| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311554
Identifier: 83311554
GI number: 83311554
Start: 2631453
End: 2632667
Strand: Reverse
Name: 83311554
Synonym: amb2455
Alternate gene names: NA
Gene position: 2632667-2631453 (Counterclockwise)
Preceding gene: 83311555
Following gene: 83311553
Centisome position: 53.0
GC content: 63.05
Gene sequence:
>1215_bases ATGATCAGGAACGCAAGGATTCCGGCTTTGGCCGGCGCCATGGCCCTTACGCTCGCCGCCATGCCGGCCCTGGCCGAGCA GACGGTCAAGATTGGGATTCTCTCTGACATGTCCGGACCTTATTCGGACATGGGCGGCCCCGGCTCGGTGGCGGCGGCGC AATTGGCCATCGACGACTGTCAGGCCAAGGAATGCAAGGGCATGAAGGTCGAGCTGCTGTCCATCGACCACCAGAACAAG CCCGACATCGGCGTCCAGAAGGCTCGGGAATGGGCGGATGTCAACAAGGTTAACGCCATCGCCGACCTGACCAATTCGGC CGTGGCGCTGGGGGTGCAGAAGCTGACCCTCGATCACGACTTCATCGCCATGTATTCCGGCCCGGCCACCACCAAGCTGA CCAACGAGGATTGCTCGGCCACCGGCTTTCACTGGATGTTCGACACCTATGCCCTGGCGGCAGGCTCGGCCCAGGCCATC ACCAAGATGGGCGGCAAAAGCTGGTATTTCCTGACCGTGGACTACGCCTTCGGCCATTCGCTGGAGGCCGATTCCATGGC CATGGTCAACCAGTTGGGCGGCAAGGTGGTGGGAAGCGTCCGTCATCCGCTCAATTCCTCGGATATGTCGTCCTTCCTGC TGCAGGCGCAAAGCTCCAAGGCTCAGGTGATCGCCCTGGCCAACGGCGCGGCCGACACCATCAACGCCATCAAGACCGCC CGCGAGTTCGGAATCGTCCAGGGTGGCCAGCAGGTCGTGCCGCTGCTGATCTTCCTGACCGACATCCGCAGCCTCGGTCT GGACATCGCCCAGGGACTGACCTTCACCGAAGGCTTCTACTGGGACCAGGACGATCAGGCCCGCGCTTTCGCCGCCCGCT TCCAAAAGGCCTTCAAGGACCGCAAGCCCACCATGGTGCAGGCCGGCACCTATTCCAGCGTGCTGCATTACCTGCGCGCC GTGGCGGCGGCCAAGACCACCGAGTCCAAGGCGGTGGCGGCCAAGATGCGCGAGTTGCCCATTTCCGACGCGGTGATGCG CAACGCCGCCATTCGTCCCGACGGGCGAGTGGTCCACGACATGCTACTGGTCAAGGTGAAGACCCCGGCCCAATCCAAGG GGGATTGGGATTTCTATAACATCCAGGCCACCATTCCCGCCGCCGAGGCGTTCAAGCCCCTGGCAAGCTCGGCCTGTCCC ATGGTCAAGAAGTAG
Upstream 100 bases:
>100_bases AACGAACATATATTCGTTTCTTTGCCACCCCCTGCTGTGTTTTCATGAAGGCAACGAGGGGCGAAGCCCCCGCCGGTTTC ACAGATGGGGAAACGCTCTC
Downstream 100 bases:
>100_bases TCAAGGCGGGGTGGAAGGCGGTCTTCGGGCCGTCTTCCGCTTCACGCCACCCGTGACTTTCCAAGGCCGCCATGGCATGT AGGTCCCATGTTCCTGCTGT
Product: ABC-type branched-chain amino acid transport systems, periplasmic component
Products: NA
Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MIRNARIPALAGAMALTLAAMPALAEQTVKIGILSDMSGPYSDMGGPGSVAAAQLAIDDCQAKECKGMKVELLSIDHQNK PDIGVQKAREWADVNKVNAIADLTNSAVALGVQKLTLDHDFIAMYSGPATTKLTNEDCSATGFHWMFDTYALAAGSAQAI TKMGGKSWYFLTVDYAFGHSLEADSMAMVNQLGGKVVGSVRHPLNSSDMSSFLLQAQSSKAQVIALANGAADTINAIKTA REFGIVQGGQQVVPLLIFLTDIRSLGLDIAQGLTFTEGFYWDQDDQARAFAARFQKAFKDRKPTMVQAGTYSSVLHYLRA VAAAKTTESKAVAAKMRELPISDAVMRNAAIRPDGRVVHDMLLVKVKTPAQSKGDWDFYNIQATIPAAEAFKPLASSACP MVKK
Sequences:
>Translated_404_residues MIRNARIPALAGAMALTLAAMPALAEQTVKIGILSDMSGPYSDMGGPGSVAAAQLAIDDCQAKECKGMKVELLSIDHQNK PDIGVQKAREWADVNKVNAIADLTNSAVALGVQKLTLDHDFIAMYSGPATTKLTNEDCSATGFHWMFDTYALAAGSAQAI TKMGGKSWYFLTVDYAFGHSLEADSMAMVNQLGGKVVGSVRHPLNSSDMSSFLLQAQSSKAQVIALANGAADTINAIKTA REFGIVQGGQQVVPLLIFLTDIRSLGLDIAQGLTFTEGFYWDQDDQARAFAARFQKAFKDRKPTMVQAGTYSSVLHYLRA VAAAKTTESKAVAAKMRELPISDAVMRNAAIRPDGRVVHDMLLVKVKTPAQSKGDWDFYNIQATIPAAEAFKPLASSACP MVKK >Mature_404_residues MIRNARIPALAGAMALTLAAMPALAEQTVKIGILSDMSGPYSDMGGPGSVAAAQLAIDDCQAKECKGMKVELLSIDHQNK PDIGVQKAREWADVNKVNAIADLTNSAVALGVQKLTLDHDFIAMYSGPATTKLTNEDCSATGFHWMFDTYALAAGSAQAI TKMGGKSWYFLTVDYAFGHSLEADSMAMVNQLGGKVVGSVRHPLNSSDMSSFLLQAQSSKAQVIALANGAADTINAIKTA REFGIVQGGQQVVPLLIFLTDIRSLGLDIAQGLTFTEGFYWDQDDQARAFAARFQKAFKDRKPTMVQAGTYSSVLHYLRA VAAAKTTESKAVAAKMRELPISDAVMRNAAIRPDGRVVHDMLLVKVKTPAQSKGDWDFYNIQATIPAAEAFKPLASSACP MVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43230; Mature: 43230
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRNARIPALAGAMALTLAAMPALAEQTVKIGILSDMSGPYSDMGGPGSVAAAQLAIDDC CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHC QAKECKGMKVELLSIDHQNKPDIGVQKAREWADVNKVNAIADLTNSAVALGVQKLTLDHD CHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCC FIAMYSGPATTKLTNEDCSATGFHWMFDTYALAAGSAQAITKMGGKSWYFLTVDYAFGHS EEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCEEEEEEEEECCCCC LEADSMAMVNQLGGKVVGSVRHPLNSSDMSSFLLQAQSSKAQVIALANGAADTINAIKTA CCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH REFGIVQGGQQVVPLLIFLTDIRSLGLDIAQGLTFTEGFYWDQDDQARAFAARFQKAFKD HHHHHHCCCHHHHHHHHHHHHHHHHCHHHHCCCEECCCEEECCCCHHHHHHHHHHHHHHC RKPTMVQAGTYSSVLHYLRAVAAAKTTESKAVAAKMRELPISDAVMRNAAIRPDGRVVHD CCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEE MLLVKVKTPAQSKGDWDFYNIQATIPAAEAFKPLASSACPMVKK EEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIRNARIPALAGAMALTLAAMPALAEQTVKIGILSDMSGPYSDMGGPGSVAAAQLAIDDC CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHC QAKECKGMKVELLSIDHQNKPDIGVQKAREWADVNKVNAIADLTNSAVALGVQKLTLDHD CHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCC FIAMYSGPATTKLTNEDCSATGFHWMFDTYALAAGSAQAITKMGGKSWYFLTVDYAFGHS EEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCEEEEEEEEECCCCC LEADSMAMVNQLGGKVVGSVRHPLNSSDMSSFLLQAQSSKAQVIALANGAADTINAIKTA CCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH REFGIVQGGQQVVPLLIFLTDIRSLGLDIAQGLTFTEGFYWDQDDQARAFAARFQKAFKD HHHHHHCCCHHHHHHHHHHHHHHHHCHHHHCCCEECCCEEECCCCHHHHHHHHHHHHHHC RKPTMVQAGTYSSVLHYLRAVAAAKTTESKAVAAKMRELPISDAVMRNAAIRPDGRVVHD CCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEE MLLVKVKTPAQSKGDWDFYNIQATIPAAEAFKPLASSACPMVKK EEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA