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The map label for this gene is ydeM [H]

Identifier: 83311985

GI number: 83311985

Start: 3084986

End: 3085453

Strand: Reverse

Name: ydeM [H]

Synonym: amb2886

Alternate gene names: 83311985

Gene position: 3085453-3084986 (Counterclockwise)

Preceding gene: 83311986

Following gene: 83311984

Centisome position: 62.12

GC content: 67.31

Gene sequence:

>468_bases
ATGACCCATTATCTCGAGGACCTGGTGCCCGGGCGGGTGTTCTCGTCGCCCTCCTACGAAGTGACGGTGGACGACATCAA
GGGCTTTGCTGCCGCCTGGGACCCCCAGCATTTCCATCTGGACGAGGTCAGCGCCAAGGACTCGTTCTTCGCCGGACTGG
CGGCCTCGGGCTGGCACACGGCGGCGGCCACCATGCGCCTGATGGTGACCAGCGAGCTGAACCTGCCGCTGGGAATCATC
GGCAGCGGGCTGGAGAGTCTGAAATGGCACCGGCCGGTCCGCCCCGGCGATGTGCTGAGCCTGCGCATCGAAGTGGTGGA
AACCCGCGAGATGCGCTCCAAGCCAGGCCTGGGGCTGGCCCGTTTCCGGGTCGAGACCCTGGATGCCGAGAGGCTGGCGG
TGCAGACCCTGGAGACACAGCTGGTGGTGCCGAGCCGGGCGGGGGCTGGACAAGCGGCGGCAAAGTGA

Upstream 100 bases:

>100_bases
CCTTCGTGCTGTCGGGGCTGGCCTGTCTGGTGGCGGCGGCCATGTCGCTGATGATCGGGCGCAAGCTGGGGCCGCAGCCG
GTGGCGGAAGGAGCGGCGGC

Downstream 100 bases:

>100_bases
TCAGCCTTTCCCGATCGTCAATTCGGGGGTGATCATGCGGCGTTTTGTCATGGCCTTGTGTCTGGTGCTGGTTCCCGAGG
CCGCGCTGGCCTGGCCCAGC

Product: Acyl dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MTHYLEDLVPGRVFSSPSYEVTVDDIKGFAAAWDPQHFHLDEVSAKDSFFAGLAASGWHTAAATMRLMVTSELNLPLGII
GSGLESLKWHRPVRPGDVLSLRIEVVETREMRSKPGLGLARFRVETLDAERLAVQTLETQLVVPSRAGAGQAAAK

Sequences:

>Translated_155_residues
MTHYLEDLVPGRVFSSPSYEVTVDDIKGFAAAWDPQHFHLDEVSAKDSFFAGLAASGWHTAAATMRLMVTSELNLPLGII
GSGLESLKWHRPVRPGDVLSLRIEVVETREMRSKPGLGLARFRVETLDAERLAVQTLETQLVVPSRAGAGQAAAK
>Mature_154_residues
THYLEDLVPGRVFSSPSYEVTVDDIKGFAAAWDPQHFHLDEVSAKDSFFAGLAASGWHTAAATMRLMVTSELNLPLGIIG
SGLESLKWHRPVRPGDVLSLRIEVVETREMRSKPGLGLARFRVETLDAERLAVQTLETQLVVPSRAGAGQAAAK

Specific function: Phenylacetic acid aerobic catabolism. [C]

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 16896; Mature: 16765

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHYLEDLVPGRVFSSPSYEVTVDDIKGFAAAWDPQHFHLDEVSAKDSFFAGLAASGWHT
CCCCHHHHCCCCEECCCCCEEEHHCCCCEEECCCCCCEECCCCCCCCHHHHHHCCCCCHH
AAATMRLMVTSELNLPLGIIGSGLESLKWHRPVRPGDVLSLRIEVVETREMRSKPGLGLA
HHHEEEEEEEECCCCCHHHHCCCHHHHHHCCCCCCCCEEEEEEEEEEHHHHHCCCCCCEE
RFRVETLDAERLAVQTLETQLVVPSRAGAGQAAAK
EEEEECCCHHHHHHHHHHHEEEECCCCCCCCCCCC
>Mature Secondary Structure 
THYLEDLVPGRVFSSPSYEVTVDDIKGFAAAWDPQHFHLDEVSAKDSFFAGLAASGWHT
CCCHHHHCCCCEECCCCCEEEHHCCCCEEECCCCCCEECCCCCCCCHHHHHHCCCCCHH
AAATMRLMVTSELNLPLGIIGSGLESLKWHRPVRPGDVLSLRIEVVETREMRSKPGLGLA
HHHEEEEEEEECCCCCHHHHCCCHHHHHHCCCCCCCCEEEEEEEEEEHHHHHCCCCCCEE
RFRVETLDAERLAVQTLETQLVVPSRAGAGQAAAK
EEEEECCCHHHHHHHHHHHEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]