| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83312028
Identifier: 83312028
GI number: 83312028
Start: 3123050
End: 3123850
Strand: Reverse
Name: 83312028
Synonym: amb2929
Alternate gene names: NA
Gene position: 3123850-3123050 (Counterclockwise)
Preceding gene: 83312029
Following gene: 83312027
Centisome position: 62.89
GC content: 60.8
Gene sequence:
>801_bases GTGAAGGGACGCGTCGGCATTCTGATCGTCAGCCTCTGCCTGTGGTTTGCCCCTGGCGTCGCCCTGGCCGCGTCGCCCGA TTGCTGGCGGCCGTTCACGTTGGCCCTGCACGACCATGGTCTGCTTTATTCGGCGGAGACCGATTCCGGCATCGACAAGG ACATTGCCGAGGAGCTTGGCCGCCGCAGCGGATGCAAACTGGTGGTCAGCCTGATGTCGCGGGCCAGGATCTGGCAGTTG ATCGAATCCGGCGCGCTGGATTTCAGCCTTTCAGGCATCGCCAATGCCGAACGGAACAGATTCGCCGCCTTCGCCTGGTA CATCAGCAATAAATATTACCTTCTGGTCCGCAAGGATGCCGGCATCCGCAAGCTGGCTGATTTCGAGCGCGACGAGCACC TGCGGCTCGGCGTCATCCGCAGTTTCCGCTACAGCGAGACCGCCAACCAATTGGTCGACAGCCTGCAGGCCGCCGGGCGC GTCAGTCAATCGGCCGGTCTGGGTCCGCTTTACCGGGTGTTGAGCGCCAACGCCATTCAGGCCATGATCATCGAGCCCTT CGATTACCCCGCTCTGGATGAGAAGAGGATTCGGGACTTCACCGACATTATCGAATTCAACGATCCGGCGGTTCCCCACG GCTTGATCATGTCGAAGGCGTCATTGTCGCCGGAAGAGCAGGACAAGTGGCGCGATCTGGTCAGGGAGATGCGCAGGGAT GGAACCGTGCGCCGGATCTTCCAGAAATATTTCCCCCCAGACCTGGCTGCGGCCATGACTGAATTCGACGATTCGCCGTG A
Upstream 100 bases:
>100_bases GTCTTGATGACGTCTTCCCGTTCACCCCGGGGTTGGGCTATCGTGCCCTCCGGCCTGACGGTCCATGCCGAATGTGCCGT GACACGAGGGAGGGGGCTTG
Downstream 100 bases:
>100_bases CCAGCCCACGCCTGAAGCTGTTGCCCTGGCTGGTGCTGCTCGCCTCGTTAGGTGTGACGTGGCTCGCCTGGGATCACGAG CGCGATACCGCCCAGGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKGRVGILIVSLCLWFAPGVALAASPDCWRPFTLALHDHGLLYSAETDSGIDKDIAEELGRRSGCKLVVSLMSRARIWQL IESGALDFSLSGIANAERNRFAAFAWYISNKYYLLVRKDAGIRKLADFERDEHLRLGVIRSFRYSETANQLVDSLQAAGR VSQSAGLGPLYRVLSANAIQAMIIEPFDYPALDEKRIRDFTDIIEFNDPAVPHGLIMSKASLSPEEQDKWRDLVREMRRD GTVRRIFQKYFPPDLAAAMTEFDDSP
Sequences:
>Translated_266_residues MKGRVGILIVSLCLWFAPGVALAASPDCWRPFTLALHDHGLLYSAETDSGIDKDIAEELGRRSGCKLVVSLMSRARIWQL IESGALDFSLSGIANAERNRFAAFAWYISNKYYLLVRKDAGIRKLADFERDEHLRLGVIRSFRYSETANQLVDSLQAAGR VSQSAGLGPLYRVLSANAIQAMIIEPFDYPALDEKRIRDFTDIIEFNDPAVPHGLIMSKASLSPEEQDKWRDLVREMRRD GTVRRIFQKYFPPDLAAAMTEFDDSP >Mature_266_residues MKGRVGILIVSLCLWFAPGVALAASPDCWRPFTLALHDHGLLYSAETDSGIDKDIAEELGRRSGCKLVVSLMSRARIWQL IESGALDFSLSGIANAERNRFAAFAWYISNKYYLLVRKDAGIRKLADFERDEHLRLGVIRSFRYSETANQLVDSLQAAGR VSQSAGLGPLYRVLSANAIQAMIIEPFDYPALDEKRIRDFTDIIEFNDPAVPHGLIMSKASLSPEEQDKWRDLVREMRRD GTVRRIFQKYFPPDLAAAMTEFDDSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29961; Mature: 29961
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGRVGILIVSLCLWFAPGVALAASPDCWRPFTLALHDHGLLYSAETDSGIDKDIAEELG CCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCEEEECCCCCCCCHHHHHHHC RRSGCKLVVSLMSRARIWQLIESGALDFSLSGIANAERNRFAAFAWYISNKYYLLVRKDA CCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCCHHEEEEEEECCEEEEEEECCC GIRKLADFERDEHLRLGVIRSFRYSETANQLVDSLQAAGRVSQSAGLGPLYRVLSANAIQ CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCHHE AMIIEPFDYPALDEKRIRDFTDIIEFNDPAVPHGLIMSKASLSPEEQDKWRDLVREMRRD EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHC GTVRRIFQKYFPPDLAAAMTEFDDSP CHHHHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure MKGRVGILIVSLCLWFAPGVALAASPDCWRPFTLALHDHGLLYSAETDSGIDKDIAEELG CCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCEEEECCCCCCCCHHHHHHHC RRSGCKLVVSLMSRARIWQLIESGALDFSLSGIANAERNRFAAFAWYISNKYYLLVRKDA CCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCCHHEEEEEEECCEEEEEEECCC GIRKLADFERDEHLRLGVIRSFRYSETANQLVDSLQAAGRVSQSAGLGPLYRVLSANAIQ CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCHHE AMIIEPFDYPALDEKRIRDFTDIIEFNDPAVPHGLIMSKASLSPEEQDKWRDLVREMRRD EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHC GTVRRIFQKYFPPDLAAAMTEFDDSP CHHHHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA