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The map label for this gene is cya [H]

Identifier: 83312139

GI number: 83312139

Start: 3280374

End: 3282029

Strand: Reverse

Name: cya [H]

Synonym: amb3040

Alternate gene names: 83312139

Gene position: 3282029-3280374 (Counterclockwise)

Preceding gene: 83312140

Following gene: 83312136

Centisome position: 66.07

GC content: 69.69

Gene sequence:

>1656_bases
ATGGTAGCCTTGGGGATTCGCGCCGACCTGCGCCTTGCCGGGGCGCTGGTCATTCTGGCCTTTGTCGTCTGTCACCTCGC
CAATCACATGCTGGCCCTGGTTTCGCTGGACGCCGCCATGGCCGGGCACGAAATCCTGATGGAGCCGTGGGAGGGCGCCC
TGGGCGGCGGGTTGCTGATGGCCGCCGGTCTCACTCACTACGCCAACGCCCTGTGGGCGGTTTATGAGCGCCGGACCCTG
CGCATGGGCGGGTCCGAAGCCTGGCAATTGGGCCTCGGCCTGCTGATTCCCTTCCTGATGATGATTCATCTCGCCGGCAC
CGGGCTGGGCGAGGCGTTGCTGGATCTGGAGCCCGGCTATCCCTCGGTGCTGCTGGGCCAATGGGTGATGAGCCCCTGGA
GGGGCTTGGCGCAGGCGATTCTGGTCCTGGTGGTGTGGGGGCACGCCTGTTCCGGGCTGCATCTGCGCTACGGTGGCCGC
GACCGGTACGAGAGGGCCAAGCCCTGGCTGCTGGCCCTGGCGGTGGTGATTCCCACCCTGGCCCTGGCCGGCTGGGTGTC
CGGCGGCGCGCAGGTGATGCGCTCGGCGGCCGATCCCGCCTGGACCGGCCGGGTGTTGGCCGAGGCGCGCATGGGGCCGT
CCACCCTGGACGACACCCTGCGCCTGGCCCTGGCGGGGATGGGGTTGCATCTGCTGCTGATCGCCACTCCCTTCGCCGGC
CGTCTCCTGCGCCATGTGGGGGGCGGCAGGCGGCCGCAACTCACCCATTCCAACGGCAGGGTGATCCGGATGATGCCCGG
CTCCACGGTGTTGGAGGCGTTGCAGGATCACGCCATCGCCCATGCCTCGGCCTGTGGCGGCAAGGGGCGCTGCACCACCT
GTCGCGTTCGGGTGCGCAGCGGGGTGGAGAAGCTGCCCAGTCCCGGCCCCCTGGAGGCCAATGCCCTGGGACGGATCGAG
GCGCCGCCCGAGGTGCGTCTGGCCTGCCAGTTGCGCCCCGAGCACGACCTGACCATCCTGCCGCTGCTGCCCTCCGACGC
GGTGGCTGCCGACGGGCGCCTGCATGGCGGCCTGGACGGCCGCGAGCGCCAGATCGTGGTGGTGTTCATCGACCTGCGCG
GCTCGACCACCCTGGGCGAGGCCAAGATGCCCTATGACATGCTGTTCATCCTGCACCGGTTCTTCCAGCAGATGACCAGG
GCGCTGACGGCGACGGGCGGGCATTATTCCAATTTCACCGGCGACGGGCTGATGGCGCTTTACGGGCTGAAGGGCAACGA
TTCCGCCAAGGCGGTGACGGCGGCCCTGGCCGGCGCGCGCGAGATGGTCGCCGGGCTGGACAAGCTGAACGCCGAGCTGG
CCATGGAGCTGGAGGCGCCGCTGCGCATGGGGATCGGCATCCATTACGGCCAGGCCATCGTCGGCACCATGGGGCCGCCC
GGCGCCCAGATCGTCAGCGCCATCGGCGATACGGTCAACACCACGGCCCGGCTCGAGGGACTGACCAAGGACCATGATTG
CCTGCTGGTGCTGTCGGCGGCGGCGGCCGAGGCAGGAGGGCTGAGCTTTCCCGGCATTCCCCGCCATCAGGTGGCGGTGA
AGGGCCGGGTCGAGGCGGTGGAGTTCTACGCCTTCGGAGAGATTCCCGGCCGGTAG

Upstream 100 bases:

>100_bases
AGCGTTCCTTCCGCCTGTACGTCCGGGTGGCGCGGCTGGAAGAGATGCTGGTGCAGCGGGTTCTGCACTGATCCTGCTTT
GACCGGGGGCACGGAGCCAC

Downstream 100 bases:

>100_bases
ACCCTCTGCCGCCTCAGCGCCAGAGCACTTCCCACAGCTGGAACTTGTCGCGGAAGCCCTTCAGCGCGTGCATGCCGCCA
TCGGTGAAGGCTCCCGTGCC

Product: ferredoxin

Products: NA

Alternate protein names: ATP pyrophosphate-lyase; Adenylyl cyclase [H]

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MVALGIRADLRLAGALVILAFVVCHLANHMLALVSLDAAMAGHEILMEPWEGALGGGLLMAAGLTHYANALWAVYERRTL
RMGGSEAWQLGLGLLIPFLMMIHLAGTGLGEALLDLEPGYPSVLLGQWVMSPWRGLAQAILVLVVWGHACSGLHLRYGGR
DRYERAKPWLLALAVVIPTLALAGWVSGGAQVMRSAADPAWTGRVLAEARMGPSTLDDTLRLALAGMGLHLLLIATPFAG
RLLRHVGGGRRPQLTHSNGRVIRMMPGSTVLEALQDHAIAHASACGGKGRCTTCRVRVRSGVEKLPSPGPLEANALGRIE
APPEVRLACQLRPEHDLTILPLLPSDAVAADGRLHGGLDGRERQIVVVFIDLRGSTTLGEAKMPYDMLFILHRFFQQMTR
ALTATGGHYSNFTGDGLMALYGLKGNDSAKAVTAALAGAREMVAGLDKLNAELAMELEAPLRMGIGIHYGQAIVGTMGPP
GAQIVSAIGDTVNTTARLEGLTKDHDCLLVLSAAAAEAGGLSFPGIPRHQVAVKGRVEAVEFYAFGEIPGR

Sequences:

>Translated_551_residues
MVALGIRADLRLAGALVILAFVVCHLANHMLALVSLDAAMAGHEILMEPWEGALGGGLLMAAGLTHYANALWAVYERRTL
RMGGSEAWQLGLGLLIPFLMMIHLAGTGLGEALLDLEPGYPSVLLGQWVMSPWRGLAQAILVLVVWGHACSGLHLRYGGR
DRYERAKPWLLALAVVIPTLALAGWVSGGAQVMRSAADPAWTGRVLAEARMGPSTLDDTLRLALAGMGLHLLLIATPFAG
RLLRHVGGGRRPQLTHSNGRVIRMMPGSTVLEALQDHAIAHASACGGKGRCTTCRVRVRSGVEKLPSPGPLEANALGRIE
APPEVRLACQLRPEHDLTILPLLPSDAVAADGRLHGGLDGRERQIVVVFIDLRGSTTLGEAKMPYDMLFILHRFFQQMTR
ALTATGGHYSNFTGDGLMALYGLKGNDSAKAVTAALAGAREMVAGLDKLNAELAMELEAPLRMGIGIHYGQAIVGTMGPP
GAQIVSAIGDTVNTTARLEGLTKDHDCLLVLSAAAAEAGGLSFPGIPRHQVAVKGRVEAVEFYAFGEIPGR
>Mature_551_residues
MVALGIRADLRLAGALVILAFVVCHLANHMLALVSLDAAMAGHEILMEPWEGALGGGLLMAAGLTHYANALWAVYERRTL
RMGGSEAWQLGLGLLIPFLMMIHLAGTGLGEALLDLEPGYPSVLLGQWVMSPWRGLAQAILVLVVWGHACSGLHLRYGGR
DRYERAKPWLLALAVVIPTLALAGWVSGGAQVMRSAADPAWTGRVLAEARMGPSTLDDTLRLALAGMGLHLLLIATPFAG
RLLRHVGGGRRPQLTHSNGRVIRMMPGSTVLEALQDHAIAHASACGGKGRCTTCRVRVRSGVEKLPSPGPLEANALGRIE
APPEVRLACQLRPEHDLTILPLLPSDAVAADGRLHGGLDGRERQIVVVFIDLRGSTTLGEAKMPYDMLFILHRFFQQMTR
ALTATGGHYSNFTGDGLMALYGLKGNDSAKAVTAALAGAREMVAGLDKLNAELAMELEAPLRMGIGIHYGQAIVGTMGPP
GAQIVSAIGDTVNTTARLEGLTKDHDCLLVLSAAAAEAGGLSFPGIPRHQVAVKGRVEAVEFYAFGEIPGR

Specific function: May function as a membrane-localized receptor protein [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HAMP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00211 Guanylate_cyc; PF00672 HAMP [H]

EC number: =4.6.1.1 [H]

Molecular weight: Translated: 58350; Mature: 58350

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS50125 GUANYLATE_CYCLASES_2 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALGIRADLRLAGALVILAFVVCHLANHMLALVSLDAAMAGHEILMEPWEGALGGGLLM
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHH
AAGLTHYANALWAVYERRTLRMGGSEAWQLGLGLLIPFLMMIHLAGTGLGEALLDLEPGY
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
PSVLLGQWVMSPWRGLAQAILVLVVWGHACSGLHLRYGGRDRYERAKPWLLALAVVIPTL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHHHHHHH
ALAGWVSGGAQVMRSAADPAWTGRVLAEARMGPSTLDDTLRLALAGMGLHLLLIATPFAG
HHHHHHCHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH
RLLRHVGGGRRPQLTHSNGRVIRMMPGSTVLEALQDHAIAHASACGGKGRCTTCRVRVRS
HHHHHHCCCCCCCEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHH
GVEKLPSPGPLEANALGRIEAPPEVRLACQLRPEHDLTILPLLPSDAVAADGRLHGGLDG
HHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCC
RERQIVVVFIDLRGSTTLGEAKMPYDMLFILHRFFQQMTRALTATGGHYSNFTGDGLMAL
CCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
YGLKGNDSAKAVTAALAGAREMVAGLDKLNAELAMELEAPLRMGIGIHYGQAIVGTMGPP
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCHHHCCEEEECCEEEECCCCC
GAQIVSAIGDTVNTTARLEGLTKDHDCLLVLSAAAAEAGGLSFPGIPRHQVAVKGRVEAV
HHHHHHHHCCHHCCHHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCEEEECCCEEEE
EFYAFGEIPGR
EEEEECCCCCC
>Mature Secondary Structure
MVALGIRADLRLAGALVILAFVVCHLANHMLALVSLDAAMAGHEILMEPWEGALGGGLLM
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHH
AAGLTHYANALWAVYERRTLRMGGSEAWQLGLGLLIPFLMMIHLAGTGLGEALLDLEPGY
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
PSVLLGQWVMSPWRGLAQAILVLVVWGHACSGLHLRYGGRDRYERAKPWLLALAVVIPTL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHHHHHHH
ALAGWVSGGAQVMRSAADPAWTGRVLAEARMGPSTLDDTLRLALAGMGLHLLLIATPFAG
HHHHHHCHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH
RLLRHVGGGRRPQLTHSNGRVIRMMPGSTVLEALQDHAIAHASACGGKGRCTTCRVRVRS
HHHHHHCCCCCCCEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHH
GVEKLPSPGPLEANALGRIEAPPEVRLACQLRPEHDLTILPLLPSDAVAADGRLHGGLDG
HHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCC
RERQIVVVFIDLRGSTTLGEAKMPYDMLFILHRFFQQMTRALTATGGHYSNFTGDGLMAL
CCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
YGLKGNDSAKAVTAALAGAREMVAGLDKLNAELAMELEAPLRMGIGIHYGQAIVGTMGPP
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCHHHCCEEEECCEEEECCCCC
GAQIVSAIGDTVNTTARLEGLTKDHDCLLVLSAAAAEAGGLSFPGIPRHQVAVKGRVEAV
HHHHHHHHCCHHCCHHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCEEEECCCEEEE
EFYAFGEIPGR
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7601856 [H]