| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312371
Identifier: 83312371
GI number: 83312371
Start: 3538218
End: 3540323
Strand: Reverse
Name: 83312371
Synonym: amb3272
Alternate gene names: NA
Gene position: 3540323-3538218 (Counterclockwise)
Preceding gene: 83312372
Following gene: 83312370
Centisome position: 71.27
GC content: 64.1
Gene sequence:
>2106_bases ATGGACGCAGCCGCCCTGCCATTGCCGGGTTTGCGCGATGAGCTATCGCTGCATCCGGGGCCGGCCAGCCTCGACGGCTC GCCCACCTGGACCATCCGCGATCCGGTGCGAAACCGCTATTTCCGCATCGGCTGGGCCGCCTTCGAGGCGCTGAGCCGCT GGGGTGGCACCGCCGGTGACGTCGCTAAGGCGGTGCGTTCTGAAACCACCATCGACATGAGTGATGAGGAGGTGGTGGAT GTCGCCAAGTTCCTCCACGGCAACCAACTGACCCTGGCCAACAGCCATGCCGACACACTGCGGCTGGCCGAGCAGGCGGC GACGGAAAAGCATTCCGTCTTCAACTGGCTGCTGCACCATTACCTGTTCTTCCGCATTCCGCTGGTGCGGCCCGACCGGT TTCTGGGGGCCATGCTGCCGCTGATGTGCTGGCTGGGCAGCCAGTGGTTTCGTTGGACCAGTGCCGGGGCTTTGTTGCTC GGGTTGATGCTGGTGGTGCGGCAATGGGAGGTCTTCACCGCCACCCTGGTCGATACCCTCTCGCTTTCCGGCATGGTCAG CTACGGCATCGCCTTGTCATTTGTGAAGGTGATCCACGAACTGGCCCACGGCCTCACCGCCAAGCGCTACGGCTGTCGGG TTCCCACCATGGGAATCGCCTTCCTGGTGATGTGGCCGGTGCTCTACACCGACGTCAACGAGACCTGGACCTTGGCGTCG CGGCGTCAGCGCCTGCTGGTCGGCTCCGCTGGCATCCTGGCCGAACTCTCGGTGGCGGCCTGGGCCACGCTGCTCTGGGC ATTCCTGCCCGACGGTGGCATGCGACAAGCGGTGTTTGTGCTGGCCGCCTTCACCTGGGTGTCGTCGCTGGCCATCAATC TCAGCCCATTCATGCGATTCGATGGCTATTTCCTTGCCATGGACGCCCTGGAATTGCCCAACCTGCATCCGCGTTCCTTC GCCATGGCCAAGTGGTGGCTACGGGAAGTGTTGTTCGATCTGGGCGAGCCACCGCCGGAAGCCATGAACCCAGGCCGCCA GCGGGCCATGGTCGTCTTTGCTTTTGCCGTTTGGATTTACCGGCTGGTGTTGTTCCTCGGCATTGCCGCCCTGGTCTATC ACTTCTTCATCAAGGCGGTGGGCGTTCTCCTGTTTGCCGTCGAGATCGGCTGGTTCGTGTTCCTGCCCATCTGGAACGAG GTCAAGGAATGGGCCAAGCGCCGCGACGGTATTTTCAAGAACTCCCGCTGGAAGCGACCATTGCTGGGAATCGGCCTCGC CTTGGTGGTCGCGGTCATCCCGTGGCGGACCCGGATTGAGGCTCCGGCCTCGGTCGCCGCCGAGATTATGGCGCCGCTAT TCCTGCCCGCTCCGGCCCGGTTGGAAGCGGTGCTGGTCGAGCGCGGCCAGCATGTGGCGGCGGGAACAAAGTTGCTGGCC TTCACCGCCCCCGATATCGATTCAAGGCGTGCCATCACCGCCGCCAAGCTGGCGGGAAAATCAGCCGAGTTGGAGGCGGT CAAGCTCGATCCCTTCGGGCGGGAACGCCTGTCGGCCCTGACCGAGGAACTATCGCGGCTTGGGTCTGAGAAGGCGGCCC TGGATGCCGAGGCCGAACGTCTGACCATTACCTCGCCCCATGCCGGGATCTTCCTTGATCCACTGCCGGATCTGAAGCCC GGCGCTTGGCTGTCGCCCAAGCAGCAATTGGGTCTGATCCGTGTTGATGGTTCGACCATCGCCACCGCCTATGTGGCCGA GGATGACCTGGAGAGGATCAAGCCGGGCGACACCGCCCGTTTCATCCCCAACGGCCTCGACCATGTCGGTATGACCGGCA CGGTGCTGGCCATCGACCGTAATCCGATCAAGGTGCTGACCGATCCGGCCCTGGCCTCGCTCCATGGCGGCGACATCCCC GTGCGGGTATCGGGCCAGATTCTGGTGCCCCAGGGAAGCTTCTTCCGCGTTACCATCCGTCTGGATGGCACGGCCCCCAA CCTCAAGCTGATCGGCCATGTCCAGATCAGCGGCCAGGGCCAAAGCCTGATTGGCCGCGCCGCCCGCTCGGCCCTGGTGG TGCTGGTCCGGGAGTGGGGCGCATAA
Upstream 100 bases:
>100_bases TGAAAGGCACCGCCCGACTCGACGGCCATCGGGTGGCGTTGATCTACTGGCTGGCGCGGCGCCCGCTGGCGGTCGTGCGT AACTTTGTGGGTCTGTAGCC
Downstream 100 bases:
>100_bases TCATCAACCCAGTGAAGGAGATCGACATGAAGATCAAGCAAACCCTGATGGTGATGATGGTGGCGGCCATGCTGACCCCT GCACCAATAGCCCTGGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: M50 Family Peptidase; Peptidase; Membrane-Fusion Protein; Peptidase Family M; HlyD Domain-Containing Protein; Transmembrane Protein; Membrane-Fusion Domain; Zinc Metallopeptidase; Secretion Protein HlyD Family Protein; Membrane Zinc Metallopeptidase; Membrane-Fusion Protein Contains Peptidase Family; Zinc Metallopeptidase Family Protein; Integral Membrane Protein; Zn-Dependent Protease
Number of amino acids: Translated: 701; Mature: 701
Protein sequence:
>701_residues MDAAALPLPGLRDELSLHPGPASLDGSPTWTIRDPVRNRYFRIGWAAFEALSRWGGTAGDVAKAVRSETTIDMSDEEVVD VAKFLHGNQLTLANSHADTLRLAEQAATEKHSVFNWLLHHYLFFRIPLVRPDRFLGAMLPLMCWLGSQWFRWTSAGALLL GLMLVVRQWEVFTATLVDTLSLSGMVSYGIALSFVKVIHELAHGLTAKRYGCRVPTMGIAFLVMWPVLYTDVNETWTLAS RRQRLLVGSAGILAELSVAAWATLLWAFLPDGGMRQAVFVLAAFTWVSSLAINLSPFMRFDGYFLAMDALELPNLHPRSF AMAKWWLREVLFDLGEPPPEAMNPGRQRAMVVFAFAVWIYRLVLFLGIAALVYHFFIKAVGVLLFAVEIGWFVFLPIWNE VKEWAKRRDGIFKNSRWKRPLLGIGLALVVAVIPWRTRIEAPASVAAEIMAPLFLPAPARLEAVLVERGQHVAAGTKLLA FTAPDIDSRRAITAAKLAGKSAELEAVKLDPFGRERLSALTEELSRLGSEKAALDAEAERLTITSPHAGIFLDPLPDLKP GAWLSPKQQLGLIRVDGSTIATAYVAEDDLERIKPGDTARFIPNGLDHVGMTGTVLAIDRNPIKVLTDPALASLHGGDIP VRVSGQILVPQGSFFRVTIRLDGTAPNLKLIGHVQISGQGQSLIGRAARSALVVLVREWGA
Sequences:
>Translated_701_residues MDAAALPLPGLRDELSLHPGPASLDGSPTWTIRDPVRNRYFRIGWAAFEALSRWGGTAGDVAKAVRSETTIDMSDEEVVD VAKFLHGNQLTLANSHADTLRLAEQAATEKHSVFNWLLHHYLFFRIPLVRPDRFLGAMLPLMCWLGSQWFRWTSAGALLL GLMLVVRQWEVFTATLVDTLSLSGMVSYGIALSFVKVIHELAHGLTAKRYGCRVPTMGIAFLVMWPVLYTDVNETWTLAS RRQRLLVGSAGILAELSVAAWATLLWAFLPDGGMRQAVFVLAAFTWVSSLAINLSPFMRFDGYFLAMDALELPNLHPRSF AMAKWWLREVLFDLGEPPPEAMNPGRQRAMVVFAFAVWIYRLVLFLGIAALVYHFFIKAVGVLLFAVEIGWFVFLPIWNE VKEWAKRRDGIFKNSRWKRPLLGIGLALVVAVIPWRTRIEAPASVAAEIMAPLFLPAPARLEAVLVERGQHVAAGTKLLA FTAPDIDSRRAITAAKLAGKSAELEAVKLDPFGRERLSALTEELSRLGSEKAALDAEAERLTITSPHAGIFLDPLPDLKP GAWLSPKQQLGLIRVDGSTIATAYVAEDDLERIKPGDTARFIPNGLDHVGMTGTVLAIDRNPIKVLTDPALASLHGGDIP VRVSGQILVPQGSFFRVTIRLDGTAPNLKLIGHVQISGQGQSLIGRAARSALVVLVREWGA >Mature_701_residues MDAAALPLPGLRDELSLHPGPASLDGSPTWTIRDPVRNRYFRIGWAAFEALSRWGGTAGDVAKAVRSETTIDMSDEEVVD VAKFLHGNQLTLANSHADTLRLAEQAATEKHSVFNWLLHHYLFFRIPLVRPDRFLGAMLPLMCWLGSQWFRWTSAGALLL GLMLVVRQWEVFTATLVDTLSLSGMVSYGIALSFVKVIHELAHGLTAKRYGCRVPTMGIAFLVMWPVLYTDVNETWTLAS RRQRLLVGSAGILAELSVAAWATLLWAFLPDGGMRQAVFVLAAFTWVSSLAINLSPFMRFDGYFLAMDALELPNLHPRSF AMAKWWLREVLFDLGEPPPEAMNPGRQRAMVVFAFAVWIYRLVLFLGIAALVYHFFIKAVGVLLFAVEIGWFVFLPIWNE VKEWAKRRDGIFKNSRWKRPLLGIGLALVVAVIPWRTRIEAPASVAAEIMAPLFLPAPARLEAVLVERGQHVAAGTKLLA FTAPDIDSRRAITAAKLAGKSAELEAVKLDPFGRERLSALTEELSRLGSEKAALDAEAERLTITSPHAGIFLDPLPDLKP GAWLSPKQQLGLIRVDGSTIATAYVAEDDLERIKPGDTARFIPNGLDHVGMTGTVLAIDRNPIKVLTDPALASLHGGDIP VRVSGQILVPQGSFFRVTIRLDGTAPNLKLIGHVQISGQGQSLIGRAARSALVVLVREWGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77105; Mature: 77105
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAAALPLPGLRDELSLHPGPASLDGSPTWTIRDPVRNRYFRIGWAAFEALSRWGGTAGD CCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEECCHHHCCEEEEHHHHHHHHHHCCCCHHH VAKAVRSETTIDMSDEEVVDVAKFLHGNQLTLANSHADTLRLAEQAATEKHSVFNWLLHH HHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH YLFFRIPLVRPDRFLGAMLPLMCWLGSQWFRWTSAGALLLGLMLVVRQWEVFTATLVDTL HHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLSGMVSYGIALSFVKVIHELAHGLTAKRYGCRVPTMGIAFLVMWPVLYTDVNETWTLAS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH RRQRLLVGSAGILAELSVAAWATLLWAFLPDGGMRQAVFVLAAFTWVSSLAINLSPFMRF HHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHC DGYFLAMDALELPNLHPRSFAMAKWWLREVLFDLGEPPPEAMNPGRQRAMVVFAFAVWIY CCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHH RLVLFLGIAALVYHFFIKAVGVLLFAVEIGWFVFLPIWNEVKEWAKRRDGIFKNSRWKRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCCCCCCC LLGIGLALVVAVIPWRTRIEAPASVAAEIMAPLFLPAPARLEAVLVERGQHVAAGTKLLA HHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCEEEE FTAPDIDSRRAITAAKLAGKSAELEAVKLDPFGRERLSALTEELSRLGSEKAALDAEAER EECCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCCCE LTITSPHAGIFLDPLPDLKPGAWLSPKQQLGLIRVDGSTIATAYVAEDDLERIKPGDTAR EEEECCCCCEEECCCCCCCCCCCCCCHHHCCEEEECCCEEEEEEECHHHHHHCCCCCCCC FIPNGLDHVGMTGTVLAIDRNPIKVLTDPALASLHGGDIPVRVSGQILVPQGSFFRVTIR CCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHCCCCCCEEEECCEEEECCCCEEEEEEE LDGTAPNLKLIGHVQISGQGQSLIGRAARSALVVLVREWGA ECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHEECCCC >Mature Secondary Structure MDAAALPLPGLRDELSLHPGPASLDGSPTWTIRDPVRNRYFRIGWAAFEALSRWGGTAGD CCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEECCHHHCCEEEEHHHHHHHHHHCCCCHHH VAKAVRSETTIDMSDEEVVDVAKFLHGNQLTLANSHADTLRLAEQAATEKHSVFNWLLHH HHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH YLFFRIPLVRPDRFLGAMLPLMCWLGSQWFRWTSAGALLLGLMLVVRQWEVFTATLVDTL HHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLSGMVSYGIALSFVKVIHELAHGLTAKRYGCRVPTMGIAFLVMWPVLYTDVNETWTLAS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH RRQRLLVGSAGILAELSVAAWATLLWAFLPDGGMRQAVFVLAAFTWVSSLAINLSPFMRF HHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHC DGYFLAMDALELPNLHPRSFAMAKWWLREVLFDLGEPPPEAMNPGRQRAMVVFAFAVWIY CCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHH RLVLFLGIAALVYHFFIKAVGVLLFAVEIGWFVFLPIWNEVKEWAKRRDGIFKNSRWKRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCCCCCCC LLGIGLALVVAVIPWRTRIEAPASVAAEIMAPLFLPAPARLEAVLVERGQHVAAGTKLLA HHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCEEEE FTAPDIDSRRAITAAKLAGKSAELEAVKLDPFGRERLSALTEELSRLGSEKAALDAEAER EECCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCCCE LTITSPHAGIFLDPLPDLKPGAWLSPKQQLGLIRVDGSTIATAYVAEDDLERIKPGDTAR EEEECCCCCEEECCCCCCCCCCCCCCHHHCCEEEECCCEEEEEEECHHHHHHCCCCCCCC FIPNGLDHVGMTGTVLAIDRNPIKVLTDPALASLHGGDIPVRVSGQILVPQGSFFRVTIR CCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHCCCCCCEEEECCEEEECCCCEEEEEEE LDGTAPNLKLIGHVQISGQGQSLIGRAARSALVVLVREWGA ECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA