| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311995
Identifier: 83311995
GI number: 83311995
Start: 3094105
End: 3094443
Strand: Reverse
Name: 83311995
Synonym: amb2896
Alternate gene names: NA
Gene position: 3094443-3094105 (Counterclockwise)
Preceding gene: 83311998
Following gene: 83311994
Centisome position: 62.3
GC content: 62.24
Gene sequence:
>339_bases ATGGCAGGCATGAGCGCGGTGAATGATGTCTGTGATTATTACCAAAGGTTAATCGCGGTGAAATGCTGCGGTAACCTCGC GCCTGCCATGATCCGCCTCATAGTGTTGGAGAAGCGGTTGGCGGCAAGTTTGCGCTCCTCGCCAAAAGCCTCTCAAACTC CGGCGGAAACCGAACTCCCCGCCGACCGGCGAGCCACTTTCCCCCCCGAGTGGCTCCGTCGAACGACCGGCAGCGTCCCC CCGTTGCCGGACACCGGAAAAAGGCCCCCGCGTCGTCCCCCCTGGCGCGGGGGCTTTTCCGTGAGGGACGTTGCTTGTAT GGTCCCCGGCACAACTTAG
Upstream 100 bases:
>100_bases CGGGAAGGCTTCGCTCGGAACACCTTCCCCTGGGATTCGATGTAGGGTGGATTCGTTCGGCGTCAACGGAGCTTTGTCGT GTTAAAACAAAGCATTGCTC
Downstream 100 bases:
>100_bases GTTATCGGACACGATGCGCATCCTTCTGATCGAGGACGACAGTGAAGCGGCGGCCTACATGGCCAAGGGCCTGCGCGAGG CCGGGCATGTGGTCGATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAGMSAVNDVCDYYQRLIAVKCCGNLAPAMIRLIVLEKRLAASLRSSPKASQTPAETELPADRRATFPPEWLRRTTGSVP PLPDTGKRPPRRPPWRGGFSVRDVACMVPGTT
Sequences:
>Translated_112_residues MAGMSAVNDVCDYYQRLIAVKCCGNLAPAMIRLIVLEKRLAASLRSSPKASQTPAETELPADRRATFPPEWLRRTTGSVP PLPDTGKRPPRRPPWRGGFSVRDVACMVPGTT >Mature_111_residues AGMSAVNDVCDYYQRLIAVKCCGNLAPAMIRLIVLEKRLAASLRSSPKASQTPAETELPADRRATFPPEWLRRTTGSVPP LPDTGKRPPRRPPWRGGFSVRDVACMVPGTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12249; Mature: 12118
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGMSAVNDVCDYYQRLIAVKCCGNLAPAMIRLIVLEKRLAASLRSSPKASQTPAETELP CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ADRRATFPPEWLRRTTGSVPPLPDTGKRPPRRPPWRGGFSVRDVACMVPGTT CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCC >Mature Secondary Structure AGMSAVNDVCDYYQRLIAVKCCGNLAPAMIRLIVLEKRLAASLRSSPKASQTPAETELP CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ADRRATFPPEWLRRTTGSVPPLPDTGKRPPRRPPWRGGFSVRDVACMVPGTT CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA