| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311257
Identifier: 83311257
GI number: 83311257
Start: 2341193
End: 2341942
Strand: Reverse
Name: 83311257
Synonym: amb2158
Alternate gene names: NA
Gene position: 2341942-2341193 (Counterclockwise)
Preceding gene: 83311261
Following gene: 83311256
Centisome position: 47.15
GC content: 65.87
Gene sequence:
>750_bases ATGACCGTCGCCACCACCGTCACACTCGACGACAAATACGTCCAAGATCAAGGCCGGCTCTACCTGACCGGCATCCAGGC GCTGGTCAAGCTGCCCATGCTGCAGCATCTGCGCGATCAGGCCGCCGGCCTCGACACCGGCGGCTTCATCTCCGGCTATC GTGGCTCGCCCTTAGGGGGGCTGGACAAGGAATTATGGCGCGCCGGCCCCCACCTGGAAAGGCACGCCATCCGGTTCCAA CCCGGACTCAACGAGGATCTGGCCGCCACCGCCGTGTGGGGCACCCAGCAGATCGGCCTGTTCCGAGGGCCGACCCACGA TGGCGTCTTCGCCCTGTGGTACGGCAAGGGGCCAGGGCTGGACCGCAGCGTCGACGTCTTCAAGCACGCCAATTCCGCCG GCACCGCGCCCCATGGCGGTGTCCTGGTCCTGGCCGGCGACGACCACGGCGCCAAGTCCTCGACCCTGGCGCATCAGAGC GAGCAGGTCTTCATGGCGGCGCAGATGCCGGTGCTCAATCCGGCCGGCGTGCAGGAGGTCTTGGATTTCGGCCTGTTCGG CTGGGCGCTGTCGCGCTTCTCTGGCCTGTGGGTGGGCATGAAGGCCATTTCCGAGACGGTGGAAAGCTCGGCCTCGGTCA ATGTGGACCCTGGCATCAGGTCTTCGTCACGCCTCAGGATTTCAAAATGCCGCCGGGCGGGCTCAACATCCGCTGGCCGG ACAAGTTCCTGGAACAGGAATTGCGGCTGA
Upstream 100 bases:
>100_bases GGGGGACGCATTGCATTCCTTGCTATTTTGGGGGGCTCCCTTTCCACCGGAAGAATGCATCATTACGTACAAGACGTAGG CGCTGTACGGAAAGACCCCC
Downstream 100 bases:
>100_bases TGGCGCACCGTATCCCGGCGGCCCTGGCCTTCGCCAAGGCCAACCGCATCGACCGCACCATCATCGAATCGCCCCATCCC CGCCTCGGCATCGTCACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: 2-Oxoacid Ferredoxin Oxidoreductase; Pyruvate Ferredoxin/Flavodoxin Oxidoreductase; Oxidoreductase; Pyruvate/Ketoisovalerate Oxidoreductase; Pyruvate Ferredoxin/Flavodoxin Oxidoreductase Family; Oxyreductase Protein; Indolepyruvate Ferredoxin Oxidoreductase Alpha Subunit; Indolepyruvate Ferredoxin Oxidoreductase Subunit Alpha/Beta; Indolepyruvate Oxidoreductase; Pyruvate/Ketoisovalerate Oxidoreductase Catalytic Subunit; Ferredoxin Oxidoreductase Oxidoreductase Protein; Pyruvate Ferredoxin
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTVATTVTLDDKYVQDQGRLYLTGIQALVKLPMLQHLRDQAAGLDTGGFISGYRGSPLGGLDKELWRAGPHLERHAIRFQ PGLNEDLAATAVWGTQQIGLFRGPTHDGVFALWYGKGPGLDRSVDVFKHANSAGTAPHGGVLVLAGDDHGAKSSTLAHQS EQVFMAAQMPVLNPAGVQEVLDFGLFGWALSRFSGLWVGMKAISETVESSASVNVDPGIRSSSRLRISKCRRAGSTSAGR TSSWNRNCG
Sequences:
>Translated_249_residues MTVATTVTLDDKYVQDQGRLYLTGIQALVKLPMLQHLRDQAAGLDTGGFISGYRGSPLGGLDKELWRAGPHLERHAIRFQ PGLNEDLAATAVWGTQQIGLFRGPTHDGVFALWYGKGPGLDRSVDVFKHANSAGTAPHGGVLVLAGDDHGAKSSTLAHQS EQVFMAAQMPVLNPAGVQEVLDFGLFGWALSRFSGLWVGMKAISETVESSASVNVDPGIRSSSRLRISKCRRAGSTSAGR TSSWNRNCG >Mature_248_residues TVATTVTLDDKYVQDQGRLYLTGIQALVKLPMLQHLRDQAAGLDTGGFISGYRGSPLGGLDKELWRAGPHLERHAIRFQP GLNEDLAATAVWGTQQIGLFRGPTHDGVFALWYGKGPGLDRSVDVFKHANSAGTAPHGGVLVLAGDDHGAKSSTLAHQSE QVFMAAQMPVLNPAGVQEVLDFGLFGWALSRFSGLWVGMKAISETVESSASVNVDPGIRSSSRLRISKCRRAGSTSAGRT SSWNRNCG
Specific function: Unknown
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26599; Mature: 26468
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVATTVTLDDKYVQDQGRLYLTGIQALVKLPMLQHLRDQAAGLDTGGFISGYRGSPLGG CCEEEEEEECCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC LDKELWRAGPHLERHAIRFQPGLNEDLAATAVWGTQQIGLFRGPTHDGVFALWYGKGPGL CCHHHHHCCCCHHHHEEEECCCCCCCHHHEEECCCCCCCEEECCCCCCEEEEEECCCCCC DRSVDVFKHANSAGTAPHGGVLVLAGDDHGAKSSTLAHQSEQVFMAAQMPVLNPAGVQEV CCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCHHEEEEECCCCCCCCCHHHH LDFGLFGWALSRFSGLWVGMKAISETVESSASVNVDPGIRSSSRLRISKCRRAGSTSAGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCC TSSWNRNCG CCCCCCCCC >Mature Secondary Structure TVATTVTLDDKYVQDQGRLYLTGIQALVKLPMLQHLRDQAAGLDTGGFISGYRGSPLGG CEEEEEEECCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC LDKELWRAGPHLERHAIRFQPGLNEDLAATAVWGTQQIGLFRGPTHDGVFALWYGKGPGL CCHHHHHCCCCHHHHEEEECCCCCCCHHHEEECCCCCCCEEECCCCCCEEEEEECCCCCC DRSVDVFKHANSAGTAPHGGVLVLAGDDHGAKSSTLAHQSEQVFMAAQMPVLNPAGVQEV CCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCHHEEEEECCCCCCCCCHHHH LDFGLFGWALSRFSGLWVGMKAISETVESSASVNVDPGIRSSSRLRISKCRRAGSTSAGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCC TSSWNRNCG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA