| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yfgE [C]
Identifier: 83311942
GI number: 83311942
Start: 3044449
End: 3045144
Strand: Reverse
Name: yfgE [C]
Synonym: amb2843
Alternate gene names: 83311942
Gene position: 3045144-3044449 (Counterclockwise)
Preceding gene: 83311943
Following gene: 83311941
Centisome position: 61.31
GC content: 71.7
Gene sequence:
>696_bases ATGAGCGAGGCCCAGCTTCCCCTGGCGTTCGGGCATGTCCCCTCGCTGGCCGCTGACGATTTCCTGGTGGCGCCCTGCAA CGCCGAGGCCCATGCCTGGGTGGGCGCGCCGGGCCGCTGGCCCGGCCCGGCCAGCGTCCTGTGCGGCCCGGCCCAAAGCG GCAAGACCCATCTGGCCCATCTGTTCGCCCGTGACGGCGGCGGCAGGCTGGTTTCCGCCGCCGAGGTGACGGAAGGGTCC TCGCGTCCGCTGCTGGAATCGGTGCCGGTGCTGGTGGTCGAGGATTGCGACCGCGGCCCGCTCGACGAGGTCGGGCTGTT CCATCTCATCAACCAGGGCCGCGAGCTTGGCCGCCTGCTGCTGCTGACCGCCCGCCTGCCGCCCGCCACCTGGGCGGTCA GGCTGCCCGATCTGCGCTCGCGGCTGCTGGCCATGCCGGTGGCGGCCATCGGGGCGCCCGACGACGCGCTGCTGGCCGCC CTGCTGGTCAAGCTGTTCGATGATCGCCAGTTGCGGATCGGCGAGGATGTGGTTCACTTCCTGATCGGCCGCATGGAGCG CAGCTTCGCCGCCTGCGCCAGAATGGTGGAACGCCTGGACAATGCCGCCCTGGCCAGCCGCCGCGCCGTCACCGTGCCGC TGGCCCGGCGCATTCTGGAGGGTGAGGACCATGGATCTGGGACTGAAGGGCCGTAG
Upstream 100 bases:
>100_bases TGCCGGCCGCCTCGGTGATCGGCGTTCTGACCCGCTTCGCTCTGCAGAACTACATGAAGAGTTCGCTGTACGACGGCGTC GAGGACGATTACAGCAAGTC
Downstream 100 bases:
>100_bases CGCCATCGTTTGCGGCGCCTCGCGCGGTCTGGGCCGTGCCTGTGCCGAATCTTTGGCCCGCGAGGGCGTCAATCTGGTGA TGGCGGCCCGCCGCCCCGAT
Product: DNA replication initiation ATPase
Products: NA
Alternate protein names: DNAA-Related Protein; Regulatory Inactivation Of DNAA Hda Protein; Chromosomal Replication Initiator; DNA Replication Initiation ATPase; Chromosomal Replication Initiator Protein DNAA; DNAA-Like Protein; ATPase Involved In DNA Replication Initiation; Chromosomal Replication Initiator DNAa; ATPase; DNA Replication Initiation ATPase Protein; DNAA-Like Protein Hda
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSEAQLPLAFGHVPSLAADDFLVAPCNAEAHAWVGAPGRWPGPASVLCGPAQSGKTHLAHLFARDGGGRLVSAAEVTEGS SRPLLESVPVLVVEDCDRGPLDEVGLFHLINQGRELGRLLLLTARLPPATWAVRLPDLRSRLLAMPVAAIGAPDDALLAA LLVKLFDDRQLRIGEDVVHFLIGRMERSFAACARMVERLDNAALASRRAVTVPLARRILEGEDHGSGTEGP
Sequences:
>Translated_231_residues MSEAQLPLAFGHVPSLAADDFLVAPCNAEAHAWVGAPGRWPGPASVLCGPAQSGKTHLAHLFARDGGGRLVSAAEVTEGS SRPLLESVPVLVVEDCDRGPLDEVGLFHLINQGRELGRLLLLTARLPPATWAVRLPDLRSRLLAMPVAAIGAPDDALLAA LLVKLFDDRQLRIGEDVVHFLIGRMERSFAACARMVERLDNAALASRRAVTVPLARRILEGEDHGSGTEGP >Mature_230_residues SEAQLPLAFGHVPSLAADDFLVAPCNAEAHAWVGAPGRWPGPASVLCGPAQSGKTHLAHLFARDGGGRLVSAAEVTEGSS RPLLESVPVLVVEDCDRGPLDEVGLFHLINQGRELGRLLLLTARLPPATWAVRLPDLRSRLLAMPVAAIGAPDDALLAAL LVKLFDDRQLRIGEDVVHFLIGRMERSFAACARMVERLDNAALASRRAVTVPLARRILEGEDHGSGTEGP
Specific function: Unknown
COG id: COG0593
COG function: function code L; ATPase involved in DNA replication initiation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24571; Mature: 24439
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAQLPLAFGHVPSLAADDFLVAPCNAEAHAWVGAPGRWPGPASVLCGPAQSGKTHLAH CCCCCCCEEECCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCEEECCCCCCHHHHHH LFARDGGGRLVSAAEVTEGSSRPLLESVPVLVVEDCDRGPLDEVGLFHLINQGRELGRLL HHHCCCCCCEEEHHHHCCCCCCCHHHHCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHH LLTARLPPATWAVRLPDLRSRLLAMPVAAIGAPDDALLAALLVKLFDDRQLRIGEDVVHF EEECCCCCCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH LIGRMERSFAACARMVERLDNAALASRRAVTVPLARRILEGEDHGSGTEGP HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SEAQLPLAFGHVPSLAADDFLVAPCNAEAHAWVGAPGRWPGPASVLCGPAQSGKTHLAH CCCCCCEEECCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCEEECCCCCCHHHHHH LFARDGGGRLVSAAEVTEGSSRPLLESVPVLVVEDCDRGPLDEVGLFHLINQGRELGRLL HHHCCCCCCEEEHHHHCCCCCCCHHHHCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHH LLTARLPPATWAVRLPDLRSRLLAMPVAAIGAPDDALLAALLVKLFDDRQLRIGEDVVHF EEECCCCCCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH LIGRMERSFAACARMVERLDNAALASRRAVTVPLARRILEGEDHGSGTEGP HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA