEAEFIVPSGWVRNLKPGLVVQVAVDEVKKVYPAKIARVGAKVDAVSHSVKVVAEVKGDYPELIAG
MTGRVQMPAP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 26739; Mature: 26739

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNVIATYIFSIRLGWTVPVLCLLSFGAQAQEPVIPVQLVAVQFTTLSAELPGKIDRITV
CCHHHEEHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEE
KEGDRFKEGQTLVGFDCVIQRAQLDEAQAVLGAAEKSKSVHKRLLELNSAGTLEAEKSAS
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DAAVAQAKLNSARAVTSKCGIAAPFSGRVVEQKARAHQYVQAGQPILDILDDSTLEAEFI
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEE
VPSGWVRNLKPGLVVQVAVDEVKKVYPAKIARVGAKVDAVSHSVKVVAEVKGDYPELIAG
CCCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEECCCCCHHHHHC
MTGRVQMPAP
CCCCEECCCC
>Mature Secondary Structure
MRNVIATYIFSIRLGWTVPVLCLLSFGAQAQEPVIPVQLVAVQFTTLSAELPGKIDRITV
CCHHHEEHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEE
KEGDRFKEGQTLVGFDCVIQRAQLDEAQAVLGAAEKSKSVHKRLLELNSAGTLEAEKSAS
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DAAVAQAKLNSARAVTSKCGIAAPFSGRVVEQKARAHQYVQAGQPILDILDDSTLEAEFI
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEE
VPSGWVRNLKPGLVVQVAVDEVKKVYPAKIARVGAKVDAVSHSVKVVAEVKGDYPELIAG
CCCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEECCCCCHHHHHC
MTGRVQMPAP
CCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]