| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is ycbC [C]
Identifier: 83311553
GI number: 83311553
Start: 2630565
End: 2631365
Strand: Reverse
Name: ycbC [C]
Synonym: amb2454
Alternate gene names: 83311553
Gene position: 2631365-2630565 (Counterclockwise)
Preceding gene: 83311554
Following gene: 83311552
Centisome position: 52.98
GC content: 62.17
Gene sequence:
>801_bases ATGTTCCTGCTGTCCAAACTGCTTGGCTTCGTCACCGATCCGGCCATGATTTTCATGCTGCTGATCCTTTTGGGTTGGCT GCTGGTTCTGTCGCGCCGGTGGCTGTCCTTGGGCCGCAAGATTCTCAGCATCACGTTGCTGACCCTTGTTTTCACGTCAG TTTTTCCGGTGGAAAAGTGGGCTTTGGCCTGGCTGGAGGATCGGTTCCAAACCCCTGATCCGCTGCCGGACAAGGTCGAT GGCATCATCATCCTGGGCGGGGCCATATCCCCTGAACAGAGCGCCGCCCGGGGACAGGTTTCCGTGGGCAGCGCCGTCAC CCGCATGACGGAAATGATCCCGCTGGCCCGGCGCTATCCCGAGGCCCGGGTGGTGTTCACGGGCGGCTCGGGCAATGCCT TCGATCAGGAGCATCGGGAGGCCGATTACGCCGAGATGTTCTATCGCGACATCGGATTCGAGACCGGCCGCATGGTCTTC GAGCGGGATTCCCGCAATACCCGCGAGAACGCCACTCTTTCCAAGGAGCTTATGCAGCCCAAGCCAGGCGAAACCTGGCT GCTGATCACTTCGGCCTGGCACATGCCGCGTGCCGTGGGCTGCTTCCGCGCCGTGGGCTGGCCGGTCGTTCCCATTCCCG TCGACTACCAGACATCGGGGATCAGCCGGCCCTGGTGGTCCGAATTGCGGTTCAGCCCCCAGAAGGGGATATCCGGCCTG GGACCGCTGATCCACGAAGGCCTGGGGCTGATCATCTACCGCCTGATGGGGTGGACCGATACGCTGCTGCCACAGCCTTA A
Upstream 100 bases:
>100_bases GGTCAAGAAGTAGTCAAGGCGGGGTGGAAGGCGGTCTTCGGGCCGTCTTCCGCTTCACGCCACCCGTGACTTTCCAAGGC CGCCATGGCATGTAGGTCCC
Downstream 100 bases:
>100_bases CATTGCGCTGGGCCGCTTAAATGTGGCACAACACCCGGATGCTTACCAGATTTGGGGTTTGGCGCATGGCTTGGGCGACG AAATCTTGGATGATGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MFLLSKLLGFVTDPAMIFMLLILLGWLLVLSRRWLSLGRKILSITLLTLVFTSVFPVEKWALAWLEDRFQTPDPLPDKVD GIIILGGAISPEQSAARGQVSVGSAVTRMTEMIPLARRYPEARVVFTGGSGNAFDQEHREADYAEMFYRDIGFETGRMVF ERDSRNTRENATLSKELMQPKPGETWLLITSAWHMPRAVGCFRAVGWPVVPIPVDYQTSGISRPWWSELRFSPQKGISGL GPLIHEGLGLIIYRLMGWTDTLLPQP
Sequences:
>Translated_266_residues MFLLSKLLGFVTDPAMIFMLLILLGWLLVLSRRWLSLGRKILSITLLTLVFTSVFPVEKWALAWLEDRFQTPDPLPDKVD GIIILGGAISPEQSAARGQVSVGSAVTRMTEMIPLARRYPEARVVFTGGSGNAFDQEHREADYAEMFYRDIGFETGRMVF ERDSRNTRENATLSKELMQPKPGETWLLITSAWHMPRAVGCFRAVGWPVVPIPVDYQTSGISRPWWSELRFSPQKGISGL GPLIHEGLGLIIYRLMGWTDTLLPQP >Mature_266_residues MFLLSKLLGFVTDPAMIFMLLILLGWLLVLSRRWLSLGRKILSITLLTLVFTSVFPVEKWALAWLEDRFQTPDPLPDKVD GIIILGGAISPEQSAARGQVSVGSAVTRMTEMIPLARRYPEARVVFTGGSGNAFDQEHREADYAEMFYRDIGFETGRMVF ERDSRNTRENATLSKELMQPKPGETWLLITSAWHMPRAVGCFRAVGWPVVPIPVDYQTSGISRPWWSELRFSPQKGISGL GPLIHEGLGLIIYRLMGWTDTLLPQP
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29963; Mature: 29963
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLLSKLLGFVTDPAMIFMLLILLGWLLVLSRRWLSLGRKILSITLLTLVFTSVFPVEKW CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ALAWLEDRFQTPDPLPDKVDGIIILGGAISPEQSAARGQVSVGSAVTRMTEMIPLARRYP HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCC EARVVFTGGSGNAFDQEHREADYAEMFYRDIGFETGRMVFERDSRNTRENATLSKELMQP CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCC KPGETWLLITSAWHMPRAVGCFRAVGWPVVPIPVDYQTSGISRPWWSELRFSPQKGISGL CCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCCCHHHCCCCC GPLIHEGLGLIIYRLMGWTDTLLPQP HHHHHHHHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure MFLLSKLLGFVTDPAMIFMLLILLGWLLVLSRRWLSLGRKILSITLLTLVFTSVFPVEKW CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ALAWLEDRFQTPDPLPDKVDGIIILGGAISPEQSAARGQVSVGSAVTRMTEMIPLARRYP HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCC EARVVFTGGSGNAFDQEHREADYAEMFYRDIGFETGRMVFERDSRNTRENATLSKELMQP CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCC KPGETWLLITSAWHMPRAVGCFRAVGWPVVPIPVDYQTSGISRPWWSELRFSPQKGISGL CCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCCCHHHCCCCC GPLIHEGLGLIIYRLMGWTDTLLPQP HHHHHHHHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA