| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83310790
Identifier: 83310790
GI number: 83310790
Start: 1836164
End: 1836901
Strand: Reverse
Name: 83310790
Synonym: amb1691
Alternate gene names: NA
Gene position: 1836901-1836164 (Counterclockwise)
Preceding gene: 83310791
Following gene: 83310789
Centisome position: 36.98
GC content: 56.91
Gene sequence:
>738_bases ATGTCAGGATTAAGCACGAAGCAGGCCAGGGCGTTAGCCGCCAAATTCGTGACAATGCAGGAGCAGCAGCGAGCACGGGG ACAACGTCATCGGGACAAGATGGCGCAAGACGGCTATCGCAGATTGGTGATGTGGGTTCCCGGCGATGTTTTCGATGAGG CCAAGGCTGCCGTCAAAGCCATCGCCCAGAATTCACCGGTCCTGCCAATCTACACGGCCACCAAGACCAATAGGTCCTTC TCTTCCACCACTCCACCAATCGCGCCTGCGCATGATGTAGAGGAACTTCGAGCGGCGATCGACCAGATCGTCATCGCCCT CGGGCCAATTCGCGTTGACATTTTGACAACCACCACCGCGCGAAAATTCGGCCTCAACAAGGCAGGACAAGCTTTTAAGA GATCCATTACCCCATTGATTGACCACTATCCGTCCACGAGAGAAGGCGAGCACACCTTCATCTGGCCCATCGGCAGTGAC ATCTCGGCACTTCATGCCTTCAGGGATGCTGCAGGGGAGGACGCCCCACGCAGCGCCGACGAAATTGCCGTCCAAGAGTT GGCGTCACTTGCTTTTGAATTCCTGGCCGAGGGCACTTCCGATGAGGCGGTCATACGCGGCATGGCCACTCGGCTCGGGC TGCAAAAGATTAAGCATGGGACACGTTCAAAATTGGAGAAGGCCCTTCAGATGGCGACTGCCGGGCAGCGCGGCCGCATC ATCGATCCGGAATTATAA
Upstream 100 bases:
>100_bases GAACTTATTTCGACGCTGAACGAGGAAGGCGACTAATTTCAAGTCGCTCGCCACGCCAGGACGATCAATATGCTCAACCA GACTTCTAGCGAGCAGTCCT
Downstream 100 bases:
>100_bases AAGTCCAGACCGGGACATCACTTCTCCTCTTTGATCCGCTCCATCTCAGCCTTGAGCCCCAGATCAATCAGGTAGCGGAT GGCCACCGCATCCTTTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Helicase
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSGLSTKQARALAAKFVTMQEQQRARGQRHRDKMAQDGYRRLVMWVPGDVFDEAKAAVKAIAQNSPVLPIYTATKTNRSF SSTTPPIAPAHDVEELRAAIDQIVIALGPIRVDILTTTTARKFGLNKAGQAFKRSITPLIDHYPSTREGEHTFIWPIGSD ISALHAFRDAAGEDAPRSADEIAVQELASLAFEFLAEGTSDEAVIRGMATRLGLQKIKHGTRSKLEKALQMATAGQRGRI IDPEL
Sequences:
>Translated_245_residues MSGLSTKQARALAAKFVTMQEQQRARGQRHRDKMAQDGYRRLVMWVPGDVFDEAKAAVKAIAQNSPVLPIYTATKTNRSF SSTTPPIAPAHDVEELRAAIDQIVIALGPIRVDILTTTTARKFGLNKAGQAFKRSITPLIDHYPSTREGEHTFIWPIGSD ISALHAFRDAAGEDAPRSADEIAVQELASLAFEFLAEGTSDEAVIRGMATRLGLQKIKHGTRSKLEKALQMATAGQRGRI IDPEL >Mature_244_residues SGLSTKQARALAAKFVTMQEQQRARGQRHRDKMAQDGYRRLVMWVPGDVFDEAKAAVKAIAQNSPVLPIYTATKTNRSFS STTPPIAPAHDVEELRAAIDQIVIALGPIRVDILTTTTARKFGLNKAGQAFKRSITPLIDHYPSTREGEHTFIWPIGSDI SALHAFRDAAGEDAPRSADEIAVQELASLAFEFLAEGTSDEAVIRGMATRLGLQKIKHGTRSKLEKALQMATAGQRGRII DPEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26801; Mature: 26670
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLSTKQARALAAKFVTMQEQQRARGQRHRDKMAQDGYRRLVMWVPGDVFDEAKAAVKA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHH IAQNSPVLPIYTATKTNRSFSSTTPPIAPAHDVEELRAAIDQIVIALGPIRVDILTTTTA HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECHHH RKFGLNKAGQAFKRSITPLIDHYPSTREGEHTFIWPIGSDISALHAFRDAAGEDAPRSAD HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCHH EIAVQELASLAFEFLAEGTSDEAVIRGMATRLGLQKIKHGTRSKLEKALQMATAGQRGRI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCC IDPEL CCCCC >Mature Secondary Structure SGLSTKQARALAAKFVTMQEQQRARGQRHRDKMAQDGYRRLVMWVPGDVFDEAKAAVKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHH IAQNSPVLPIYTATKTNRSFSSTTPPIAPAHDVEELRAAIDQIVIALGPIRVDILTTTTA HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECHHH RKFGLNKAGQAFKRSITPLIDHYPSTREGEHTFIWPIGSDISALHAFRDAAGEDAPRSAD HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCHH EIAVQELASLAFEFLAEGTSDEAVIRGMATRLGLQKIKHGTRSKLEKALQMATAGQRGRI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCC IDPEL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA