| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83312181
Identifier: 83312181
GI number: 83312181
Start: 3331918
End: 3332586
Strand: Reverse
Name: 83312181
Synonym: amb3082
Alternate gene names: NA
Gene position: 3332586-3331918 (Counterclockwise)
Preceding gene: 83312182
Following gene: 83312180
Centisome position: 67.09
GC content: 60.84
Gene sequence:
>669_bases ATGGCCAATAACAGCAAGAGCAAGCCGGCGCTCGTGCGAATCCTTACCGTGATCGCCATGATTTTCATCGGCGGTGCGTA TTTCTCACCCATCTGGTGGGTGGCGCTGAAGGCTCCCAACTATCCGGCCGAGACCTTCCCTGACGGTATCCGCATCCATT TCCACGTCAACGGCGTGTTCAACGGCTGCGCCAGCCAGGAAAAGCCCAAGGACGGCAAGGAAGCCGCCTGGGGCGACGAG GAAGGCGGCCTGGATTGCGTCCACGAGATGAACGTGATCAACCACTTCATCGGCATGGAGCCCATCGAGGTCGGCGCCAA ATACGAGATCAAGGCCGCTCCTTACCTGTTCTCCCTGGTGGCGGTGATGTTGGTGGCCTTCCTGTTCTATGCCGGGCCGT TCTGGTGGGTTCTGCCCTTCTCGGGCATCGTCATTCCGGTGGCCTTCGTCGTCGACTATTCCGCCTGGCTGTGGTGGTTC GGGCATAATCTGCGCGCCTGGGCGGCCTTTTCGGTCAAGCCGTTCATGCCGACGGTGTTCGGCGACGGCAAGGTGGCGCA GTTCTCTACCTACTCCTACCCTCACTACGGCTTCGGCCTGCTGATGGCGGCGTCCCTTTGCCTGGTGCTGGCGACGCTGT TGCAGCGCAAGGCGCTGAAGTCCAAATAG
Upstream 100 bases:
>100_bases GATTTTTCTGATATAAGGTGGATACTGGGCGGTGTCCGGGCTTTCCGGCCGCCGCCCTTCCTCCCTCTGATCCACCTGAC CAGCCAACGGGGTAACGTCC
Downstream 100 bases:
>100_bases CCTCTCACGCGCTGGAGAGCGGAGACGAAGGACCATGGGTGTGCTCATCAAGACCTTTTCCAAGTCTAGACTGGGAGCCA TGGCCTTCGTCTTCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MANNSKSKPALVRILTVIAMIFIGGAYFSPIWWVALKAPNYPAETFPDGIRIHFHVNGVFNGCASQEKPKDGKEAAWGDE EGGLDCVHEMNVINHFIGMEPIEVGAKYEIKAAPYLFSLVAVMLVAFLFYAGPFWWVLPFSGIVIPVAFVVDYSAWLWWF GHNLRAWAAFSVKPFMPTVFGDGKVAQFSTYSYPHYGFGLLMAASLCLVLATLLQRKALKSK
Sequences:
>Translated_222_residues MANNSKSKPALVRILTVIAMIFIGGAYFSPIWWVALKAPNYPAETFPDGIRIHFHVNGVFNGCASQEKPKDGKEAAWGDE EGGLDCVHEMNVINHFIGMEPIEVGAKYEIKAAPYLFSLVAVMLVAFLFYAGPFWWVLPFSGIVIPVAFVVDYSAWLWWF GHNLRAWAAFSVKPFMPTVFGDGKVAQFSTYSYPHYGFGLLMAASLCLVLATLLQRKALKSK >Mature_221_residues ANNSKSKPALVRILTVIAMIFIGGAYFSPIWWVALKAPNYPAETFPDGIRIHFHVNGVFNGCASQEKPKDGKEAAWGDEE GGLDCVHEMNVINHFIGMEPIEVGAKYEIKAAPYLFSLVAVMLVAFLFYAGPFWWVLPFSGIVIPVAFVVDYSAWLWWFG HNLRAWAAFSVKPFMPTVFGDGKVAQFSTYSYPHYGFGLLMAASLCLVLATLLQRKALKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24692; Mature: 24561
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNSKSKPALVRILTVIAMIFIGGAYFSPIWWVALKAPNYPAETFPDGIRIHFHVNGVF CCCCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEEEECCCCCCCCCCCCEEEEEEECCCC NGCASQEKPKDGKEAAWGDEEGGLDCVHEMNVINHFIGMEPIEVGAKYEIKAAPYLFSLV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCEEEECCCHHHHHHH AVMLVAFLFYAGPFWWVLPFSGIVIPVAFVVDYSAWLWWFGHNLRAWAAFSVKPFMPTVF HHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEE GDGKVAQFSTYSYPHYGFGLLMAASLCLVLATLLQRKALKSK CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANNSKSKPALVRILTVIAMIFIGGAYFSPIWWVALKAPNYPAETFPDGIRIHFHVNGVF CCCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEEEECCCCCCCCCCCCEEEEEEECCCC NGCASQEKPKDGKEAAWGDEEGGLDCVHEMNVINHFIGMEPIEVGAKYEIKAAPYLFSLV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCEEEECCCHHHHHHH AVMLVAFLFYAGPFWWVLPFSGIVIPVAFVVDYSAWLWWFGHNLRAWAAFSVKPFMPTVF HHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEE GDGKVAQFSTYSYPHYGFGLLMAASLCLVLATLLQRKALKSK CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA