Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is norD [H]

Identifier: 83312041

GI number: 83312041

Start: 3144989

End: 3146881

Strand: Reverse

Name: norD [H]

Synonym: amb2942

Alternate gene names: 83312041

Gene position: 3146881-3144989 (Counterclockwise)

Preceding gene: 83312042

Following gene: 83312040

Centisome position: 63.35

GC content: 69.89

Gene sequence:

>1893_bases
ATGAGCTGGCTGTCCTTCCTGGAACTGGAGGAGCGGGTCGGCACCCTCTGGCACCGCTGGGTCGGGGAGAAGGCCAGCTG
GCCGTCCTTCCCCGAGGCCCAGGTCAGCCTTGATTCCGTGCGGCCCCGCCTCGCCGTGTTCTTTCGCGGGCTGGGCGGCG
ATCGCGGCGTGCAGATCGCCAATGCGGCGGCCCGGGAGTCCGGCCACCGGCTCAGCCTGCGCCAGCGCATCGGCATGGAA
ACTGAGCGGCTGGTCAGTGCCAGCCGCGACCAGTCCAGCCTGTCCCTGCCGCCCACCTTGGCGCTGTTTCCCGCCGCCGA
ACTGAATCGCGACCTCTATTTCTGGCTGGCCGCCTATTTCGCGGTGCTGGAGCCCCTGGACCTGCCCTCCGATCCCCTGG
CGGCCGATCTGGCCCGCCTGGCCCAGGCGTCGCGGACCACCAGGGCGGTGCTGCGGCGCTTTCCCGGCTTGGCGGCACGC
CATGGCGCCCTGTGCGCGGCGTTGCTGGAGGCCCGGCCCCGGCGCAGCCTCTCGGGCGCAGAGGCCAAGGTAGAGGCGGC
GGTGCTGTCCCTGCTGGCCGATCCCGGGGCGGCGCTGCCTCCCTTGCCGGCCAAGGCGCCGCGCGAATACCTGCCCCTCC
TGCCGGTGCCCCTGTGGGGCGAATGCCTGCCCGGCATGGCCGGCGCCCTGTCGCCGGCCGATGCCGAGCCCGAGCGGGGC
GGCGAGGGCGAGGAGAGCGACGAGCAGGAGACCCGGCGCAAGGCCGAGCGCCGCGACGAGGACAACGCCGACCGCAAGGA
CCCGCTGCTGCTCAATCGGTTCGAGAAGATCCTGGCCATGGCCGACATGGTCAACGTCAACCGCGCCGCCGACGATACCG
ACGAGGAAGAGGCCAAGAAGGCCGCCGACGACATGGAAGCCATCACCTTGTCGTCCCATTCGCGCAAGGCGGCGACCAAG
CTGAAATTCGACCTGGACCTGCCGCCCGGCGCCACCGATGCCAGCCGCCTCACAGGCACGTTCCTGCTGCCTGAATGGGA
TTGGCGCGCCAATGCCTACCTTCCGGACCATTGTTCCGTCCTGGTCGGCCCGGCCTCGGAAGAGGGCGAGGATTGGAGCC
CCGATGCCGACGCCAAGCGGCGCATCCGGGCCGTCAAGCGCCAGTTCGAGGCGCTGCGCACCAAGCCGCAATTGCTGCGC
GCCCAGGCCGATGGTCAGGAGCTGGATACCGACGCCCTGGTGCGGGCACGGGCCGATCTGGCCGCCTGCGGCACCGGCTC
GGACCGGGTCTGGCTGCAGCACCGCGCCCAGGAGCGCGACCTGTCGGTGATGGTGCTGATGGATGCCTCCCTATCCACCG
ATTCCTGGATCGACAACCGGCGGGTCCTGGATGTGGAGAAGGAGTCCCTGGCGGTGCTGGGCCACGGCCTTGCCGCCTGC
GGCGATCCCTTCGCCGTGGCCACCTTCACCTCGCGCAAGCGTGACTGGGTCAAGGTCGACATGGTCAAGGATTTCCACGA
GCCGTTCGGGGACCGGGTCCTGCGCCGCATCGGGGCGGTGCGTCCCGGTTATTACACCCGCATCGGCGCCGCGCTGCGCT
ATGCGACCACCCGGCTGGAGGAGCGGCCCGAGCGGCACCGGCTGCTGCTGGTACTGACCGACGGCAAGCCCAACGACGTG
GACCATTACGAAGGCCGCCACGGCGTCGAGGATACCCGGAAAGCCGTACTGGAAGCCCGCGCCAAGGGGCTGTCCGTGTT
CGGCATCACCGTCGACCGCAAGGCCCAGGGCTATTTCCCCCATCTCTTCGGGCGAGGCCATTACGCCATCATCGGCCATC
TGGCCCATCTGTCGGCGGCGCTTCCCAAGATCTACCGGCAGTTGGTGGCATGA

Upstream 100 bases:

>100_bases
TTGCCGTCCGCGACGCCGTGCAGGTCACCATGGTCGAGCCCCTGTCCGACGACCCGGAAGTCAAGGCCGGGCTGGAAGAG
GTGGTAAAGGCCATCTTCGG

Downstream 100 bases:

>100_bases
GCGACGAGAGCGAAAATTGGGGCGCCCTGTCGGATTTGCCCGGCAATCCCCTGATGTGGGTGCTGATCCTCAGTGAATTG
CTGGTGTTCGGCGCCTTCTT

Product: nitric oxide reductase activation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 630; Mature: 629

Protein sequence:

>630_residues
MSWLSFLELEERVGTLWHRWVGEKASWPSFPEAQVSLDSVRPRLAVFFRGLGGDRGVQIANAAARESGHRLSLRQRIGME
TERLVSASRDQSSLSLPPTLALFPAAELNRDLYFWLAAYFAVLEPLDLPSDPLAADLARLAQASRTTRAVLRRFPGLAAR
HGALCAALLEARPRRSLSGAEAKVEAAVLSLLADPGAALPPLPAKAPREYLPLLPVPLWGECLPGMAGALSPADAEPERG
GEGEESDEQETRRKAERRDEDNADRKDPLLLNRFEKILAMADMVNVNRAADDTDEEEAKKAADDMEAITLSSHSRKAATK
LKFDLDLPPGATDASRLTGTFLLPEWDWRANAYLPDHCSVLVGPASEEGEDWSPDADAKRRIRAVKRQFEALRTKPQLLR
AQADGQELDTDALVRARADLAACGTGSDRVWLQHRAQERDLSVMVLMDASLSTDSWIDNRRVLDVEKESLAVLGHGLAAC
GDPFAVATFTSRKRDWVKVDMVKDFHEPFGDRVLRRIGAVRPGYYTRIGAALRYATTRLEERPERHRLLLVLTDGKPNDV
DHYEGRHGVEDTRKAVLEARAKGLSVFGITVDRKAQGYFPHLFGRGHYAIIGHLAHLSAALPKIYRQLVA

Sequences:

>Translated_630_residues
MSWLSFLELEERVGTLWHRWVGEKASWPSFPEAQVSLDSVRPRLAVFFRGLGGDRGVQIANAAARESGHRLSLRQRIGME
TERLVSASRDQSSLSLPPTLALFPAAELNRDLYFWLAAYFAVLEPLDLPSDPLAADLARLAQASRTTRAVLRRFPGLAAR
HGALCAALLEARPRRSLSGAEAKVEAAVLSLLADPGAALPPLPAKAPREYLPLLPVPLWGECLPGMAGALSPADAEPERG
GEGEESDEQETRRKAERRDEDNADRKDPLLLNRFEKILAMADMVNVNRAADDTDEEEAKKAADDMEAITLSSHSRKAATK
LKFDLDLPPGATDASRLTGTFLLPEWDWRANAYLPDHCSVLVGPASEEGEDWSPDADAKRRIRAVKRQFEALRTKPQLLR
AQADGQELDTDALVRARADLAACGTGSDRVWLQHRAQERDLSVMVLMDASLSTDSWIDNRRVLDVEKESLAVLGHGLAAC
GDPFAVATFTSRKRDWVKVDMVKDFHEPFGDRVLRRIGAVRPGYYTRIGAALRYATTRLEERPERHRLLLVLTDGKPNDV
DHYEGRHGVEDTRKAVLEARAKGLSVFGITVDRKAQGYFPHLFGRGHYAIIGHLAHLSAALPKIYRQLVA
>Mature_629_residues
SWLSFLELEERVGTLWHRWVGEKASWPSFPEAQVSLDSVRPRLAVFFRGLGGDRGVQIANAAARESGHRLSLRQRIGMET
ERLVSASRDQSSLSLPPTLALFPAAELNRDLYFWLAAYFAVLEPLDLPSDPLAADLARLAQASRTTRAVLRRFPGLAARH
GALCAALLEARPRRSLSGAEAKVEAAVLSLLADPGAALPPLPAKAPREYLPLLPVPLWGECLPGMAGALSPADAEPERGG
EGEESDEQETRRKAERRDEDNADRKDPLLLNRFEKILAMADMVNVNRAADDTDEEEAKKAADDMEAITLSSHSRKAATKL
KFDLDLPPGATDASRLTGTFLLPEWDWRANAYLPDHCSVLVGPASEEGEDWSPDADAKRRIRAVKRQFEALRTKPQLLRA
QADGQELDTDALVRARADLAACGTGSDRVWLQHRAQERDLSVMVLMDASLSTDSWIDNRRVLDVEKESLAVLGHGLAACG
DPFAVATFTSRKRDWVKVDMVKDFHEPFGDRVLRRIGAVRPGYYTRIGAALRYATTRLEERPERHRLLLVLTDGKPNDVD
HYEGRHGVEDTRKAVLEARAKGLSVFGITVDRKAQGYFPHLFGRGHYAIIGHLAHLSAALPKIYRQLVA

Specific function: Part of the operon norEFCBQD encoding nitric oxide reductase. Essential virulence factor, probably involved in the detoxification of nitric oxide (NO) produced in the macrophages during the innate response against infection [H]

COG id: COG4548

COG function: function code P; Nitric oxide reductase activation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 69723; Mature: 69592

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLSFLELEERVGTLWHRWVGEKASWPSFPEAQVSLDSVRPRLAVFFRGLGGDRGVQIA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCEEEH
NAAARESGHRLSLRQRIGMETERLVSASRDQSSLSLPPTLALFPAAELNRDLYFWLAAYF
HHHHHCCCCEEHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEECCHHHHCCHHHHHHHHHH
AVLEPLDLPSDPLAADLARLAQASRTTRAVLRRFPGLAARHGALCAALLEARPRRSLSGA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
EAKVEAAVLSLLADPGAALPPLPAKAPREYLPLLPVPLWGECLPGMAGALSPADAEPERG
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCHHCCCCCCCCCCCCC
GEGEESDEQETRRKAERRDEDNADRKDPLLLNRFEKILAMADMVNVNRAADDTDEEEAKK
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
AADDMEAITLSSHSRKAATKLKFDLDLPPGATDASRLTGTFLLPEWDWRANAYLPDHCSV
HHHHHHEEEECCCCHHHHHEEEEEECCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCEE
LVGPASEEGEDWSPDADAKRRIRAVKRQFEALRTKPQLLRAQADGQELDTDALVRARADL
EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHH
AACGTGSDRVWLQHRAQERDLSVMVLMDASLSTDSWIDNRRVLDVEKESLAVLGHGLAAC
HCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHCCHHHC
GDPFAVATFTSRKRDWVKVDMVKDFHEPFGDRVLRRIGAVRPGYYTRIGAALRYATTRLE
CCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ERPERHRLLLVLTDGKPNDVDHYEGRHGVEDTRKAVLEARAKGLSVFGITVDRKAQGYFP
HCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC
HLFGRGHYAIIGHLAHLSAALPKIYRQLVA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SWLSFLELEERVGTLWHRWVGEKASWPSFPEAQVSLDSVRPRLAVFFRGLGGDRGVQIA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCEEEH
NAAARESGHRLSLRQRIGMETERLVSASRDQSSLSLPPTLALFPAAELNRDLYFWLAAYF
HHHHHCCCCEEHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEECCHHHHCCHHHHHHHHHH
AVLEPLDLPSDPLAADLARLAQASRTTRAVLRRFPGLAARHGALCAALLEARPRRSLSGA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
EAKVEAAVLSLLADPGAALPPLPAKAPREYLPLLPVPLWGECLPGMAGALSPADAEPERG
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCHHCCCCCCCCCCCCC
GEGEESDEQETRRKAERRDEDNADRKDPLLLNRFEKILAMADMVNVNRAADDTDEEEAKK
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
AADDMEAITLSSHSRKAATKLKFDLDLPPGATDASRLTGTFLLPEWDWRANAYLPDHCSV
HHHHHHEEEECCCCHHHHHEEEEEECCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCEE
LVGPASEEGEDWSPDADAKRRIRAVKRQFEALRTKPQLLRAQADGQELDTDALVRARADL
EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHH
AACGTGSDRVWLQHRAQERDLSVMVLMDASLSTDSWIDNRRVLDVEKESLAVLGHGLAAC
HCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHCCHHHC
GDPFAVATFTSRKRDWVKVDMVKDFHEPFGDRVLRRIGAVRPGYYTRIGAALRYATTRLE
CCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ERPERHRLLLVLTDGKPNDVDHYEGRHGVEDTRKAVLEARAKGLSVFGITVDRKAQGYFP
HCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC
HLFGRGHYAIIGHLAHLSAALPKIYRQLVA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA