| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is glgP [H]
Identifier: 83312161
GI number: 83312161
Start: 3306717
End: 3309173
Strand: Reverse
Name: glgP [H]
Synonym: amb3062
Alternate gene names: 83312161
Gene position: 3309173-3306717 (Counterclockwise)
Preceding gene: 83312162
Following gene: 83312159
Centisome position: 66.62
GC content: 63.57
Gene sequence:
>2457_bases ATGAAGAATGCAAAGCCTCCGGTCGTGAGATTGCTGGGCGACGATCTGGCCAGCATCAAGGAGGCTATCGGCAGCCACCT GCTCTATACGGTGGGCAAGGAACCGATCAACGCCACAGCGCGCGACTGGTTCATGGCCGCCGCCCATACGGTGCGCGACC GGGTCACCGAGCATTGGATGCCGACCCTGAACCGCTATTACCGCGAGGATTCCAAGCGGGTCTATTACCTGTCCATGGAG TTCCTGATCGGTCGCACCCTGGTTAACAGCCTGATCAATCTCGGGCTTTACGACACCGTGCGCCAGGCCATCACCGATCT GGGCCAGGATTTTGACGAAGTGGCCGCCTGGGAGGTGGAAGCCGCCCTGGGCAATGGCGGCCTGGGGCGCCTGGCCGCCT GCCTGCTGGATTCCATGGCCACCATCGGTGTGCCGGGCTTCGGCTACGGCATCCGCTACGATTACGGCATGTTCACCCAG CACGTGGACAACGGCTGGCAGGTGGAAAGCCCGGAAAACTGGCTGCGCTATGGCAATCCCTGGGAATTCCCCCGGCCGGG CGTGATCTTCCCCGTCCGCTTCGGCGGGCGCGTCATCCATTTCCGCGATGTTCTGGGCCACACCCGCTCGCAATGGGTGG ATGCCGAGGAAGTGATGGCCATGGCCTTCGATGTGCCGGTCCCCGGCTATGGCGGCAAGGTGGTCAACAATCTGCGCCTG TGGTCGGCCAAGTCGACCCGCGAGTTCGACCTGAAATACTTCAACGCCGGCAATTACATCGAGGCCGTGCGCGACAAGAA CGAATCCGAGACCCTGTCCAAGGTGCTCTATCCCTCGGACATGACCGACCGGGGCAAGGAACTGCGCTTCAAGCAGGAAT ATTTCTTCGTCGCCGCCTCCATCCAGGACATCCTGGCCCGCTTCCGAAAAAGCCATTCCGACTGGGCTCTGCTGCCCGAC AAGGTGGCCATCCAGCTCAACGACACCCACCCCGCCTTGGTGGTGGCCGAGTTGATGCGGGTGCTGGTCGACGAGCACCA GATCGAGTGGAACAAGGCCTGGGATCTGGTGCGGGGCTGCTGCGCCTACACCAACCATACCCTGTTGCCGGAGGCGCTGG AGACCTGGTCCATCGACCTGTTCGAACGGGTGCTGCCCCGCCACCTGGAAATCGTCTTCGCCCTCAATCACGAATTCCTG CAAAGCGTCCGCTATCGCCATCCCGGCGATTCCGAACTGCTGCGCCGGGTGTCGCTGATCGCCGAGGGGCATGAGCGCCG GGTGCGCATGGGCCATCTGGCGGTGATCGGCAGCCACAAGGTCAACGGCGTCGCCGCCATCCATACCGGCTTGATGAAGA GCACCATCTTCTCGGATTTCGAGCACCTGAGCCCGGGCAAGATCACCAACAAGACCAACGGCGTGACCCCCCGGCGCTGG CTGCTGGCCGCCAATCCCACCCTGTCCGCCCTGATCACGTCGAAGATCGGCGACGGCTGGATCACCGATCTCGACAAGCT GCACAAGCTCGAGCCGCTGGCCGACGATCCCGCCTTCCGCAAGGCCTTCGCCGCCGTGAAGCGGGCCAACAAGGAACGCC TTGCCGCCATGCTGTCCCAGCGCCTGGGCGTCGAGGTGGAAGTGGAGTCCCTGTTCGACGTCCAGGTGAAGCGCATTCAC GAATACAAGCGCCAGCTCCTGAACGTGTTGCACGTCATCACCCGCTATGGCCGCATCCGCTCCAACCCGCTGCTCAATCC GGTGCCGCGCACGGTGATCATCGGCGGCAAGGCGGCGCCCGGCTACCACATCGCCAAGCTGATCATCAAGCTGGTCAACG ACGTGGCCGAGGTGATCAACAACGATCCGCTGGTCGGGGCCAAGCTGAAGCTGATCTTCGTGCCCAATTACAACGTCTCC ACCGCCGAGCTGGTGATGCCGGCCGCCGATCTGTCCGAGCAGATCTCTACCGCCGGAACCGAGGCGTCGGGCACCGGCAA CATGAAGATGAGCATGAACGGGGCGCTGACCATCGGCACCTGGGACGGCGCCAACGTGGAAATCTGCGAAGAGGTTGGCG AGGAAAACATGTTCCTGTTCGGCCTCTCGGCGCAGGATGTGGCGCGGCGCCGGGTCGACGGCTATGACGCCGTGGCGGCG GTGAAGGCCGATCCCGACCTGACCTGGGCGTTGGAAATGATCGGCAGCGGCTTCTTCTCGCCCGACCAGCCCGACCGCTT CCGTCCGTTGGTGGATATCCTGACAACGGGTGGCGACCACTATCTGCTGTCGGCCGACTTCCCGCTCTACATGGCCGCCC AGGAACGGGTGGACCAGACCTATCGCGATCCCGAGGAATGGACCCGTAAGGCCATCCTCAACGTGGCGCGCATGGGCAAG TTCTCGTCCGACCGCACGGTGGCCGAGTACGCCCGGGAGATCTGGGGGGCGCTGTAG
Upstream 100 bases:
>100_bases AAATTCATATGGATCGGGTGCCCCCTGGGCGTGACCGCCCTTGCCCGCGCTGCTGTTTCATGGCGGAATGTCCACGGATG GAACAGGCGGGAAGACAGGT
Downstream 100 bases:
>100_bases CCGTCGCTTGGGGCTTTGGCGCCAGGCTGCGGAGCAACGTCACTGCGGGGGCTTTTGCCCCCGGCCCCCCAATCGGGAAG CGCGGCTTCCCGAACCCTTC
Product: glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 818; Mature: 818
Protein sequence:
>818_residues MKNAKPPVVRLLGDDLASIKEAIGSHLLYTVGKEPINATARDWFMAAAHTVRDRVTEHWMPTLNRYYREDSKRVYYLSME FLIGRTLVNSLINLGLYDTVRQAITDLGQDFDEVAAWEVEAALGNGGLGRLAACLLDSMATIGVPGFGYGIRYDYGMFTQ HVDNGWQVESPENWLRYGNPWEFPRPGVIFPVRFGGRVIHFRDVLGHTRSQWVDAEEVMAMAFDVPVPGYGGKVVNNLRL WSAKSTREFDLKYFNAGNYIEAVRDKNESETLSKVLYPSDMTDRGKELRFKQEYFFVAASIQDILARFRKSHSDWALLPD KVAIQLNDTHPALVVAELMRVLVDEHQIEWNKAWDLVRGCCAYTNHTLLPEALETWSIDLFERVLPRHLEIVFALNHEFL QSVRYRHPGDSELLRRVSLIAEGHERRVRMGHLAVIGSHKVNGVAAIHTGLMKSTIFSDFEHLSPGKITNKTNGVTPRRW LLAANPTLSALITSKIGDGWITDLDKLHKLEPLADDPAFRKAFAAVKRANKERLAAMLSQRLGVEVEVESLFDVQVKRIH EYKRQLLNVLHVITRYGRIRSNPLLNPVPRTVIIGGKAAPGYHIAKLIIKLVNDVAEVINNDPLVGAKLKLIFVPNYNVS TAELVMPAADLSEQISTAGTEASGTGNMKMSMNGALTIGTWDGANVEICEEVGEENMFLFGLSAQDVARRRVDGYDAVAA VKADPDLTWALEMIGSGFFSPDQPDRFRPLVDILTTGGDHYLLSADFPLYMAAQERVDQTYRDPEEWTRKAILNVARMGK FSSDRTVAEYAREIWGAL
Sequences:
>Translated_818_residues MKNAKPPVVRLLGDDLASIKEAIGSHLLYTVGKEPINATARDWFMAAAHTVRDRVTEHWMPTLNRYYREDSKRVYYLSME FLIGRTLVNSLINLGLYDTVRQAITDLGQDFDEVAAWEVEAALGNGGLGRLAACLLDSMATIGVPGFGYGIRYDYGMFTQ HVDNGWQVESPENWLRYGNPWEFPRPGVIFPVRFGGRVIHFRDVLGHTRSQWVDAEEVMAMAFDVPVPGYGGKVVNNLRL WSAKSTREFDLKYFNAGNYIEAVRDKNESETLSKVLYPSDMTDRGKELRFKQEYFFVAASIQDILARFRKSHSDWALLPD KVAIQLNDTHPALVVAELMRVLVDEHQIEWNKAWDLVRGCCAYTNHTLLPEALETWSIDLFERVLPRHLEIVFALNHEFL QSVRYRHPGDSELLRRVSLIAEGHERRVRMGHLAVIGSHKVNGVAAIHTGLMKSTIFSDFEHLSPGKITNKTNGVTPRRW LLAANPTLSALITSKIGDGWITDLDKLHKLEPLADDPAFRKAFAAVKRANKERLAAMLSQRLGVEVEVESLFDVQVKRIH EYKRQLLNVLHVITRYGRIRSNPLLNPVPRTVIIGGKAAPGYHIAKLIIKLVNDVAEVINNDPLVGAKLKLIFVPNYNVS TAELVMPAADLSEQISTAGTEASGTGNMKMSMNGALTIGTWDGANVEICEEVGEENMFLFGLSAQDVARRRVDGYDAVAA VKADPDLTWALEMIGSGFFSPDQPDRFRPLVDILTTGGDHYLLSADFPLYMAAQERVDQTYRDPEEWTRKAILNVARMGK FSSDRTVAEYAREIWGAL >Mature_818_residues MKNAKPPVVRLLGDDLASIKEAIGSHLLYTVGKEPINATARDWFMAAAHTVRDRVTEHWMPTLNRYYREDSKRVYYLSME FLIGRTLVNSLINLGLYDTVRQAITDLGQDFDEVAAWEVEAALGNGGLGRLAACLLDSMATIGVPGFGYGIRYDYGMFTQ HVDNGWQVESPENWLRYGNPWEFPRPGVIFPVRFGGRVIHFRDVLGHTRSQWVDAEEVMAMAFDVPVPGYGGKVVNNLRL WSAKSTREFDLKYFNAGNYIEAVRDKNESETLSKVLYPSDMTDRGKELRFKQEYFFVAASIQDILARFRKSHSDWALLPD KVAIQLNDTHPALVVAELMRVLVDEHQIEWNKAWDLVRGCCAYTNHTLLPEALETWSIDLFERVLPRHLEIVFALNHEFL QSVRYRHPGDSELLRRVSLIAEGHERRVRMGHLAVIGSHKVNGVAAIHTGLMKSTIFSDFEHLSPGKITNKTNGVTPRRW LLAANPTLSALITSKIGDGWITDLDKLHKLEPLADDPAFRKAFAAVKRANKERLAAMLSQRLGVEVEVESLFDVQVKRIH EYKRQLLNVLHVITRYGRIRSNPLLNPVPRTVIIGGKAAPGYHIAKLIIKLVNDVAEVINNDPLVGAKLKLIFVPNYNVS TAELVMPAADLSEQISTAGTEASGTGNMKMSMNGALTIGTWDGANVEICEEVGEENMFLFGLSAQDVARRRVDGYDAVAA VKADPDLTWALEMIGSGFFSPDQPDRFRPLVDILTTGGDHYLLSADFPLYMAAQERVDQTYRDPEEWTRKAILNVARMGK FSSDRTVAEYAREIWGAL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=810, Percent_Identity=55.0617283950617, Blast_Score=892, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=811, Percent_Identity=53.7607891491985, Blast_Score=876, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=811, Percent_Identity=52.7743526510481, Blast_Score=865, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=811, Percent_Identity=50.308261405672, Blast_Score=806, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=665, Percent_Identity=54.7368421052632, Blast_Score=750, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=800, Percent_Identity=52.25, Blast_Score=861, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=782, Percent_Identity=45.7800511508951, Blast_Score=696, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=814, Percent_Identity=51.4742014742015, Blast_Score=878, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=814, Percent_Identity=51.4742014742015, Blast_Score=877, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=829, Percent_Identity=47.8890229191797, Blast_Score=732, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=810, Percent_Identity=52.962962962963, Blast_Score=884, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=810, Percent_Identity=52.962962962963, Blast_Score=884, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 91978; Mature: 91978
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNAKPPVVRLLGDDLASIKEAIGSHLLYTVGKEPINATARDWFMAAAHTVRDRVTEHWM CCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH PTLNRYYREDSKRVYYLSMEFLIGRTLVNSLINLGLYDTVRQAITDLGQDFDEVAAWEVE HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH AALGNGGLGRLAACLLDSMATIGVPGFGYGIRYDYGMFTQHVDNGWQVESPENWLRYGNP HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHCCCCCEECCCHHHHHCCCC WEFPRPGVIFPVRFGGRVIHFRDVLGHTRSQWVDAEEVMAMAFDVPVPGYGGKVVNNLRL CCCCCCCEEEEEECCCEEEEHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCHHHCCEEE WSAKSTREFDLKYFNAGNYIEAVRDKNESETLSKVLYPSDMTDRGKELRFKQEYFFVAAS ECCCCCCEECEEEECCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCHHCEEHHHHHHHHHH IQDILARFRKSHSDWALLPDKVAIQLNDTHPALVVAELMRVLVDEHQIEWNKAWDLVRGC HHHHHHHHHCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH CAYTNHTLLPEALETWSIDLFERVLPRHLEIVFALNHEFLQSVRYRHPGDSELLRRVSLI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHCCCCCHHHHHHHHHHH AEGHERRVRMGHLAVIGSHKVNGVAAIHTGLMKSTIFSDFEHLSPGKITNKTNGVTPRRW HCCHHHHEEECEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE LLAANPTLSALITSKIGDGWITDLDKLHKLEPLADDPAFRKAFAAVKRANKERLAAMLSQ EEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH RLGVEVEVESLFDVQVKRIHEYKRQLLNVLHVITRYGRIRSNPLLNPVPRTVIIGGKAAP HCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCC GYHIAKLIIKLVNDVAEVINNDPLVGAKLKLIFVPNYNVSTAELVMPAADLSEQISTAGT CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHCCHHHHHHHHHHCCC EASGTGNMKMSMNGALTIGTWDGANVEICEEVGEENMFLFGLSAQDVARRRVDGYDAVAA CCCCCCCEEEEECCEEEEECCCCCCHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCEEE VKADPDLTWALEMIGSGFFSPDQPDRFRPLVDILTTGGDHYLLSADFPLYMAAQERVDQT EECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH YRDPEEWTRKAILNVARMGKFSSDRTVAEYAREIWGAL CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKNAKPPVVRLLGDDLASIKEAIGSHLLYTVGKEPINATARDWFMAAAHTVRDRVTEHWM CCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH PTLNRYYREDSKRVYYLSMEFLIGRTLVNSLINLGLYDTVRQAITDLGQDFDEVAAWEVE HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH AALGNGGLGRLAACLLDSMATIGVPGFGYGIRYDYGMFTQHVDNGWQVESPENWLRYGNP HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHCCCCCEECCCHHHHHCCCC WEFPRPGVIFPVRFGGRVIHFRDVLGHTRSQWVDAEEVMAMAFDVPVPGYGGKVVNNLRL CCCCCCCEEEEEECCCEEEEHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCHHHCCEEE WSAKSTREFDLKYFNAGNYIEAVRDKNESETLSKVLYPSDMTDRGKELRFKQEYFFVAAS ECCCCCCEECEEEECCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCHHCEEHHHHHHHHHH IQDILARFRKSHSDWALLPDKVAIQLNDTHPALVVAELMRVLVDEHQIEWNKAWDLVRGC HHHHHHHHHCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH CAYTNHTLLPEALETWSIDLFERVLPRHLEIVFALNHEFLQSVRYRHPGDSELLRRVSLI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHCCCCCHHHHHHHHHHH AEGHERRVRMGHLAVIGSHKVNGVAAIHTGLMKSTIFSDFEHLSPGKITNKTNGVTPRRW HCCHHHHEEECEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE LLAANPTLSALITSKIGDGWITDLDKLHKLEPLADDPAFRKAFAAVKRANKERLAAMLSQ EEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH RLGVEVEVESLFDVQVKRIHEYKRQLLNVLHVITRYGRIRSNPLLNPVPRTVIIGGKAAP HCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCC GYHIAKLIIKLVNDVAEVINNDPLVGAKLKLIFVPNYNVSTAELVMPAADLSEQISTAGT CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHCCHHHHHHHHHHCCC EASGTGNMKMSMNGALTIGTWDGANVEICEEVGEENMFLFGLSAQDVARRRVDGYDAVAA CCCCCCCEEEEECCEEEEECCCCCCHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCEEE VKADPDLTWALEMIGSGFFSPDQPDRFRPLVDILTTGGDHYLLSADFPLYMAAQERVDQT EECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH YRDPEEWTRKAILNVARMGKFSSDRTVAEYAREIWGAL CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]