Click here to switch to the map view.

The map label for this gene is ybeQ [C]

Identifier: 83311339

GI number: 83311339

Start: 2442488

End: 2444158

Strand: Reverse

Name: ybeQ [C]

Synonym: amb2240

Alternate gene names: 83311339

Gene position: 2444158-2442488 (Counterclockwise)

Preceding gene: 83311340

Following gene: 83311332

Centisome position: 49.21

GC content: 68.52

Gene sequence:

>1671_bases
ATGACCCAGCGCCCCCGGATGGCCCGACCGCTCGCCCCGTTCGCCCTCGCCGCCTTTCTGGCCCTGGGGGCGGTCCCGGC
CCTGGCCGGCTATGACGAGGGCCTGACGGCCTATCAGAAGCGGGACTGGACCTCCGCCATCCGGGAATTCAGGCCCCTGG
CCACCCAGGGCAACGCCGCGGCCCAGGCCCGGCTTGGTCACATGCTGTTCGAAGGCCTGGGCGGCACCCGGGACGATGTC
GAGGCGCTGAAGCTGCTCAACGCCGCGGCGGCCAGCGGCGATTCCCTGGCCCAGTACTGGCTGGGCAGCGCCTATTTCAA
CGGCCGCGCCGTTCCCAAGGACATCTCCCAGGCCCTGGTCTGGTTCGGGCGCTCCGCCGACAAGGGCCAGCCGGAAGCCC
TGCATGCCATGGGCGAGATTCATTTCAACGGCCTGGGCATCAACAAGGACGAAGGGCGCGGCATCGAATATTTCAAGCGG
GGCGCCGAAAAGGACTGGCCGCCCTCCCTCGATCGCCTCGCCCAATATTCCTGGGACGGCCGGGCCATGCCCACCGACAA
GGTCAAGGCCCTGGAATACGCCCGCCCGGCGGCCGAGGCCGGACGCCCCGTCGCCCAGTTCATCGTCGGCGTGGCCTATC
TGCTGGGCCAGGGCGGCGTGGAAAAGGATGCGGCCAAGGCCGCCCCCTGGTTCCGCAAGGCCGCCGACCAGGGACACCCC
CAGTCGCAGCACAATCTCGGCGTCATGTACCTCAACGGCAGCGGCGTCCCGAAATCCCAGGCTGAGGGCTATTTCTGGAT
GGCCCTGGGGGCCGAACGGGCGCCCGCCAATCTGAAGGCCAATTACGAGAAGGAGCGCGATGCCGCCGGCACGCGCCTGT
CGCCGGCCGAGCTTGAGGCCCTTCGCGGCCGGGTCGCCCTGTGGCGCCCCAATGCCGCGCCGGGACAGCCCTCGGCCCAG
GTGGTCTCGCCCGCGTCCCGCGCCCCCATGCCGCCGGGACAGCAATCGGCCACCACTCCGCCCCCGGCCACCAGCGGCAA
GATCTCGTCCGGATCGGGCTTCGTGGTCTCGGCCGACGGCGTAGTGATGACCAATGCCCATGTGGTGGAGCAGTGCCGCA
GCATCACCATCAAGCCCCAGGACGCCCCCGCCCAGGTGGTGTCGTTGAAGGCCAAGGACAGCGCCAACGACATGGCCCTG
CTCAAGACCTCGCTACGCCTGCCGGAGGTCGCCCGCTTCCGCCAGGACCGGCCGCTGCGGTCGGGCGACGAAGTGGTGGT
GATCGGCTTCCCCCTGTCCTCGCTGCTGTCGCGCGAACCCAATGTCACCGCCGGCGTGGTCAGCGCCCTCAACGGCATGC
GCGGCGACCCGCGCCATTACCAGATCACCGCCCCGGTGCAGAAGGGAAATTCCGGCGGCCCGCTCATCGACATGAGCGGC
AATATCGTCGGCATCGTGACGTCCAAGCTGAACGCCATGAAGATCGCCGACAAGACCGGCGACCTGCCCCAGAACATCAA
CTTCGCCATCAAGGCCGATCTAGCGCGGAGCTATCTGGACAGCAACGGCGTGTCGTACCAGACCGCCGAGTCCAGCGCCC
AGTTGTCGGTGGCCGACGTGGGCGAGCGCATCAAGCGCGTCACCGTCTTCATCGAATGTCGTATGGAATAG

Upstream 100 bases:

>100_bases
GACGGCATCACCCAGTCGCTGGAAGCCGAGATGGGCGCCGCCGTGGAGGAACTGGGCAAGCTGGCCGGGCGCCTGCGAGC
CGACGCCGCCGAATAATCCC

Downstream 100 bases:

>100_bases
ACCGTAGTCTTTTGGGGCTCTCAAAGGACTTGAGCCCCCTTGATCCCCCTCGGCCTCAGGCCCTCTTGCGCACCCAGGGC
AGAATACGGCCGCGCATCTT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MTQRPRMARPLAPFALAAFLALGAVPALAGYDEGLTAYQKRDWTSAIREFRPLATQGNAAAQARLGHMLFEGLGGTRDDV
EALKLLNAAAASGDSLAQYWLGSAYFNGRAVPKDISQALVWFGRSADKGQPEALHAMGEIHFNGLGINKDEGRGIEYFKR
GAEKDWPPSLDRLAQYSWDGRAMPTDKVKALEYARPAAEAGRPVAQFIVGVAYLLGQGGVEKDAAKAAPWFRKAADQGHP
QSQHNLGVMYLNGSGVPKSQAEGYFWMALGAERAPANLKANYEKERDAAGTRLSPAELEALRGRVALWRPNAAPGQPSAQ
VVSPASRAPMPPGQQSATTPPPATSGKISSGSGFVVSADGVVMTNAHVVEQCRSITIKPQDAPAQVVSLKAKDSANDMAL
LKTSLRLPEVARFRQDRPLRSGDEVVVIGFPLSSLLSREPNVTAGVVSALNGMRGDPRHYQITAPVQKGNSGGPLIDMSG
NIVGIVTSKLNAMKIADKTGDLPQNINFAIKADLARSYLDSNGVSYQTAESSAQLSVADVGERIKRVTVFIECRME

Sequences:

>Translated_556_residues
MTQRPRMARPLAPFALAAFLALGAVPALAGYDEGLTAYQKRDWTSAIREFRPLATQGNAAAQARLGHMLFEGLGGTRDDV
EALKLLNAAAASGDSLAQYWLGSAYFNGRAVPKDISQALVWFGRSADKGQPEALHAMGEIHFNGLGINKDEGRGIEYFKR
GAEKDWPPSLDRLAQYSWDGRAMPTDKVKALEYARPAAEAGRPVAQFIVGVAYLLGQGGVEKDAAKAAPWFRKAADQGHP
QSQHNLGVMYLNGSGVPKSQAEGYFWMALGAERAPANLKANYEKERDAAGTRLSPAELEALRGRVALWRPNAAPGQPSAQ
VVSPASRAPMPPGQQSATTPPPATSGKISSGSGFVVSADGVVMTNAHVVEQCRSITIKPQDAPAQVVSLKAKDSANDMAL
LKTSLRLPEVARFRQDRPLRSGDEVVVIGFPLSSLLSREPNVTAGVVSALNGMRGDPRHYQITAPVQKGNSGGPLIDMSG
NIVGIVTSKLNAMKIADKTGDLPQNINFAIKADLARSYLDSNGVSYQTAESSAQLSVADVGERIKRVTVFIECRME
>Mature_555_residues
TQRPRMARPLAPFALAAFLALGAVPALAGYDEGLTAYQKRDWTSAIREFRPLATQGNAAAQARLGHMLFEGLGGTRDDVE
ALKLLNAAAASGDSLAQYWLGSAYFNGRAVPKDISQALVWFGRSADKGQPEALHAMGEIHFNGLGINKDEGRGIEYFKRG
AEKDWPPSLDRLAQYSWDGRAMPTDKVKALEYARPAAEAGRPVAQFIVGVAYLLGQGGVEKDAAKAAPWFRKAADQGHPQ
SQHNLGVMYLNGSGVPKSQAEGYFWMALGAERAPANLKANYEKERDAAGTRLSPAELEALRGRVALWRPNAAPGQPSAQV
VSPASRAPMPPGQQSATTPPPATSGKISSGSGFVVSADGVVMTNAHVVEQCRSITIKPQDAPAQVVSLKAKDSANDMALL
KTSLRLPEVARFRQDRPLRSGDEVVVIGFPLSSLLSREPNVTAGVVSALNGMRGDPRHYQITAPVQKGNSGGPLIDMSGN
IVGIVTSKLNAMKIADKTGDLPQNINFAIKADLARSYLDSNGVSYQTAESSAQLSVADVGERIKRVTVFIECRME

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S1B family [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=181, Percent_Identity=34.2541436464088, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI24308541, Length=181, Percent_Identity=34.2541436464088, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI151301150, Length=253, Percent_Identity=29.2490118577075, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI22129776, Length=187, Percent_Identity=32.0855614973262, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI7019477, Length=181, Percent_Identity=32.0441988950276, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI19923669, Length=268, Percent_Identity=26.1194029850746, Blast_Score=68, Evalue=3e-11,
Organism=Escherichia coli, GI87081769, Length=227, Percent_Identity=30.3964757709251, Blast_Score=89, Evalue=9e-19,
Organism=Escherichia coli, GI1789629, Length=175, Percent_Identity=32.5714285714286, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786356, Length=184, Percent_Identity=32.0652173913043, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789630, Length=176, Percent_Identity=30.1136363636364, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1786867, Length=107, Percent_Identity=35.5140186915888, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17563256, Length=218, Percent_Identity=26.605504587156, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6319410, Length=248, Percent_Identity=30.241935483871, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355295, Length=279, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24646839, Length=181, Percent_Identity=32.5966850828729, Blast_Score=84, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00089 Trypsin [H]

EC number: NA

Molecular weight: Translated: 59354; Mature: 59223

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRPRMARPLAPFALAAFLALGAVPALAGYDEGLTAYQKRDWTSAIREFRPLATQGNAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH
AQARLGHMLFEGLGGTRDDVEALKLLNAAAASGDSLAQYWLGSAYFNGRAVPKDISQALV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCHHHHHHHHH
WFGRSADKGQPEALHAMGEIHFNGLGINKDEGRGIEYFKRGAEKDWPPSLDRLAQYSWDG
HHCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCC
RAMPTDKVKALEYARPAAEAGRPVAQFIVGVAYLLGQGGVEKDAAKAAPWFRKAADQGHP
CCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCC
QSQHNLGVMYLNGSGVPKSQAEGYFWMALGAERAPANLKANYEKERDAAGTRLSPAELEA
CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHH
LRGRVALWRPNAAPGQPSAQVVSPASRAPMPPGQQSATTPPPATSGKISSGSGFVVSADG
HCCCEEEECCCCCCCCCCHHEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
VVMTNAHVVEQCRSITIKPQDAPAQVVSLKAKDSANDMALLKTSLRLPEVARFRQDRPLR
EEEECHHHHHHHHCEECCCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHCCCCCC
SGDEVVVIGFPLSSLLSREPNVTAGVVSALNGMRGDPRHYQITAPVQKGNSGGPLIDMSG
CCCCEEEEECCHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHCCCCCCCEEEECC
NIVGIVTSKLNAMKIADKTGDLPQNINFAIKADLARSYLDSNGVSYQTAESSAQLSVADV
CEEEEEECCCCCEEECCCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEECCCCCCEEHHHH
GERIKRVTVFIECRME
HHHHEEEEEEEEEECC
>Mature Secondary Structure 
TQRPRMARPLAPFALAAFLALGAVPALAGYDEGLTAYQKRDWTSAIREFRPLATQGNAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH
AQARLGHMLFEGLGGTRDDVEALKLLNAAAASGDSLAQYWLGSAYFNGRAVPKDISQALV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCHHHHHHHHH
WFGRSADKGQPEALHAMGEIHFNGLGINKDEGRGIEYFKRGAEKDWPPSLDRLAQYSWDG
HHCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCC
RAMPTDKVKALEYARPAAEAGRPVAQFIVGVAYLLGQGGVEKDAAKAAPWFRKAADQGHP
CCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCC
QSQHNLGVMYLNGSGVPKSQAEGYFWMALGAERAPANLKANYEKERDAAGTRLSPAELEA
CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHH
LRGRVALWRPNAAPGQPSAQVVSPASRAPMPPGQQSATTPPPATSGKISSGSGFVVSADG
HCCCEEEECCCCCCCCCCHHEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
VVMTNAHVVEQCRSITIKPQDAPAQVVSLKAKDSANDMALLKTSLRLPEVARFRQDRPLR
EEEECHHHHHHHHCEECCCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHCCCCCC
SGDEVVVIGFPLSSLLSREPNVTAGVVSALNGMRGDPRHYQITAPVQKGNSGGPLIDMSG
CCCCEEEEECCHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHCCCCCCCEEEECC
NIVGIVTSKLNAMKIADKTGDLPQNINFAIKADLARSYLDSNGVSYQTAESSAQLSVADV
CEEEEEECCCCCEEECCCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEECCCCCCEEHHHH
GERIKRVTVFIECRME
HHHHEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]