Click here to switch to the map view.

The map label for this gene is prkA [H]

Identifier: 83311794

GI number: 83311794

Start: 2887544

End: 2888425

Strand: Reverse

Name: prkA [H]

Synonym: amb2695

Alternate gene names: 83311794

Gene position: 2888425-2887544 (Counterclockwise)

Preceding gene: 83311795

Following gene: 83311792

Centisome position: 58.15

GC content: 61.56

Gene sequence:

>882_bases
ATGTCGAGGAAACATCCGGTCATCGCCGTCACCGGCTCATCGGGGGCGGGGACCAGCACGGTCAAGGACTCCTTCGAACA
CATGTTTCGCCGCGAAGGCATCAAGCCGGCGGTAATCGAGGGCGACAGCTTCCATCGCTACAATCGCGTCGACATGAAAA
AACGCATGAAGGAGGCGGGCGGCACCTTCAGCCATTTCGGCCCCGAGGCCAACCTGTTCGCCCAATTGGAGGAATTGTTC
TCCTCCTATGGCGAGACCGGACGGGGACGGCGGCGCTTTTACGTCCATAACGACGAGGAGGCGGAGCGCTTCGCCCATCT
CGGCGTGGGCTCGGGCGAGTTCACCCCGTGGGAGGATCTGGCCGAGGATACCGATTGCCTGTTCTACGAGGGGCTGCACG
GCTGCGTCGCCACCCGCGACAACAATGTCGCCCAGCATGTGGACCTCAAGATCGGCGTGGTGCCGGTGATCAATCTGGAA
TGGATTCAGAAGATTCACCGCGATACCAACCAGCGCGGCTATTCCGAGGAAGCGGTGATGGAGACCATCCTGCGCCGCAT
GCATGACTACGTGCATTACGTGGTGCCGCAGTTCAAGCTGACCGACATCAACTTCCAGCGGGTGCCCATCGTCGACACCT
CGGACCCCATCATCGCCCGCGACATTCCCACCGCCGATGAAAGCCTGGTGGTGATCCGTTTCCGCAAGCCCGACCGCTTT
CGCGTCGACTTCCCGTTCCTGCTGCAGATGCTGAAGGATTCGTGGATGAGCCGGCGCAACACCATCGTGGTGCCCGGTGG
CAAGATGGGACTGGCCATGGAACTGATCCTGACCCCCATCCTGCGTCGCATCATGGAGGATCGCCGGGCGGTTCTCGGCT
GA

Upstream 100 bases:

>100_bases
CGAACTCAGGGGGGCGTTTGAATCCTTTGCGTCCGACGCCGATCGGCTGTATCCCGGCTGGCGCGATCGCCTGCGCATCG
CGGCTTGAGGGGAACGCCAC

Downstream 100 bases:

>100_bases
CGGTTTCCGACGGTACTGGGCCGGCGGGGTCGCTCTCCCCCCTGCCGGCCTATTTTTCCCGGGCGGCCATCCAGGCATCG
ACCAGCAGGCGGGCGATGGA

Product: phosphoribulokinase

Products: NA

Alternate protein names: PRK I; PRKase 1; Phosphopentokinase 1 [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSRKHPVIAVTGSSGAGTSTVKDSFEHMFRREGIKPAVIEGDSFHRYNRVDMKKRMKEAGGTFSHFGPEANLFAQLEELF
SSYGETGRGRRRFYVHNDEEAERFAHLGVGSGEFTPWEDLAEDTDCLFYEGLHGCVATRDNNVAQHVDLKIGVVPVINLE
WIQKIHRDTNQRGYSEEAVMETILRRMHDYVHYVVPQFKLTDINFQRVPIVDTSDPIIARDIPTADESLVVIRFRKPDRF
RVDFPFLLQMLKDSWMSRRNTIVVPGGKMGLAMELILTPILRRIMEDRRAVLG

Sequences:

>Translated_293_residues
MSRKHPVIAVTGSSGAGTSTVKDSFEHMFRREGIKPAVIEGDSFHRYNRVDMKKRMKEAGGTFSHFGPEANLFAQLEELF
SSYGETGRGRRRFYVHNDEEAERFAHLGVGSGEFTPWEDLAEDTDCLFYEGLHGCVATRDNNVAQHVDLKIGVVPVINLE
WIQKIHRDTNQRGYSEEAVMETILRRMHDYVHYVVPQFKLTDINFQRVPIVDTSDPIIARDIPTADESLVVIRFRKPDRF
RVDFPFLLQMLKDSWMSRRNTIVVPGGKMGLAMELILTPILRRIMEDRRAVLG
>Mature_292_residues
SRKHPVIAVTGSSGAGTSTVKDSFEHMFRREGIKPAVIEGDSFHRYNRVDMKKRMKEAGGTFSHFGPEANLFAQLEELFS
SYGETGRGRRRFYVHNDEEAERFAHLGVGSGEFTPWEDLAEDTDCLFYEGLHGCVATRDNNVAQHVDLKIGVVPVINLEW
IQKIHRDTNQRGYSEEAVMETILRRMHDYVHYVVPQFKLTDINFQRVPIVDTSDPIIARDIPTADESLVVIRFRKPDRFR
VDFPFLLQMLKDSWMSRRNTIVVPGGKMGLAMELILTPILRRIMEDRRAVLG

Specific function: Unknown

COG id: COG3954

COG function: function code C; Phosphoribulokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoribulokinase family [H]

Homologues:

Organism=Escherichia coli, GI2367214, Length=292, Percent_Identity=55.1369863013699, Blast_Score=333, Evalue=7e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006082
- InterPro:   IPR006083 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.19 [H]

Molecular weight: Translated: 33613; Mature: 33482

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00567 PHOSPHORIBULOKINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKHPVIAVTGSSGAGTSTVKDSFEHMFRREGIKPAVIEGDSFHRYNRVDMKKRMKEAG
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHC
GTFSHFGPEANLFAQLEELFSSYGETGRGRRRFYVHNDEEAERFAHLGVGSGEFTPWEDL
CCCHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHH
AEDTDCLFYEGLHGCVATRDNNVAQHVDLKIGVVPVINLEWIQKIHRDTNQRGYSEEAVM
HCCCCHHHHHCCCHHEEECCCCCHHEEEEEEEEEEEECHHHHHHHHHHHCCCCCCHHHHH
ETILRRMHDYVHYVVPQFKLTDINFQRVPIVDTSDPIIARDIPTADESLVVIRFRKPDRF
HHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCEEECCCCCCCCCEEEEEECCCCCE
RVDFPFLLQMLKDSWMSRRNTIVVPGGKMGLAMELILTPILRRIMEDRRAVLG
EECHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRKHPVIAVTGSSGAGTSTVKDSFEHMFRREGIKPAVIEGDSFHRYNRVDMKKRMKEAG
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHC
GTFSHFGPEANLFAQLEELFSSYGETGRGRRRFYVHNDEEAERFAHLGVGSGEFTPWEDL
CCCHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHH
AEDTDCLFYEGLHGCVATRDNNVAQHVDLKIGVVPVINLEWIQKIHRDTNQRGYSEEAVM
HCCCCHHHHHCCCHHEEECCCCCHHEEEEEEEEEEEECHHHHHHHHHHHCCCCCCHHHHH
ETILRRMHDYVHYVVPQFKLTDINFQRVPIVDTSDPIIARDIPTADESLVVIRFRKPDRF
HHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCEEECCCCCCCCCEEEEEECCCCCE
RVDFPFLLQMLKDSWMSRRNTIVVPGGKMGLAMELILTPILRRIMEDRRAVLG
EECHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1907281; 3038847; 9548738 [H]