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The map label for this gene is rpmJ

Identifier: 83311393

GI number: 83311393

Start: 2499996

End: 2500121

Strand: Reverse

Name: rpmJ

Synonym: amb2294

Alternate gene names: 83311393

Gene position: 2500121-2499996 (Counterclockwise)

Preceding gene: 83311396

Following gene: 83311391

Centisome position: 50.33

GC content: 57.94

Gene sequence:

>126_bases
ATGAAGATTCGTAACTCGCTGAAGTCGGCCAAGCTGCGCGACAAGAATTGCCGCATCGTTCGCCGCAAGGGCCGGGTCTA
CGTCATCAACAAGACGAACCCCCGCTTCAAGGCTCGCCAGGGCTAA

Upstream 100 bases:

>100_bases
CTGTTGACAGCCCCCGCCGCTTTCCGTATTTTCCCGGCCTCGCGCTTGCGAACCCAAGTGACGTCGTTTCGGCGACAATT
ACGCTTTAGGAAGTCGGACC

Downstream 100 bases:

>100_bases
GGCCCGGCCGCCGATCTGCCCTTACAGGCTTAAGATCGAAGCAAGCCGCGCTCCTCACGGAGCGCGGTTTTCTTTTTCTC
ACATTGTCACACCGCCGCGA

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MKIRNSLKSAKLRDKNCRIVRRKGRVYVINKTNPRFKARQG

Sequences:

>Translated_41_residues
MKIRNSLKSAKLRDKNCRIVRRKGRVYVINKTNPRFKARQG
>Mature_41_residues
MKIRNSLKSAKLRDKNCRIVRRKGRVYVINKTNPRFKARQG

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL36_MAGSA (Q2W4X7)

Other databases:

- EMBL:   AP007255
- RefSeq:   YP_421657.1
- ProteinModelPortal:   Q2W4X7
- SMR:   Q2W4X7
- STRING:   Q2W4X7
- GeneID:   3802607
- GenomeReviews:   AP007255_GR
- KEGG:   mag:amb2294
- NMPDR:   fig|342108.5.peg.2018
- eggNOG:   COG0257
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- BioCyc:   MMAG342108:AMB2294-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4901; Mature: 4901

Theoretical pI: Translated: 12.53; Mature: 12.53

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRNSLKSAKLRDKNCRIVRRKGRVYVINKTNPRFKARQG
CCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCEECCCC
>Mature Secondary Structure
MKIRNSLKSAKLRDKNCRIVRRKGRVYVINKTNPRFKARQG
CCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA