| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312188
Identifier: 83312188
GI number: 83312188
Start: 3338125
End: 3338676
Strand: Reverse
Name: 83312188
Synonym: amb3089
Alternate gene names: NA
Gene position: 3338676-3338125 (Counterclockwise)
Preceding gene: 83312189
Following gene: 83312185
Centisome position: 67.22
GC content: 68.3
Gene sequence:
>552_bases GTGTGTCGTCCGGAGTTTTCGCTCATGAAGTTCACTGCCATTGCCGCCGCCCTGCTGCTGGGTCTCGCCGCCGCCGGCGA GGCCGCCGCCGCCGATATCGAGGTGGTCAACCCGTTCATGCGCGCCGCGCCCATGGCCGGCGGGACCGGGGTCGCCTTCA TGACCATCAACAATCACGGCGGCGCCGACCGTCTGGTGGCGGCGGAATCCGATATTTCCAAGGCGGTCGAGTTGCACACT CACGTCAAGGACGGGGACATCTACCGCATGCGCAAGGTGGAATCCCTGGCCGTGGCCGAGCATGGCACCGTCGAGCTGAA GCCGGGCGGCGATCACGTGATGTTCATCGGCCTCAACGCCGCCGTGAAGGAAGGCCGCACCGTGCCGGTCACCCTGGTCT TCGAGAAGGCGGGCAAGGTTGCCGTGCAGGTGCCGGTCCTGGCCCCCGGGGCCATGACCCCCGGCGCCATGGCCCCGGGT GGAATGGCTCCCGGCGGAATGGCCCCGGGTGGCGGCATGCCGGGCGGTATGATGCACCACGGCCACAAATAG
Upstream 100 bases:
>100_bases CGCGGGCCTCCGATCCAGGCGGCCTGACGTCGCCTTTCCCGCGTTATCCCGATATTGTGTCTTCAGCCAGCCTCCCCCAA CCAGTGGGGTGGGGTCGTTC
Downstream 100 bases:
>100_bases GGCCAAGCGGGGCGGCAGCCCGCCGGGCCAGCCTTACGGCGCCGTTCCCAGCCTGACCGGGGGCGGCGCCATGTCGGGGG TGAGGCGGCTTCCCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MCRPEFSLMKFTAIAAALLLGLAAAGEAAAADIEVVNPFMRAAPMAGGTGVAFMTINNHGGADRLVAAESDISKAVELHT HVKDGDIYRMRKVESLAVAEHGTVELKPGGDHVMFIGLNAAVKEGRTVPVTLVFEKAGKVAVQVPVLAPGAMTPGAMAPG GMAPGGMAPGGGMPGGMMHHGHK
Sequences:
>Translated_183_residues MCRPEFSLMKFTAIAAALLLGLAAAGEAAAADIEVVNPFMRAAPMAGGTGVAFMTINNHGGADRLVAAESDISKAVELHT HVKDGDIYRMRKVESLAVAEHGTVELKPGGDHVMFIGLNAAVKEGRTVPVTLVFEKAGKVAVQVPVLAPGAMTPGAMAPG GMAPGGMAPGGGMPGGMMHHGHK >Mature_183_residues MCRPEFSLMKFTAIAAALLLGLAAAGEAAAADIEVVNPFMRAAPMAGGTGVAFMTINNHGGADRLVAAESDISKAVELHT HVKDGDIYRMRKVESLAVAEHGTVELKPGGDHVMFIGLNAAVKEGRTVPVTLVFEKAGKVAVQVPVLAPGAMTPGAMAPG GMAPGGMAPGGGMPGGMMHHGHK
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18589; Mature: 18589
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 7.7 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRPEFSLMKFTAIAAALLLGLAAAGEAAAADIEVVNPFMRAAPMAGGTGVAFMTINNHG CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHHCHHHHHCCCCCCCCEEEEEEECCC GADRLVAAESDISKAVELHTHVKDGDIYRMRKVESLAVAEHGTVELKPGGDHVMFIGLNA CCCEEEECHHHHHHHHHHHEECCCCCEEEHHHHHHHEEECCCEEEECCCCCEEEEEECCH AVKEGRTVPVTLVFEKAGKVAVQVPVLAPGAMTPGAMAPGGMAPGGMAPGGGMPGGMMHH HHHCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GHK CCC >Mature Secondary Structure MCRPEFSLMKFTAIAAALLLGLAAAGEAAAADIEVVNPFMRAAPMAGGTGVAFMTINNHG CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHHCHHHHHCCCCCCCCEEEEEEECCC GADRLVAAESDISKAVELHTHVKDGDIYRMRKVESLAVAEHGTVELKPGGDHVMFIGLNA CCCEEEECHHHHHHHHHHHEECCCCCEEEHHHHHHHEEECCCEEEECCCCCEEEEEECCH AVKEGRTVPVTLVFEKAGKVAVQVPVLAPGAMTPGAMAPGGMAPGGMAPGGGMPGGMMHH HHHCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GHK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA