The gene/protein map for NC_012563 is currently unavailable.
Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83311257

Identifier: 83311257

GI number: 83311257

Start: 2341193

End: 2341942

Strand: Reverse

Name: 83311257

Synonym: amb2158

Alternate gene names: NA

Gene position: 2341942-2341193 (Counterclockwise)

Preceding gene: 83311261

Following gene: 83311256

Centisome position: 47.15

GC content: 65.87

Gene sequence:

>750_bases
ATGACCGTCGCCACCACCGTCACACTCGACGACAAATACGTCCAAGATCAAGGCCGGCTCTACCTGACCGGCATCCAGGC
GCTGGTCAAGCTGCCCATGCTGCAGCATCTGCGCGATCAGGCCGCCGGCCTCGACACCGGCGGCTTCATCTCCGGCTATC
GTGGCTCGCCCTTAGGGGGGCTGGACAAGGAATTATGGCGCGCCGGCCCCCACCTGGAAAGGCACGCCATCCGGTTCCAA
CCCGGACTCAACGAGGATCTGGCCGCCACCGCCGTGTGGGGCACCCAGCAGATCGGCCTGTTCCGAGGGCCGACCCACGA
TGGCGTCTTCGCCCTGTGGTACGGCAAGGGGCCAGGGCTGGACCGCAGCGTCGACGTCTTCAAGCACGCCAATTCCGCCG
GCACCGCGCCCCATGGCGGTGTCCTGGTCCTGGCCGGCGACGACCACGGCGCCAAGTCCTCGACCCTGGCGCATCAGAGC
GAGCAGGTCTTCATGGCGGCGCAGATGCCGGTGCTCAATCCGGCCGGCGTGCAGGAGGTCTTGGATTTCGGCCTGTTCGG
CTGGGCGCTGTCGCGCTTCTCTGGCCTGTGGGTGGGCATGAAGGCCATTTCCGAGACGGTGGAAAGCTCGGCCTCGGTCA
ATGTGGACCCTGGCATCAGGTCTTCGTCACGCCTCAGGATTTCAAAATGCCGCCGGGCGGGCTCAACATCCGCTGGCCGG
ACAAGTTCCTGGAACAGGAATTGCGGCTGA

Upstream 100 bases:

>100_bases
GGGGGACGCATTGCATTCCTTGCTATTTTGGGGGGCTCCCTTTCCACCGGAAGAATGCATCATTACGTACAAGACGTAGG
CGCTGTACGGAAAGACCCCC

Downstream 100 bases:

>100_bases
TGGCGCACCGTATCCCGGCGGCCCTGGCCTTCGCCAAGGCCAACCGCATCGACCGCACCATCATCGAATCGCCCCATCCC
CGCCTCGGCATCGTCACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: 2-Oxoacid Ferredoxin Oxidoreductase; Pyruvate Ferredoxin/Flavodoxin Oxidoreductase; Oxidoreductase; Pyruvate/Ketoisovalerate Oxidoreductase; Pyruvate Ferredoxin/Flavodoxin Oxidoreductase Family; Oxyreductase Protein; Indolepyruvate Ferredoxin Oxidoreductase Alpha Subunit; Indolepyruvate Ferredoxin Oxidoreductase Subunit Alpha/Beta; Indolepyruvate Oxidoreductase; Pyruvate/Ketoisovalerate Oxidoreductase Catalytic Subunit; Ferredoxin Oxidoreductase Oxidoreductase Protein; Pyruvate Ferredoxin

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTVATTVTLDDKYVQDQGRLYLTGIQALVKLPMLQHLRDQAAGLDTGGFISGYRGSPLGGLDKELWRAGPHLERHAIRFQ
PGLNEDLAATAVWGTQQIGLFRGPTHDGVFALWYGKGPGLDRSVDVFKHANSAGTAPHGGVLVLAGDDHGAKSSTLAHQS
EQVFMAAQMPVLNPAGVQEVLDFGLFGWALSRFSGLWVGMKAISETVESSASVNVDPGIRSSSRLRISKCRRAGSTSAGR
TSSWNRNCG

Sequences:

>Translated_249_residues
MTVATTVTLDDKYVQDQGRLYLTGIQALVKLPMLQHLRDQAAGLDTGGFISGYRGSPLGGLDKELWRAGPHLERHAIRFQ
PGLNEDLAATAVWGTQQIGLFRGPTHDGVFALWYGKGPGLDRSVDVFKHANSAGTAPHGGVLVLAGDDHGAKSSTLAHQS
EQVFMAAQMPVLNPAGVQEVLDFGLFGWALSRFSGLWVGMKAISETVESSASVNVDPGIRSSSRLRISKCRRAGSTSAGR
TSSWNRNCG
>Mature_248_residues
TVATTVTLDDKYVQDQGRLYLTGIQALVKLPMLQHLRDQAAGLDTGGFISGYRGSPLGGLDKELWRAGPHLERHAIRFQP
GLNEDLAATAVWGTQQIGLFRGPTHDGVFALWYGKGPGLDRSVDVFKHANSAGTAPHGGVLVLAGDDHGAKSSTLAHQSE
QVFMAAQMPVLNPAGVQEVLDFGLFGWALSRFSGLWVGMKAISETVESSASVNVDPGIRSSSRLRISKCRRAGSTSAGRT
SSWNRNCG

Specific function: Unknown

COG id: COG4231

COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26599; Mature: 26468

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVATTVTLDDKYVQDQGRLYLTGIQALVKLPMLQHLRDQAAGLDTGGFISGYRGSPLGG
CCEEEEEEECCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
LDKELWRAGPHLERHAIRFQPGLNEDLAATAVWGTQQIGLFRGPTHDGVFALWYGKGPGL
CCHHHHHCCCCHHHHEEEECCCCCCCHHHEEECCCCCCCEEECCCCCCEEEEEECCCCCC
DRSVDVFKHANSAGTAPHGGVLVLAGDDHGAKSSTLAHQSEQVFMAAQMPVLNPAGVQEV
CCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCHHEEEEECCCCCCCCCHHHH
LDFGLFGWALSRFSGLWVGMKAISETVESSASVNVDPGIRSSSRLRISKCRRAGSTSAGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCC
TSSWNRNCG
CCCCCCCCC
>Mature Secondary Structure 
TVATTVTLDDKYVQDQGRLYLTGIQALVKLPMLQHLRDQAAGLDTGGFISGYRGSPLGG
CEEEEEEECCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
LDKELWRAGPHLERHAIRFQPGLNEDLAATAVWGTQQIGLFRGPTHDGVFALWYGKGPGL
CCHHHHHCCCCHHHHEEEECCCCCCCHHHEEECCCCCCCEEECCCCCCEEEEEECCCCCC
DRSVDVFKHANSAGTAPHGGVLVLAGDDHGAKSSTLAHQSEQVFMAAQMPVLNPAGVQEV
CCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCHHEEEEECCCCCCCCCHHHH
LDFGLFGWALSRFSGLWVGMKAISETVESSASVNVDPGIRSSSRLRISKCRRAGSTSAGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCC
TSSWNRNCG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA