| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is braE [H]
Identifier: 83311127
GI number: 83311127
Start: 2205501
End: 2206490
Strand: Reverse
Name: braE [H]
Synonym: amb2028
Alternate gene names: 83311127
Gene position: 2206490-2205501 (Counterclockwise)
Preceding gene: 83311128
Following gene: 83311126
Centisome position: 44.42
GC content: 65.96
Gene sequence:
>990_bases ATGAGCGCGCTGCTGCAAGACCGCCGTGCCGTCCTGCTGCTGGGCCTGCTGGCGATTCTCGCCCTGGCGCCGCTGGCGGC GGGCGACTATGTGCTGTCCATCCTGATCACCGTGCTGCTCCAGGCCTATCTCGGCATGAGCTGGAACGTGATGATGGGCT TTGCCGGCCAGTTCTCGCTGGGCCACGCCCTCTATGTGGGGCTGGGGGCCTATGCCGGCGGCGCCCTGTTCGTCCATTAC GGCACGCCGCCCTGGATCGGTGCCCTGGCCGGCATGGCGGTCTCGGCCGCGGTGGGTGCCGTGGTCGGCACACTCGGCTT CCGCTTCAAGGTGATGGGCGTCTATTTCGCCCTGCTGACCATCGCCTTCGCCGAGTTCACCCGGGTGCTGTTCGACCATT GGGGCTGGGTGGGGGCCTCGTCGGGCCTGTTCCTGCCCCCCGCCCCCAACAACAGCCCGGACAATCTGTGGCTGCTGCGC GGCTCGACCACCATGTTCTACTACGTGGCGCTGGCCATGGCGGCGGGGGCCTTCTGGTTCAGCCGCGCCCTGCTGATGCG CCGCATCGGCTTTTACTGGCAGGCCATCCGCGAGGATCAGGACGCCGCCGACGCGCTGGGCATTGATGTCTTCAAGAACA AGATGATCGCCGTGCTGATCTCGGCCTCCATGACCAGCCTGGGCGGCGTGTTCCTGGCCTTCTTCAACAACAACCTCTAC CCCGAGAGCATTTTTTCCATGCATCGCTCCATCGAGTTGATGCTGGGCACCATCATCGGGGGAATCGGCACCCTGTTCGG GCCGATCCTGGGCGCCGTGGTGTTGACCGCCCTGGGCGAGGGCCTGACCATCCTGGGCGCCCATATCGGCATCGATGGCG TCAAGCAGATCGCCTACGGCATCTGTCTGATGCTTATCCTGGTCCTGAAGCCGGGCGGGCTGTGGCCCTGGCTGCGCAAG GCCTTCCGCCTGGAGGGAGACGGACGATGA
Upstream 100 bases:
>100_bases CGGGCGTGCTGATCGCTCCGTCGCTCAAAAGCATGTTCAGCTTCGGCCTGCTGATCCTGGTCCTGCTGCTGCGGCCGCAA GGCATCCTGGGGAAGAAGCC
Downstream 100 bases:
>100_bases ATACCGCCACTCCCATGCTTTCGGTCGAGAACCTGGGCAAGAGCTTCCGCGGCCTGCGCGCCGTCAACCAGGTGGCCTTC GAGGTGCCGCGCGGCGACAT
Product: ABC-type branched-chain amino acid transport system
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSALLQDRRAVLLLGLLAILALAPLAAGDYVLSILITVLLQAYLGMSWNVMMGFAGQFSLGHALYVGLGAYAGGALFVHY GTPPWIGALAGMAVSAAVGAVVGTLGFRFKVMGVYFALLTIAFAEFTRVLFDHWGWVGASSGLFLPPAPNNSPDNLWLLR GSTTMFYYVALAMAAGAFWFSRALLMRRIGFYWQAIREDQDAADALGIDVFKNKMIAVLISASMTSLGGVFLAFFNNNLY PESIFSMHRSIELMLGTIIGGIGTLFGPILGAVVLTALGEGLTILGAHIGIDGVKQIAYGICLMLILVLKPGGLWPWLRK AFRLEGDGR
Sequences:
>Translated_329_residues MSALLQDRRAVLLLGLLAILALAPLAAGDYVLSILITVLLQAYLGMSWNVMMGFAGQFSLGHALYVGLGAYAGGALFVHY GTPPWIGALAGMAVSAAVGAVVGTLGFRFKVMGVYFALLTIAFAEFTRVLFDHWGWVGASSGLFLPPAPNNSPDNLWLLR GSTTMFYYVALAMAAGAFWFSRALLMRRIGFYWQAIREDQDAADALGIDVFKNKMIAVLISASMTSLGGVFLAFFNNNLY PESIFSMHRSIELMLGTIIGGIGTLFGPILGAVVLTALGEGLTILGAHIGIDGVKQIAYGICLMLILVLKPGGLWPWLRK AFRLEGDGR >Mature_328_residues SALLQDRRAVLLLGLLAILALAPLAAGDYVLSILITVLLQAYLGMSWNVMMGFAGQFSLGHALYVGLGAYAGGALFVHYG TPPWIGALAGMAVSAAVGAVVGTLGFRFKVMGVYFALLTIAFAEFTRVLFDHWGWVGASSGLFLPPAPNNSPDNLWLLRG STTMFYYVALAMAAGAFWFSRALLMRRIGFYWQAIREDQDAADALGIDVFKNKMIAVLISASMTSLGGVFLAFFNNNLYP ESIFSMHRSIELMLGTIIGGIGTLFGPILGAVVLTALGEGLTILGAHIGIDGVKQIAYGICLMLILVLKPGGLWPWLRKA FRLEGDGR
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=322, Percent_Identity=24.5341614906832, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 35223; Mature: 35092
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALLQDRRAVLLLGLLAILALAPLAAGDYVLSILITVLLQAYLGMSWNVMMGFAGQFSL CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHH GHALYVGLGAYAGGALFVHYGTPPWIGALAGMAVSAAVGAVVGTLGFRFKVMGVYFALLT HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAFAEFTRVLFDHWGWVGASSGLFLPPAPNNSPDNLWLLRGSTTMFYYVALAMAAGAFWF HHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH SRALLMRRIGFYWQAIREDQDAADALGIDVFKNKMIAVLISASMTSLGGVFLAFFNNNLY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PESIFSMHRSIELMLGTIIGGIGTLFGPILGAVVLTALGEGLTILGAHIGIDGVKQIAYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCHHHHHHHHHH ICLMLILVLKPGGLWPWLRKAFRLEGDGR HHHHHHHHHCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure SALLQDRRAVLLLGLLAILALAPLAAGDYVLSILITVLLQAYLGMSWNVMMGFAGQFSL CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHH GHALYVGLGAYAGGALFVHYGTPPWIGALAGMAVSAAVGAVVGTLGFRFKVMGVYFALLT HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAFAEFTRVLFDHWGWVGASSGLFLPPAPNNSPDNLWLLRGSTTMFYYVALAMAAGAFWF HHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH SRALLMRRIGFYWQAIREDQDAADALGIDVFKNKMIAVLISASMTSLGGVFLAFFNNNLY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PESIFSMHRSIELMLGTIIGGIGTLFGPILGAVVLTALGEGLTILGAHIGIDGVKQIAYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCHHHHHHHHHH ICLMLILVLKPGGLWPWLRKAFRLEGDGR HHHHHHHHHCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]