| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is norD [H]
Identifier: 83312041
GI number: 83312041
Start: 3144989
End: 3146881
Strand: Reverse
Name: norD [H]
Synonym: amb2942
Alternate gene names: 83312041
Gene position: 3146881-3144989 (Counterclockwise)
Preceding gene: 83312042
Following gene: 83312040
Centisome position: 63.35
GC content: 69.89
Gene sequence:
>1893_bases ATGAGCTGGCTGTCCTTCCTGGAACTGGAGGAGCGGGTCGGCACCCTCTGGCACCGCTGGGTCGGGGAGAAGGCCAGCTG GCCGTCCTTCCCCGAGGCCCAGGTCAGCCTTGATTCCGTGCGGCCCCGCCTCGCCGTGTTCTTTCGCGGGCTGGGCGGCG ATCGCGGCGTGCAGATCGCCAATGCGGCGGCCCGGGAGTCCGGCCACCGGCTCAGCCTGCGCCAGCGCATCGGCATGGAA ACTGAGCGGCTGGTCAGTGCCAGCCGCGACCAGTCCAGCCTGTCCCTGCCGCCCACCTTGGCGCTGTTTCCCGCCGCCGA ACTGAATCGCGACCTCTATTTCTGGCTGGCCGCCTATTTCGCGGTGCTGGAGCCCCTGGACCTGCCCTCCGATCCCCTGG CGGCCGATCTGGCCCGCCTGGCCCAGGCGTCGCGGACCACCAGGGCGGTGCTGCGGCGCTTTCCCGGCTTGGCGGCACGC CATGGCGCCCTGTGCGCGGCGTTGCTGGAGGCCCGGCCCCGGCGCAGCCTCTCGGGCGCAGAGGCCAAGGTAGAGGCGGC GGTGCTGTCCCTGCTGGCCGATCCCGGGGCGGCGCTGCCTCCCTTGCCGGCCAAGGCGCCGCGCGAATACCTGCCCCTCC TGCCGGTGCCCCTGTGGGGCGAATGCCTGCCCGGCATGGCCGGCGCCCTGTCGCCGGCCGATGCCGAGCCCGAGCGGGGC GGCGAGGGCGAGGAGAGCGACGAGCAGGAGACCCGGCGCAAGGCCGAGCGCCGCGACGAGGACAACGCCGACCGCAAGGA CCCGCTGCTGCTCAATCGGTTCGAGAAGATCCTGGCCATGGCCGACATGGTCAACGTCAACCGCGCCGCCGACGATACCG ACGAGGAAGAGGCCAAGAAGGCCGCCGACGACATGGAAGCCATCACCTTGTCGTCCCATTCGCGCAAGGCGGCGACCAAG CTGAAATTCGACCTGGACCTGCCGCCCGGCGCCACCGATGCCAGCCGCCTCACAGGCACGTTCCTGCTGCCTGAATGGGA TTGGCGCGCCAATGCCTACCTTCCGGACCATTGTTCCGTCCTGGTCGGCCCGGCCTCGGAAGAGGGCGAGGATTGGAGCC CCGATGCCGACGCCAAGCGGCGCATCCGGGCCGTCAAGCGCCAGTTCGAGGCGCTGCGCACCAAGCCGCAATTGCTGCGC GCCCAGGCCGATGGTCAGGAGCTGGATACCGACGCCCTGGTGCGGGCACGGGCCGATCTGGCCGCCTGCGGCACCGGCTC GGACCGGGTCTGGCTGCAGCACCGCGCCCAGGAGCGCGACCTGTCGGTGATGGTGCTGATGGATGCCTCCCTATCCACCG ATTCCTGGATCGACAACCGGCGGGTCCTGGATGTGGAGAAGGAGTCCCTGGCGGTGCTGGGCCACGGCCTTGCCGCCTGC GGCGATCCCTTCGCCGTGGCCACCTTCACCTCGCGCAAGCGTGACTGGGTCAAGGTCGACATGGTCAAGGATTTCCACGA GCCGTTCGGGGACCGGGTCCTGCGCCGCATCGGGGCGGTGCGTCCCGGTTATTACACCCGCATCGGCGCCGCGCTGCGCT ATGCGACCACCCGGCTGGAGGAGCGGCCCGAGCGGCACCGGCTGCTGCTGGTACTGACCGACGGCAAGCCCAACGACGTG GACCATTACGAAGGCCGCCACGGCGTCGAGGATACCCGGAAAGCCGTACTGGAAGCCCGCGCCAAGGGGCTGTCCGTGTT CGGCATCACCGTCGACCGCAAGGCCCAGGGCTATTTCCCCCATCTCTTCGGGCGAGGCCATTACGCCATCATCGGCCATC TGGCCCATCTGTCGGCGGCGCTTCCCAAGATCTACCGGCAGTTGGTGGCATGA
Upstream 100 bases:
>100_bases TTGCCGTCCGCGACGCCGTGCAGGTCACCATGGTCGAGCCCCTGTCCGACGACCCGGAAGTCAAGGCCGGGCTGGAAGAG GTGGTAAAGGCCATCTTCGG
Downstream 100 bases:
>100_bases GCGACGAGAGCGAAAATTGGGGCGCCCTGTCGGATTTGCCCGGCAATCCCCTGATGTGGGTGCTGATCCTCAGTGAATTG CTGGTGTTCGGCGCCTTCTT
Product: nitric oxide reductase activation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 630; Mature: 629
Protein sequence:
>630_residues MSWLSFLELEERVGTLWHRWVGEKASWPSFPEAQVSLDSVRPRLAVFFRGLGGDRGVQIANAAARESGHRLSLRQRIGME TERLVSASRDQSSLSLPPTLALFPAAELNRDLYFWLAAYFAVLEPLDLPSDPLAADLARLAQASRTTRAVLRRFPGLAAR HGALCAALLEARPRRSLSGAEAKVEAAVLSLLADPGAALPPLPAKAPREYLPLLPVPLWGECLPGMAGALSPADAEPERG GEGEESDEQETRRKAERRDEDNADRKDPLLLNRFEKILAMADMVNVNRAADDTDEEEAKKAADDMEAITLSSHSRKAATK LKFDLDLPPGATDASRLTGTFLLPEWDWRANAYLPDHCSVLVGPASEEGEDWSPDADAKRRIRAVKRQFEALRTKPQLLR AQADGQELDTDALVRARADLAACGTGSDRVWLQHRAQERDLSVMVLMDASLSTDSWIDNRRVLDVEKESLAVLGHGLAAC GDPFAVATFTSRKRDWVKVDMVKDFHEPFGDRVLRRIGAVRPGYYTRIGAALRYATTRLEERPERHRLLLVLTDGKPNDV DHYEGRHGVEDTRKAVLEARAKGLSVFGITVDRKAQGYFPHLFGRGHYAIIGHLAHLSAALPKIYRQLVA
Sequences:
>Translated_630_residues MSWLSFLELEERVGTLWHRWVGEKASWPSFPEAQVSLDSVRPRLAVFFRGLGGDRGVQIANAAARESGHRLSLRQRIGME TERLVSASRDQSSLSLPPTLALFPAAELNRDLYFWLAAYFAVLEPLDLPSDPLAADLARLAQASRTTRAVLRRFPGLAAR HGALCAALLEARPRRSLSGAEAKVEAAVLSLLADPGAALPPLPAKAPREYLPLLPVPLWGECLPGMAGALSPADAEPERG GEGEESDEQETRRKAERRDEDNADRKDPLLLNRFEKILAMADMVNVNRAADDTDEEEAKKAADDMEAITLSSHSRKAATK LKFDLDLPPGATDASRLTGTFLLPEWDWRANAYLPDHCSVLVGPASEEGEDWSPDADAKRRIRAVKRQFEALRTKPQLLR AQADGQELDTDALVRARADLAACGTGSDRVWLQHRAQERDLSVMVLMDASLSTDSWIDNRRVLDVEKESLAVLGHGLAAC GDPFAVATFTSRKRDWVKVDMVKDFHEPFGDRVLRRIGAVRPGYYTRIGAALRYATTRLEERPERHRLLLVLTDGKPNDV DHYEGRHGVEDTRKAVLEARAKGLSVFGITVDRKAQGYFPHLFGRGHYAIIGHLAHLSAALPKIYRQLVA >Mature_629_residues SWLSFLELEERVGTLWHRWVGEKASWPSFPEAQVSLDSVRPRLAVFFRGLGGDRGVQIANAAARESGHRLSLRQRIGMET ERLVSASRDQSSLSLPPTLALFPAAELNRDLYFWLAAYFAVLEPLDLPSDPLAADLARLAQASRTTRAVLRRFPGLAARH GALCAALLEARPRRSLSGAEAKVEAAVLSLLADPGAALPPLPAKAPREYLPLLPVPLWGECLPGMAGALSPADAEPERGG EGEESDEQETRRKAERRDEDNADRKDPLLLNRFEKILAMADMVNVNRAADDTDEEEAKKAADDMEAITLSSHSRKAATKL KFDLDLPPGATDASRLTGTFLLPEWDWRANAYLPDHCSVLVGPASEEGEDWSPDADAKRRIRAVKRQFEALRTKPQLLRA QADGQELDTDALVRARADLAACGTGSDRVWLQHRAQERDLSVMVLMDASLSTDSWIDNRRVLDVEKESLAVLGHGLAACG DPFAVATFTSRKRDWVKVDMVKDFHEPFGDRVLRRIGAVRPGYYTRIGAALRYATTRLEERPERHRLLLVLTDGKPNDVD HYEGRHGVEDTRKAVLEARAKGLSVFGITVDRKAQGYFPHLFGRGHYAIIGHLAHLSAALPKIYRQLVA
Specific function: Part of the operon norEFCBQD encoding nitric oxide reductase. Essential virulence factor, probably involved in the detoxification of nitric oxide (NO) produced in the macrophages during the innate response against infection [H]
COG id: COG4548
COG function: function code P; Nitric oxide reductase activation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 69723; Mature: 69592
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLSFLELEERVGTLWHRWVGEKASWPSFPEAQVSLDSVRPRLAVFFRGLGGDRGVQIA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCEEEH NAAARESGHRLSLRQRIGMETERLVSASRDQSSLSLPPTLALFPAAELNRDLYFWLAAYF HHHHHCCCCEEHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEECCHHHHCCHHHHHHHHHH AVLEPLDLPSDPLAADLARLAQASRTTRAVLRRFPGLAARHGALCAALLEARPRRSLSGA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC EAKVEAAVLSLLADPGAALPPLPAKAPREYLPLLPVPLWGECLPGMAGALSPADAEPERG HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCHHCCCCCCCCCCCCC GEGEESDEQETRRKAERRDEDNADRKDPLLLNRFEKILAMADMVNVNRAADDTDEEEAKK CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AADDMEAITLSSHSRKAATKLKFDLDLPPGATDASRLTGTFLLPEWDWRANAYLPDHCSV HHHHHHEEEECCCCHHHHHEEEEEECCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCEE LVGPASEEGEDWSPDADAKRRIRAVKRQFEALRTKPQLLRAQADGQELDTDALVRARADL EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHH AACGTGSDRVWLQHRAQERDLSVMVLMDASLSTDSWIDNRRVLDVEKESLAVLGHGLAAC HCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHCCHHHC GDPFAVATFTSRKRDWVKVDMVKDFHEPFGDRVLRRIGAVRPGYYTRIGAALRYATTRLE CCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ERPERHRLLLVLTDGKPNDVDHYEGRHGVEDTRKAVLEARAKGLSVFGITVDRKAQGYFP HCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC HLFGRGHYAIIGHLAHLSAALPKIYRQLVA HHHCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SWLSFLELEERVGTLWHRWVGEKASWPSFPEAQVSLDSVRPRLAVFFRGLGGDRGVQIA CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCEEEH NAAARESGHRLSLRQRIGMETERLVSASRDQSSLSLPPTLALFPAAELNRDLYFWLAAYF HHHHHCCCCEEHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEECCHHHHCCHHHHHHHHHH AVLEPLDLPSDPLAADLARLAQASRTTRAVLRRFPGLAARHGALCAALLEARPRRSLSGA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC EAKVEAAVLSLLADPGAALPPLPAKAPREYLPLLPVPLWGECLPGMAGALSPADAEPERG HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCHHCCCCCCCCCCCCC GEGEESDEQETRRKAERRDEDNADRKDPLLLNRFEKILAMADMVNVNRAADDTDEEEAKK CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AADDMEAITLSSHSRKAATKLKFDLDLPPGATDASRLTGTFLLPEWDWRANAYLPDHCSV HHHHHHEEEECCCCHHHHHEEEEEECCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCEE LVGPASEEGEDWSPDADAKRRIRAVKRQFEALRTKPQLLRAQADGQELDTDALVRARADL EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHH AACGTGSDRVWLQHRAQERDLSVMVLMDASLSTDSWIDNRRVLDVEKESLAVLGHGLAAC HCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHCCHHHC GDPFAVATFTSRKRDWVKVDMVKDFHEPFGDRVLRRIGAVRPGYYTRIGAALRYATTRLE CCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ERPERHRLLLVLTDGKPNDVDHYEGRHGVEDTRKAVLEARAKGLSVFGITVDRKAQGYFP HCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC HLFGRGHYAIIGHLAHLSAALPKIYRQLVA HHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA