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The map label for this gene is dcrA [H]

Identifier: 83312093

GI number: 83312093

Start: 3231880

End: 3233103

Strand: Reverse

Name: dcrA [H]

Synonym: amb2994

Alternate gene names: 83312093

Gene position: 3233103-3231880 (Counterclockwise)

Preceding gene: 83312118

Following gene: 83312090

Centisome position: 65.09

GC content: 67.4

Gene sequence:

>1224_bases
ATGCCGCCGCCCAGGCCTCCGACAACGTCAATTCCGGTGGCGGCGGGCGCCGAGGAATTGTCGGCCTCCATCAAGGAAAT
CGGCCGCCGGGTCAGCCATTCCAGTTCCATGGCCCGCAACGCGGCCCGCGAATCCGAGGAAGCCACCGAAATCGTGCGCG
GTCTGGCCGAGGCCGCTCAGCGCATCGGCGAGGTGGTGGACCTGATCAACTCCATCGCCGCCCAGACCAATCTGCTGGCG
CTGAACGCCACCATCGAGGCGGCGCGGGCCGGCGAGGCGGGGAAGGGCTTCGCGGTCGTGGCGGGCGAGGTCAAGACTCT
GGCCACCCAGACCGCCAAGGCCACCGAGGAGATCGCCAGCCAGATCGGCGTGGTGCAAAGCCGCACCAGCGCGGCGGTGG
GCGCCATCGCCCATATCAGCGGCACCATCAGCGAGATCGACGCCATCTCGGCCGAGATCACCCAGGCGGTGGACCAGCAG
GATGCCGCCACCCAGGAAATCGCCCGCAACGTCCAGCAGGCGGCGGTGGGGGCGCTGACGGTGACCGACAGCATCCAATC
GGTCAGCGCCGCCACCTCGTCCAGCGGCCAGATCGCCACCGACGTGCTGGATTCCGCCCGGCAACTGGTGGCCAAGGCGG
ATTCGCTGCATGCCGGGGTGGATTCATTCCTGGCCGCCATCAAGAACGAGGAACAGATCACCCATTCCGACGATCTGGCC
TTCGCCGATTATGTCCGGGCCGGGGCCGCCGATCTGGCCCGCCGGCTGGAAGGCGCGGTGGAGCGGGGCGAGATCGGCCT
CGACGACCTGTTCGACGACTCCTACCAGCCCATTCCCGGCACCTCGCCCCAGCAGGTTACCACCCGCTTCACCGAACTGG
CCGACCGGTTATTCCCGGAAATTCAGGAAAAGGCCCTGGTCCAGTTCCCCAAGGCGGTGTTCTGCGTCGGCGTGGATCGC
AACGGCTATCTCCCCACCCACAATGCCAAGTTCTCCCAGCCCCAGGGCAACGACCCGGTGTGGAACGACGCCAATTGCCG
CAATCGCCGGATGTTCACCGATCCCACCGGCCTGGCCGCCGCCCGCAACGCCGCCAAGCCGTCCCTGGTGCAAAGCTATC
GCCGCCAGATGGGCGACAAGAGCGTCCTGATGATCGATGTCTCGTCGCCCATCATGATCCGCGGCCGCCATTGGGGGGCC
TTGCGCCTGGGCTATGCGGTCTGA

Upstream 100 bases:

>100_bases
CTGGAGGCGGTGGTCGACGCCTCCGGCCACATGCAGAAGACGGCGGGCGAGATGGAGTCCATCTCCGAAACGGTGAAGCT
GCAATCCGAGGCGGTGTCCA

Downstream 100 bases:

>100_bases
TTCATTTCCTGACGGGCCGCCGCCCCGGGGCGGCAACCCGTCAGGCTCGGGTCATGTGAGGCTCAGGCGCCGGGTTCCAG
CCTGACCACGACCCGCCGGT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MPPPRPPTTSIPVAAGAEELSASIKEIGRRVSHSSSMARNAARESEEATEIVRGLAEAAQRIGEVVDLINSIAAQTNLLA
LNATIEAARAGEAGKGFAVVAGEVKTLATQTAKATEEIASQIGVVQSRTSAAVGAIAHISGTISEIDAISAEITQAVDQQ
DAATQEIARNVQQAAVGALTVTDSIQSVSAATSSSGQIATDVLDSARQLVAKADSLHAGVDSFLAAIKNEEQITHSDDLA
FADYVRAGAADLARRLEGAVERGEIGLDDLFDDSYQPIPGTSPQQVTTRFTELADRLFPEIQEKALVQFPKAVFCVGVDR
NGYLPTHNAKFSQPQGNDPVWNDANCRNRRMFTDPTGLAAARNAAKPSLVQSYRRQMGDKSVLMIDVSSPIMIRGRHWGA
LRLGYAV

Sequences:

>Translated_407_residues
MPPPRPPTTSIPVAAGAEELSASIKEIGRRVSHSSSMARNAARESEEATEIVRGLAEAAQRIGEVVDLINSIAAQTNLLA
LNATIEAARAGEAGKGFAVVAGEVKTLATQTAKATEEIASQIGVVQSRTSAAVGAIAHISGTISEIDAISAEITQAVDQQ
DAATQEIARNVQQAAVGALTVTDSIQSVSAATSSSGQIATDVLDSARQLVAKADSLHAGVDSFLAAIKNEEQITHSDDLA
FADYVRAGAADLARRLEGAVERGEIGLDDLFDDSYQPIPGTSPQQVTTRFTELADRLFPEIQEKALVQFPKAVFCVGVDR
NGYLPTHNAKFSQPQGNDPVWNDANCRNRRMFTDPTGLAAARNAAKPSLVQSYRRQMGDKSVLMIDVSSPIMIRGRHWGA
LRLGYAV
>Mature_406_residues
PPPRPPTTSIPVAAGAEELSASIKEIGRRVSHSSSMARNAARESEEATEIVRGLAEAAQRIGEVVDLINSIAAQTNLLAL
NATIEAARAGEAGKGFAVVAGEVKTLATQTAKATEEIASQIGVVQSRTSAAVGAIAHISGTISEIDAISAEITQAVDQQD
AATQEIARNVQQAAVGALTVTDSIQSVSAATSSSGQIATDVLDSARQLVAKADSLHAGVDSFLAAIKNEEQITHSDDLAF
ADYVRAGAADLARRLEGAVERGEIGLDDLFDDSYQPIPGTSPQQVTTRFTELADRLFPEIQEKALVQFPKAVFCVGVDRN
GYLPTHNAKFSQPQGNDPVWNDANCRNRRMFTDPTGLAAARNAAKPSLVQSYRRQMGDKSVLMIDVSSPIMIRGRHWGAL
RLGYAV

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=198, Percent_Identity=34.3434343434343, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1788195, Length=183, Percent_Identity=34.9726775956284, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1788194, Length=191, Percent_Identity=36.6492146596859, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI2367378, Length=181, Percent_Identity=36.4640883977901, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1789453, Length=190, Percent_Identity=40, Blast_Score=91, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 43025; Mature: 42893

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPPRPPTTSIPVAAGAEELSASIKEIGRRVSHSSSMARNAARESEEATEIVRGLAEAAQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIGEVVDLINSIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLATQTAKATEEIAS
HHHHHHHHHHHHHHHHCEEEEECHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHH
QIGVVQSRTSAAVGAIAHISGTISEIDAISAEITQAVDQQDAATQEIARNVQQAAVGALT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTDSIQSVSAATSSSGQIATDVLDSARQLVAKADSLHAGVDSFLAAIKNEEQITHSDDLA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
FADYVRAGAADLARRLEGAVERGEIGLDDLFDDSYQPIPGTSPQQVTTRFTELADRLFPE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IQEKALVQFPKAVFCVGVDRNGYLPTHNAKFSQPQGNDPVWNDANCRNRRMFTDPTGLAA
HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHH
ARNAAKPSLVQSYRRQMGDKSVLMIDVSSPIMIRGRHWGALRLGYAV
HHCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCEEECCCCC
>Mature Secondary Structure 
PPPRPPTTSIPVAAGAEELSASIKEIGRRVSHSSSMARNAARESEEATEIVRGLAEAAQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIGEVVDLINSIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLATQTAKATEEIAS
HHHHHHHHHHHHHHHHCEEEEECHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHH
QIGVVQSRTSAAVGAIAHISGTISEIDAISAEITQAVDQQDAATQEIARNVQQAAVGALT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTDSIQSVSAATSSSGQIATDVLDSARQLVAKADSLHAGVDSFLAAIKNEEQITHSDDLA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
FADYVRAGAADLARRLEGAVERGEIGLDDLFDDSYQPIPGTSPQQVTTRFTELADRLFPE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IQEKALVQFPKAVFCVGVDRNGYLPTHNAKFSQPQGNDPVWNDANCRNRRMFTDPTGLAA
HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHH
ARNAAKPSLVQSYRRQMGDKSVLMIDVSSPIMIRGRHWGALRLGYAV
HHCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]