| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312067
Identifier: 83312067
GI number: 83312067
Start: 3197949
End: 3199403
Strand: Reverse
Name: 83312067
Synonym: amb2969
Alternate gene names: NA
Gene position: 3199403-3197949 (Counterclockwise)
Preceding gene: 83312069
Following gene: 83312066
Centisome position: 64.41
GC content: 70.72
Gene sequence:
>1455_bases ATGGCTTTGGCCTGGATCAACTGGCCCGTGCCGGTCCCCACGGCGGCACCGCCCGAGCCCGCCGCAGCCCAGGATTCCGA GCCGGGCCTGGGGATGCCGTCCGTCAGCGTGGCCGAGGGCGAAGCCGCCGCGCCGCAGCCGGCGGCGCCCGGTCTGGTGT CCTCTGCCCGGTTGTTCTCGGTGGAGCGGTTCGGCCGCTATGCCGTGGCCGCCGTCAGCCCCCACGGCACCGCGCTGCAA CTGGTCGACCGCATGGCCGGTCCCGGCGCCGAGGACGGCGTGGCGGGCAAGCGCGACGGCCGGGTCGACCTGTTTCTCGG GCCAGGGTCTCACAAGGCCATCCTGACCGCCCCGCAAAAGGCGGAAACCCCTGTCGAACTGCAGGTCCGGCCCTTCGAGG ACCTGAGCGGCGCCACGCCGCCCCGGCTGGAGGAACTGCGGACCCTCTCGGCCGAGCTGGGCGATTTGCAACAGCATTCC TATTGGCTGGAGGTAACGGCGCGGCGTCAGGTGTTCCTGGAGGCCGCCGGACGTCACCTCGCCGATTTGCGCCTGTGGAA GGACGGCACCTGGCTGGTGGAGGCCGCTCCGGTGGCCGAGACCATCGAGCCGGTTCCCGGCCGCCCCCTGGCCCTGCGCC GTCTGGTGGCCGATCTCAATCCCGGACTCTATCTGGTGGTGGCCTATGGCGGTCCCGGTGCCGCCTGGACCGATGGGGCG GGGGACAAGCCGTTCCACCTGCGCTGGGGCATTCCCTCCCTGCCGGCGGCGGTGCGGCGCCAGATGGTCACCGGGCCGTT CGGCTTCGACCGTTGGCTGGTGCCGAAGACCGCCAATTATTTCCGGCTGGAGCTGCCGCAAGCCGGCCGCGCCGCCCTGG ATGTGGCGCGCTATGCCGATGGCCATCCCCAGCCGGGCGATCACGTCGCCCTGGACAAGACCGCGCGCGAGCCGGTGGCC GAGATCGGCAATATGGACGGGAGCACCCAGCGTCTGGTGACGGTGGAGCGCGCTCCTGGCGAATCCTATGTGCTGCAGCA CTATCTCAGCAGCCGCGTCTATACCTTCAGCGCCACCGGCGATTATCTCATCTCGGCGCTGCGTCCGGGGACCGGCGAGG ACGACGCCGATCTCGGCGCCATCCTGACCGAGATGGGGGGCGGGACCGAGCGGGTGGTAGCCAGTTCGGCCCTGCGCCTG CTTCCCGGCACCGCCTGGACCCGGCGCTTCAACCTGCTTGACGCGGTCACCTTGTATGTGGACGTGGCCGAGCCGGGGCG CTTCGTCATGACCGGCGGCGGGGTCGAGGCGGAGATCGCCGTCACCCCGTTCATCCGCCAGCCCGACATGAAGATCGCCG CGGCGGCCGTCGGAGGCGGCAGCTGGAATCTGGATCGCGGCCTGCATGTGGTCTCCATCACGCCCCGGCCCGAACAGAAG GGCATCCTTGCCTGA
Upstream 100 bases:
>100_bases CATCTTGGCCGCCGGTGACAGGGGGGGGGGGATGGCCAGGACTGCGACGTGCGGATCTCGGGGAGTGGCCGGCTTGCTGG CCTTGGTCGCGGCCGCCTCC
Downstream 100 bases:
>100_bases CCATCAAGGGCGAGGGGGCCGCCGACCCGGTGGCCGAGGCCCCGCCCGTGACCGGCGCCACCTTCACGCCGGTGGCGTTG AAGGCGGACAAGAGCTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MALAWINWPVPVPTAAPPEPAAAQDSEPGLGMPSVSVAEGEAAAPQPAAPGLVSSARLFSVERFGRYAVAAVSPHGTALQ LVDRMAGPGAEDGVAGKRDGRVDLFLGPGSHKAILTAPQKAETPVELQVRPFEDLSGATPPRLEELRTLSAELGDLQQHS YWLEVTARRQVFLEAAGRHLADLRLWKDGTWLVEAAPVAETIEPVPGRPLALRRLVADLNPGLYLVVAYGGPGAAWTDGA GDKPFHLRWGIPSLPAAVRRQMVTGPFGFDRWLVPKTANYFRLELPQAGRAALDVARYADGHPQPGDHVALDKTAREPVA EIGNMDGSTQRLVTVERAPGESYVLQHYLSSRVYTFSATGDYLISALRPGTGEDDADLGAILTEMGGGTERVVASSALRL LPGTAWTRRFNLLDAVTLYVDVAEPGRFVMTGGGVEAEIAVTPFIRQPDMKIAAAAVGGGSWNLDRGLHVVSITPRPEQK GILA
Sequences:
>Translated_484_residues MALAWINWPVPVPTAAPPEPAAAQDSEPGLGMPSVSVAEGEAAAPQPAAPGLVSSARLFSVERFGRYAVAAVSPHGTALQ LVDRMAGPGAEDGVAGKRDGRVDLFLGPGSHKAILTAPQKAETPVELQVRPFEDLSGATPPRLEELRTLSAELGDLQQHS YWLEVTARRQVFLEAAGRHLADLRLWKDGTWLVEAAPVAETIEPVPGRPLALRRLVADLNPGLYLVVAYGGPGAAWTDGA GDKPFHLRWGIPSLPAAVRRQMVTGPFGFDRWLVPKTANYFRLELPQAGRAALDVARYADGHPQPGDHVALDKTAREPVA EIGNMDGSTQRLVTVERAPGESYVLQHYLSSRVYTFSATGDYLISALRPGTGEDDADLGAILTEMGGGTERVVASSALRL LPGTAWTRRFNLLDAVTLYVDVAEPGRFVMTGGGVEAEIAVTPFIRQPDMKIAAAAVGGGSWNLDRGLHVVSITPRPEQK GILA >Mature_483_residues ALAWINWPVPVPTAAPPEPAAAQDSEPGLGMPSVSVAEGEAAAPQPAAPGLVSSARLFSVERFGRYAVAAVSPHGTALQL VDRMAGPGAEDGVAGKRDGRVDLFLGPGSHKAILTAPQKAETPVELQVRPFEDLSGATPPRLEELRTLSAELGDLQQHSY WLEVTARRQVFLEAAGRHLADLRLWKDGTWLVEAAPVAETIEPVPGRPLALRRLVADLNPGLYLVVAYGGPGAAWTDGAG DKPFHLRWGIPSLPAAVRRQMVTGPFGFDRWLVPKTANYFRLELPQAGRAALDVARYADGHPQPGDHVALDKTAREPVAE IGNMDGSTQRLVTVERAPGESYVLQHYLSSRVYTFSATGDYLISALRPGTGEDDADLGAILTEMGGGTERVVASSALRLL PGTAWTRRFNLLDAVTLYVDVAEPGRFVMTGGGVEAEIAVTPFIRQPDMKIAAAAVGGGSWNLDRGLHVVSITPRPEQKG ILA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51523; Mature: 51392
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAWINWPVPVPTAAPPEPAAAQDSEPGLGMPSVSVAEGEAAAPQPAAPGLVSSARLFS CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHH VERFGRYAVAAVSPHGTALQLVDRMAGPGAEDGVAGKRDGRVDLFLGPGSHKAILTAPQK HHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCC AETPVELQVRPFEDLSGATPPRLEELRTLSAELGDLQQHSYWLEVTARRQVFLEAAGRHL CCCCEEEEEECCHHCCCCCCHHHHHHHHHHHHHCCHHHCCEEEEEEHHHHHHHHHHCCCE ADLRLWKDGTWLVEAAPVAETIEPVPGRPLALRRLVADLNPGLYLVVAYGGPGAAWTDGA EEEEEECCCCEEEECCCHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC GDKPFHLRWGIPSLPAAVRRQMVTGPFGFDRWLVPKTANYFRLELPQAGRAALDVARYAD CCCCEEEECCCCCCCHHHHHHHHCCCCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHCC GHPQPGDHVALDKTAREPVAEIGNMDGSTQRLVTVERAPGESYVLQHYLSSRVYTFSATG CCCCCCCCEEECHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECCH DYLISALRPGTGEDDADLGAILTEMGGGTERVVASSALRLLPGTAWTRRFNLLDAVTLYV HHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEEE DVAEPGRFVMTGGGVEAEIAVTPFIRQPDMKIAAAAVGGGSWNLDRGLHVVSITPRPEQK EECCCCEEEEECCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCC GILA CCCC >Mature Secondary Structure ALAWINWPVPVPTAAPPEPAAAQDSEPGLGMPSVSVAEGEAAAPQPAAPGLVSSARLFS EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHH VERFGRYAVAAVSPHGTALQLVDRMAGPGAEDGVAGKRDGRVDLFLGPGSHKAILTAPQK HHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCC AETPVELQVRPFEDLSGATPPRLEELRTLSAELGDLQQHSYWLEVTARRQVFLEAAGRHL CCCCEEEEEECCHHCCCCCCHHHHHHHHHHHHHCCHHHCCEEEEEEHHHHHHHHHHCCCE ADLRLWKDGTWLVEAAPVAETIEPVPGRPLALRRLVADLNPGLYLVVAYGGPGAAWTDGA EEEEEECCCCEEEECCCHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC GDKPFHLRWGIPSLPAAVRRQMVTGPFGFDRWLVPKTANYFRLELPQAGRAALDVARYAD CCCCEEEECCCCCCCHHHHHHHHCCCCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHCC GHPQPGDHVALDKTAREPVAEIGNMDGSTQRLVTVERAPGESYVLQHYLSSRVYTFSATG CCCCCCCCEEECHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECCH DYLISALRPGTGEDDADLGAILTEMGGGTERVVASSALRLLPGTAWTRRFNLLDAVTLYV HHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEEE DVAEPGRFVMTGGGVEAEIAVTPFIRQPDMKIAAAAVGGGSWNLDRGLHVVSITPRPEQK EECCCCEEEEECCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCC GILA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA