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The map label for this gene is nosD [H]

Identifier: 83312180

GI number: 83312180

Start: 3330438

End: 3331883

Strand: Reverse

Name: nosD [H]

Synonym: amb3081

Alternate gene names: 83312180

Gene position: 3331883-3330438 (Counterclockwise)

Preceding gene: 83312181

Following gene: 83312179

Centisome position: 67.08

GC content: 63.0

Gene sequence:

>1446_bases
ATGGGTGTGCTCATCAAGACCTTTTCCAAGTCTAGACTGGGAGCCATGGCCTTCGTCTTCGCCGCCAGCCTGTCCACGGC
GGGGGCGACGCCCGAGGGGCAGGACAACGAGCCGCTGCTGGATTCCTCGCTGATTCAGGCGCTGATCGACATCGCCCAGC
CGGGCCAGGTGATTTCTCCGCCGCCGGGCCGCTACAAATCCCATCTGGTGGTCAGCAAGCCCATCATCTTCGACGGCAAG
AACCAGGTGACCCTGGACGGCGAGGGGCGGGGCTCGGTGCTGTGGATCAAGACCGACGGCGCCACGGTGCGCAACTTCCG
TATCACCAATACCGGCCCCGACCATTCCAAGCAGGATGCGGGTGTGCAGGTGCGCGGCAAGGACAACGTGGTCGAAGACC
TCCGCATGGACAACGTGCTGTTCGGCTTCAGCCTGGAGCAGTCCGAGCGCAACACCGTCCGGCGCAACCGGGTCGAGGGC
AAGAAGGTCAGCCTGGGACGGCGCGGCGACGGCATCAAGCTATGGTACTCGCATCACAACGTGATCGAGGACAACCAGTT
CATCCAGGGGCGCGACATCGTCTTCTGGTACTCGACCCACAACCGCTTCGCCGGCAACCGGCAGAGCGGCGGGCGCTATG
GCCTGCATCTGATGCAGGCCCAGTACAACATCGCCGAGGGCAATTACTTCTTCGACAATTCCACCGGCATTTCCATGATG
TACGACACCGGCGACGAACTGCGGAACAACGTCATCGCCAAGGCGGTTGGGGCCCAGGGGGTGTGCATCTCGCTGAAGGA
AAGCAGCGACGTGGTGATCGAGAACAACGACATTCTCTATTGCTCGCAAGGCATTTCCATCGATGTGGCACCCTACGAGC
CCGACAGCAAGAATCATCTGCGCGGCAACCGCATCGCCTATAACGACATCGGTGTGGCCTTCCTCAACGACTGGAAGGAC
AACGAGTTCACCGGCAATCTGTTTTCCGGCAACATCACCGAAGTGGCGGTCTATGGCGGCGGCAGCGCCAAGCGCAATGT
CTGGGACGGCAACCGCTGGGAAGATTACCAGGGCTTCGACCGCGACGGCGACGGGGTGGGCGACAAGCCCCACCGGCTGT
TCAATTACGCCGGACGGGTGTGGATGGACAAGCCCAACACCCGCTTTTTCAAGGGCACGCCGCTGCTGGAGGTGCTGGAC
TTCCTCGATCGTCTGGCGCCGTTCTCCGAGCCAGTGCTGATGCTGGAGGACAAGCATCCCCTGGTGGCCTCCGACGCCCG
GGTGAAGGCTGGCTCCAGTCTTGATGCCACGGAAGATCTCAACCGCAATATCGACCGCCCCCGGCGGGCGGGCGAAGTCC
CCGTCGCCCACGAAAAGGCGGGCGCCGGCCGCGGCGGCTCGCTCGAGCCCCGGCGCGGCACTTTTGGGAGCAAGGATGAT
GACTGA

Upstream 100 bases:

>100_bases
ATGGCGGCGTCCCTTTGCCTGGTGCTGGCGACGCTGTTGCAGCGCAAGGCGCTGAAGTCCAAATAGCCTCTCACGCGCTG
GAGAGCGGAGACGAAGGACC

Downstream 100 bases:

>100_bases
GCACGATGCGCCGCCCAAGGTGGCGCCGACTCCCCACCCCAACAACAAGACGCGGCGCATGGTGATGCGTTCCATCGCCA
TGGGCGGCGCCGTGGTCGGC

Product: nitrous oxidase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MGVLIKTFSKSRLGAMAFVFAASLSTAGATPEGQDNEPLLDSSLIQALIDIAQPGQVISPPPGRYKSHLVVSKPIIFDGK
NQVTLDGEGRGSVLWIKTDGATVRNFRITNTGPDHSKQDAGVQVRGKDNVVEDLRMDNVLFGFSLEQSERNTVRRNRVEG
KKVSLGRRGDGIKLWYSHHNVIEDNQFIQGRDIVFWYSTHNRFAGNRQSGGRYGLHLMQAQYNIAEGNYFFDNSTGISMM
YDTGDELRNNVIAKAVGAQGVCISLKESSDVVIENNDILYCSQGISIDVAPYEPDSKNHLRGNRIAYNDIGVAFLNDWKD
NEFTGNLFSGNITEVAVYGGGSAKRNVWDGNRWEDYQGFDRDGDGVGDKPHRLFNYAGRVWMDKPNTRFFKGTPLLEVLD
FLDRLAPFSEPVLMLEDKHPLVASDARVKAGSSLDATEDLNRNIDRPRRAGEVPVAHEKAGAGRGGSLEPRRGTFGSKDD
D

Sequences:

>Translated_481_residues
MGVLIKTFSKSRLGAMAFVFAASLSTAGATPEGQDNEPLLDSSLIQALIDIAQPGQVISPPPGRYKSHLVVSKPIIFDGK
NQVTLDGEGRGSVLWIKTDGATVRNFRITNTGPDHSKQDAGVQVRGKDNVVEDLRMDNVLFGFSLEQSERNTVRRNRVEG
KKVSLGRRGDGIKLWYSHHNVIEDNQFIQGRDIVFWYSTHNRFAGNRQSGGRYGLHLMQAQYNIAEGNYFFDNSTGISMM
YDTGDELRNNVIAKAVGAQGVCISLKESSDVVIENNDILYCSQGISIDVAPYEPDSKNHLRGNRIAYNDIGVAFLNDWKD
NEFTGNLFSGNITEVAVYGGGSAKRNVWDGNRWEDYQGFDRDGDGVGDKPHRLFNYAGRVWMDKPNTRFFKGTPLLEVLD
FLDRLAPFSEPVLMLEDKHPLVASDARVKAGSSLDATEDLNRNIDRPRRAGEVPVAHEKAGAGRGGSLEPRRGTFGSKDD
D
>Mature_480_residues
GVLIKTFSKSRLGAMAFVFAASLSTAGATPEGQDNEPLLDSSLIQALIDIAQPGQVISPPPGRYKSHLVVSKPIIFDGKN
QVTLDGEGRGSVLWIKTDGATVRNFRITNTGPDHSKQDAGVQVRGKDNVVEDLRMDNVLFGFSLEQSERNTVRRNRVEGK
KVSLGRRGDGIKLWYSHHNVIEDNQFIQGRDIVFWYSTHNRFAGNRQSGGRYGLHLMQAQYNIAEGNYFFDNSTGISMMY
DTGDELRNNVIAKAVGAQGVCISLKESSDVVIENNDILYCSQGISIDVAPYEPDSKNHLRGNRIAYNDIGVAFLNDWKDN
EFTGNLFSGNITEVAVYGGGSAKRNVWDGNRWEDYQGFDRDGDGVGDKPHRLFNYAGRVWMDKPNTRFFKGTPLLEVLDF
LDRLAPFSEPVLMLEDKHPLVASDARVKAGSSLDATEDLNRNIDRPRRAGEVPVAHEKAGAGRGGSLEPRRGTFGSKDDD

Specific function: Involved in copper processing and transport; in the assembly of the copper chromophores of nitrous oxide reductase [H]

COG id: COG3420

COG function: function code P; Nitrous oxidase accessory protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR007742
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF05048 NosD [H]

EC number: NA

Molecular weight: Translated: 53180; Mature: 53049

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVLIKTFSKSRLGAMAFVFAASLSTAGATPEGQDNEPLLDSSLIQALIDIAQPGQVISP
CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PPGRYKSHLVVSKPIIFDGKNQVTLDGEGRGSVLWIKTDGATVRNFRITNTGPDHSKQDA
CCCCCCCEEEEECCEEECCCCEEEECCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCC
GVQVRGKDNVVEDLRMDNVLFGFSLEQSERNTVRRNRVEGKKVSLGRRGDGIKLWYSHHN
CEEEECCCCHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCCEEECCCCCCCEEEEEECCC
VIEDNQFIQGRDIVFWYSTHNRFAGNRQSGGRYGLHLMQAQYNIAEGNYFFDNSTGISMM
EECCCCEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEECCCCEEEE
YDTGDELRNNVIAKAVGAQGVCISLKESSDVVIENNDILYCSQGISIDVAPYEPDSKNHL
ECCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCEEEECCCCEEEECCCCCCCCCCC
RGNRIAYNDIGVAFLNDWKDNEFTGNLFSGNITEVAVYGGGSAKRNVWDGNRWEDYQGFD
CCCEEEEECCCEEEEECCCCCCEECCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
RDGDGVGDKPHRLFNYAGRVWMDKPNTRFFKGTPLLEVLDFLDRLAPFSEPVLMLEDKHP
CCCCCCCCCCHHHHHCCCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCC
LVASDARVKAGSSLDATEDLNRNIDRPRRAGEVPVAHEKAGAGRGGSLEPRRGTFGSKDD
EEECCCEECCCCCCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
D
C
>Mature Secondary Structure 
GVLIKTFSKSRLGAMAFVFAASLSTAGATPEGQDNEPLLDSSLIQALIDIAQPGQVISP
CEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PPGRYKSHLVVSKPIIFDGKNQVTLDGEGRGSVLWIKTDGATVRNFRITNTGPDHSKQDA
CCCCCCCEEEEECCEEECCCCEEEECCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCC
GVQVRGKDNVVEDLRMDNVLFGFSLEQSERNTVRRNRVEGKKVSLGRRGDGIKLWYSHHN
CEEEECCCCHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCCEEECCCCCCCEEEEEECCC
VIEDNQFIQGRDIVFWYSTHNRFAGNRQSGGRYGLHLMQAQYNIAEGNYFFDNSTGISMM
EECCCCEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEECCCCEEEE
YDTGDELRNNVIAKAVGAQGVCISLKESSDVVIENNDILYCSQGISIDVAPYEPDSKNHL
ECCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCEEEECCCCEEEECCCCCCCCCCC
RGNRIAYNDIGVAFLNDWKDNEFTGNLFSGNITEVAVYGGGSAKRNVWDGNRWEDYQGFD
CCCEEEEECCCEEEEECCCCCCEECCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
RDGDGVGDKPHRLFNYAGRVWMDKPNTRFFKGTPLLEVLDFLDRLAPFSEPVLMLEDKHP
CCCCCCCCCCHHHHHCCCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCC
LVASDARVKAGSSLDATEDLNRNIDRPRRAGEVPVAHEKAGAGRGGSLEPRRGTFGSKDD
EEECCCEECCCCCCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]