Click here to switch to the map view.

The map label for this gene is tolR [H]

Identifier: 83312312

GI number: 83312312

Start: 3480888

End: 3481349

Strand: Reverse

Name: tolR [H]

Synonym: amb3213

Alternate gene names: 83312312

Gene position: 3481349-3480888 (Counterclockwise)

Preceding gene: 83312313

Following gene: 83312311

Centisome position: 70.09

GC content: 66.88

Gene sequence:

>462_bases
ATGGGCGCCTCGCTGGGGAACCGCAAGGGGCACTCCCGCAAGTTCCGGCCGGTGGCCGAGATCAACGTCACCCCCATGGT
CGACGTCATGCTGGTGCTGCTGGTGATCTTCATGGTCACCGCTCCCTTGCTGACCGCCGGCGTGCAGGTGGACCTGCCCA
AGACCTCGTCGGCGCCTCTGAAGGGCGACGACCAGCCGCTGTCGGTGACCATCGACGCCCATGGCAAGATCTGGATTCAG
GAAACCGAGGTCCAGATCGATGAACTGGCTCCCCGGCTGCAGGCCATCACCGCCCAGAAGCCCGAGACCCGCATCTTCGT
GCGCGGCGACAAGGGCATCGATTACGGCCGGGTGATGGAGGTGATGGGTACGCTCGGCGCCGCCGGCTTCGCCAAGGTCG
CCCTGGTCACCGAGGTCAAGGGCTCCGAGCCGGCCAAGCCGGTCAAGAAGGGGGGGCGCTAG

Upstream 100 bases:

>100_bases
ACAAGATCTCCACCGACCTGGACCGCTATTCCAAGCGTCTGGAGAACTTCGCCGGTGAATTCGGCGCCATCCTGTCGCGC
CAGCTCGAGGAGAAGGCCTG

Downstream 100 bases:

>100_bases
GCTCGGATCATGGAATTGCGGCGCGAAAGCTACGTCTTCTCCGGCCTGTTGCATCTGGCGCTGTTCCTGCTGGCGGTGTT
CGGCCTGCCGCAGTTCTGGC

Product: biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MGASLGNRKGHSRKFRPVAEINVTPMVDVMLVLLVIFMVTAPLLTAGVQVDLPKTSSAPLKGDDQPLSVTIDAHGKIWIQ
ETEVQIDELAPRLQAITAQKPETRIFVRGDKGIDYGRVMEVMGTLGAAGFAKVALVTEVKGSEPAKPVKKGGR

Sequences:

>Translated_153_residues
MGASLGNRKGHSRKFRPVAEINVTPMVDVMLVLLVIFMVTAPLLTAGVQVDLPKTSSAPLKGDDQPLSVTIDAHGKIWIQ
ETEVQIDELAPRLQAITAQKPETRIFVRGDKGIDYGRVMEVMGTLGAAGFAKVALVTEVKGSEPAKPVKKGGR
>Mature_152_residues
GASLGNRKGHSRKFRPVAEINVTPMVDVMLVLLVIFMVTAPLLTAGVQVDLPKTSSAPLKGDDQPLSVTIDAHGKIWIQE
TEVQIDELAPRLQAITAQKPETRIFVRGDKGIDYGRVMEVMGTLGAAGFAKVALVTEVKGSEPAKPVKKGGR

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=127, Percent_Identity=44.0944881889764, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16385; Mature: 16254

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGASLGNRKGHSRKFRPVAEINVTPMVDVMLVLLVIFMVTAPLLTAGVQVDLPKTSSAPL
CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC
KGDDQPLSVTIDAHGKIWIQETEVQIDELAPRLQAITAQKPETRIFVRGDKGIDYGRVME
CCCCCCEEEEEECCCEEEEEECCEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
VMGTLGAAGFAKVALVTEVKGSEPAKPVKKGGR
HHHHHCCCCHHHEEEEEECCCCCCCCHHHCCCC
>Mature Secondary Structure 
GASLGNRKGHSRKFRPVAEINVTPMVDVMLVLLVIFMVTAPLLTAGVQVDLPKTSSAPL
CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC
KGDDQPLSVTIDAHGKIWIQETEVQIDELAPRLQAITAQKPETRIFVRGDKGIDYGRVME
CCCCCCEEEEEECCCEEEEEECCEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
VMGTLGAAGFAKVALVTEVKGSEPAKPVKKGGR
HHHHHCCCCHHHEEEEEECCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]