BacMap

Definition	Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession	NC_007626
Length	4,967,148

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The map label for this gene is fabG [H]

Identifier: 83311941

GI number: 83311941

Start: 3043695

End: 3044474

Strand: Reverse

Name: fabG [H]

Synonym: amb2842

Alternate gene names: 83311941

Gene position: 3044474-3043695 (Counterclockwise)

Preceding gene: 83311942

Following gene: 83311939

Centisome position: 61.29

GC content: 67.82

Gene sequence:

>780_bases
ATGGATCTGGGACTGAAGGGCCGTAGCGCCATCGTTTGCGGCGCCTCGCGCGGTCTGGGCCGTGCCTGTGCCGAATCTTT
GGCCCGCGAGGGCGTCAATCTGGTGATGGCGGCCCGCCGCCCCGATGTGCTTGAACTGGCGGCCAAGGAGATTCGGGCCA
GGACCGGCGCCGCCATCAAGACCGTGCCGGTGGACGTGACCACTCCGGAAGGGCGCAAGGTGCTGCTGACCATCCTGCCC
GATCCCGATATCCTGGTGACCAATGCCGGCGGCCCGCCGCCCGGCGATTTCCGCGATTGGGACCGCGCCGCCTGGATCAA
GGCGCTGGACGCCAACATGCTGACGCCCATCGAGTTGATCAAGGCAACCGTGGACGCCATGATCGAGCGGAAATTCGGGC
GCATCGTCAACATTACCTCGGCGGCGGTCAAGGCCCCCATCGACGTGCTGGGACTGTCCAACGGGGCTCGGGCGGGGCTG
ACCGGCTTCGTGGCGGGACTGGCCCGTCAGGTGGCGCGCCACAACGTCACCATCAACAATCTGCTGCCCGGTCCCTTCGA
CACCGATCGCCTGCGCGCCACCATGGAGGGGCAGGCCAAGGCCCAGGGCGTCACCCTCGACGAGTCCATGGCGCGGCGCC
GCGACGCCAATCCCGCTGGACGCTTCGGTGACCCGGCCGAATTCGGCGATGCCTGCGCCTATTTCTGCTCGGCCCAGGCG
GGCTACATCACCGGCCAGAATCTGGTGATCGACGGCGGGGCCTTTCCGGGGACGCTTTGA

Upstream 100 bases:

>100_bases
GCCTGCGCCAGAATGGTGGAACGCCTGGACAATGCCGCCCTGGCCAGCCGCCGCGCCGTCACCGTGCCGCTGGCCCGGCG
CATTCTGGAGGGTGAGGACC

Downstream 100 bases:

>100_bases
CGGGCTGCGGTTCGGGGGCTTTCGCCCCCGATCCCCCAACCGGGAAGCACAGCTTCCCGGACCCTTCAGCTATTTTAATT
TATTGGAATAAAAAGAACTG

Product: dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MDLGLKGRSAIVCGASRGLGRACAESLAREGVNLVMAARRPDVLELAAKEIRARTGAAIKTVPVDVTTPEGRKVLLTILP
DPDILVTNAGGPPPGDFRDWDRAAWIKALDANMLTPIELIKATVDAMIERKFGRIVNITSAAVKAPIDVLGLSNGARAGL
TGFVAGLARQVARHNVTINNLLPGPFDTDRLRATMEGQAKAQGVTLDESMARRRDANPAGRFGDPAEFGDACAYFCSAQA
GYITGQNLVIDGGAFPGTL

Sequences:

>Translated_259_residues
MDLGLKGRSAIVCGASRGLGRACAESLAREGVNLVMAARRPDVLELAAKEIRARTGAAIKTVPVDVTTPEGRKVLLTILP
DPDILVTNAGGPPPGDFRDWDRAAWIKALDANMLTPIELIKATVDAMIERKFGRIVNITSAAVKAPIDVLGLSNGARAGL
TGFVAGLARQVARHNVTINNLLPGPFDTDRLRATMEGQAKAQGVTLDESMARRRDANPAGRFGDPAEFGDACAYFCSAQA
GYITGQNLVIDGGAFPGTL
>Mature_259_residues
MDLGLKGRSAIVCGASRGLGRACAESLAREGVNLVMAARRPDVLELAAKEIRARTGAAIKTVPVDVTTPEGRKVLLTILP
DPDILVTNAGGPPPGDFRDWDRAAWIKALDANMLTPIELIKATVDAMIERKFGRIVNITSAAVKAPIDVLGLSNGARAGL
TGFVAGLARQVARHNVTINNLLPGPFDTDRLRATMEGQAKAQGVTLDESMARRRDANPAGRFGDPAEFGDACAYFCSAQA
GYITGQNLVIDGGAFPGTL

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=254, Percent_Identity=28.3464566929134, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=25.5905511811024, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=28.9256198347107, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=27.2373540856031, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI226371731, Length=184, Percent_Identity=29.8913043478261, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI66933014, Length=230, Percent_Identity=25.2173913043478, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI15277342, Length=269, Percent_Identity=27.5092936802974, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI7706318, Length=200, Percent_Identity=29, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=28.4210526315789, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI7705855, Length=184, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI4503301, Length=235, Percent_Identity=24.6808510638298, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI7705925, Length=256, Percent_Identity=24.21875, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI20149619, Length=194, Percent_Identity=27.319587628866, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=24.4186046511628, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI10190704, Length=259, Percent_Identity=26.2548262548263, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787335, Length=259, Percent_Identity=33.2046332046332, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI87082160, Length=256, Percent_Identity=30.078125, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1790717, Length=255, Percent_Identity=24.3137254901961, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87082100, Length=264, Percent_Identity=30.3030303030303, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787905, Length=256, Percent_Identity=26.5625, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1788459, Length=255, Percent_Identity=27.4509803921569, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789208, Length=261, Percent_Identity=25.2873563218391, Blast_Score=69, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=29.9212598425197, Blast_Score=103, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=30.3846153846154, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562910, Length=258, Percent_Identity=29.8449612403101, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=28.4090909090909, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=29.1187739463602, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=270, Percent_Identity=26.6666666666667, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=28.5171102661597, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=28.1954887218045, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=27.1698113207547, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=258, Percent_Identity=26.7441860465116, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=25.5813953488372, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=259, Percent_Identity=25.8687258687259, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=272, Percent_Identity=25.7352941176471, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI25147288, Length=254, Percent_Identity=25.5905511811024, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17561272, Length=259, Percent_Identity=28.957528957529, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=270, Percent_Identity=25.9259259259259, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=252, Percent_Identity=24.6031746031746, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17536651, Length=262, Percent_Identity=25.9541984732824, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=26.4, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=27.2030651340996, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=267, Percent_Identity=25.8426966292135, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI193204405, Length=277, Percent_Identity=26.3537906137184, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=25.8964143426295, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=260, Percent_Identity=27.6923076923077, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=261, Percent_Identity=25.6704980842912, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=26.3157894736842, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=24.1509433962264, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=257, Percent_Identity=26.4591439688716, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=196, Percent_Identity=26.0204081632653, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=27.1653543307087, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=31.8897637795276, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24639444, Length=268, Percent_Identity=26.865671641791, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24584748, Length=195, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI161076933, Length=195, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI28571526, Length=255, Percent_Identity=29.0196078431373, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584744, Length=187, Percent_Identity=29.9465240641711, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28574402, Length=187, Percent_Identity=29.9465240641711, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24640442, Length=199, Percent_Identity=27.6381909547739, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21358495, Length=215, Percent_Identity=26.046511627907, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=25.8823529411765, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24580925, Length=232, Percent_Identity=26.7241379310345, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27217; Mature: 27217

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLGLKGRSAIVCGASRGLGRACAESLAREGVNLVMAARRPDVLELAAKEIRARTGAAIK
CCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCEEE
TVPVDVTTPEGRKVLLTILPDPDILVTNAGGPPPGDFRDWDRAAWIKALDANMLTPIELI
EEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH
KATVDAMIERKFGRIVNITSAAVKAPIDVLGLSNGARAGLTGFVAGLARQVARHNVTINN
HHHHHHHHHHHHCCEEEEHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEC
LLPGPFDTDRLRATMEGQAKAQGVTLDESMARRRDANPAGRFGDPAEFGDACAYFCSAQA
CCCCCCCHHHHHHHHCCCHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
GYITGQNLVIDGGAFPGTL
CEEECCEEEEECCCCCCCC
>Mature Secondary Structure
MDLGLKGRSAIVCGASRGLGRACAESLAREGVNLVMAARRPDVLELAAKEIRARTGAAIK
CCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCEEE
TVPVDVTTPEGRKVLLTILPDPDILVTNAGGPPPGDFRDWDRAAWIKALDANMLTPIELI
EEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH
KATVDAMIERKFGRIVNITSAAVKAPIDVLGLSNGARAGLTGFVAGLARQVARHNVTINN
HHHHHHHHHHHHCCEEEEHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEC
LLPGPFDTDRLRATMEGQAKAQGVTLDESMARRRDANPAGRFGDPAEFGDACAYFCSAQA
CCCCCCCHHHHHHHHCCCHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
GYITGQNLVIDGGAFPGTL
CEEECCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]