| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is secE
Identifier: 83312246
GI number: 83312246
Start: 3397019
End: 3397216
Strand: Reverse
Name: secE
Synonym: amb3147
Alternate gene names: NA
Gene position: 3397216-3397019 (Counterclockwise)
Preceding gene: 83312247
Following gene: 83312245
Centisome position: 68.39
GC content: 59.6
Gene sequence:
>198_bases ATGGCAAAAACGTCTCCGGCCCTTTTCTTCAAGCAGGTCCGCCAGGAAGTCGCCAAGGTGACTTGGCCGACAAGGCGCGA AACGACCGTCTCCACCGGCATGGTGGTGGTGATGGTGGTGATCGCCGCTGTCTTCTTCCTGGTCGTCGACCAGATTTTCG CCGCGAGCGTAAAGCTCCTGTTCGGTCTGGGAGGCTGA
Upstream 100 bases:
>100_bases GGCTGCAGGAGTGTAGCTCAACTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAGCCCCTCCACTCCTGC CAACTTTCGACTGTAGAGAT
Downstream 100 bases:
>100_bases GGACGAGATGACTACCGCCCGCTGGTACGTGATTCACGTCTATTCCGGCTTCGAGAAGAAGGTCGCCCAGTCCATCCGCG AACAGGCGGAACAGAAGGGC
Product: preprotein translocase subunit SecE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MAKTSPALFFKQVRQEVAKVTWPTRRETTVSTGMVVVMVVIAAVFFLVVDQIFAASVKLLFGLGG
Sequences:
>Translated_65_residues MAKTSPALFFKQVRQEVAKVTWPTRRETTVSTGMVVVMVVIAAVFFLVVDQIFAASVKLLFGLGG >Mature_64_residues AKTSPALFFKQVRQEVAKVTWPTRRETTVSTGMVVVMVVIAAVFFLVVDQIFAASVKLLFGLGG
Specific function: Unknown
COG id: COG0690
COG function: function code U; Preprotein translocase subunit SecE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7089; Mature: 6957
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: PS01067 SECE_SEC61G
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTSPALFFKQVRQEVAKVTWPTRRETTVSTGMVVVMVVIAAVFFLVVDQIFAASVKLL CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLGG HHCCC >Mature Secondary Structure AKTSPALFFKQVRQEVAKVTWPTRRETTVSTGMVVVMVVIAAVFFLVVDQIFAASVKLL CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLGG HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA