| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310787
Identifier: 83310787
GI number: 83310787
Start: 1834591
End: 1835127
Strand: Reverse
Name: 83310787
Synonym: amb1688
Alternate gene names: NA
Gene position: 1835127-1834591 (Counterclockwise)
Preceding gene: 83310788
Following gene: 83310786
Centisome position: 36.95
GC content: 59.4
Gene sequence:
>537_bases ATGAATTCATTCAACACGACCCCGATCACCGTTGCCGCCATCAGCACCGTCCAGGAAATGCTGGCTCTCAATGCGGCAGG CATGTCCTGGCTTTTGGGTACAAGCTCGGCGAAATGGAGTTCAATTCAGCGCAATATTCGCCTCTCACCCGATCGCCTTG CCGATCCATGCCACGCCCTGATTTTGCGCTGGATGTTTCGTCATCCCACGGCGTCCCCCAGTCTTCATGCCCCTGCGGCG GGAGAGTTTTTGGGGAGGCTTCGCAACGCTGTCGGTCATGTAACAGCAAAAGCCTTCGCCTTGTCATTGGGCTGGGATGG CTCAGCAGGCCACCGCTGGCTTCGCGGCGCGCCGATTGGTCCGGCTGGCCGACAGGCTCTATGCCTGATCAACGCCCCCA ACCCGGAAAAATTGGCGGGCAACTGGTCGGAATGGCGGGCTAACGCACGCCAAGAAGCGGCATTGCGCAATATCAACCTC AACAAGGCGCTGGGCTGGACAGCAGCCCGCAATCGTCACGAGGAAGATCCCGAGTGA
Upstream 100 bases:
>100_bases GACAACAGAGGACGGTATGCAGGCATGGGCACAAATCCTTGCGGCACGTCCCACCTCGTTCCCGTCCCTTCCCTCGATGC TGTTTTGATCGGAGGTCACC
Downstream 100 bases:
>100_bases CCGCCCAAACACTCCCCACTATCAACTGACGCTTCGGCATCTGCCAGAGCGTCACCAAAGAATCCTGCGCGACCTTTGGA GGACGTCATGAAAAAGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MNSFNTTPITVAAISTVQEMLALNAAGMSWLLGTSSAKWSSIQRNIRLSPDRLADPCHALILRWMFRHPTASPSLHAPAA GEFLGRLRNAVGHVTAKAFALSLGWDGSAGHRWLRGAPIGPAGRQALCLINAPNPEKLAGNWSEWRANARQEAALRNINL NKALGWTAARNRHEEDPE
Sequences:
>Translated_178_residues MNSFNTTPITVAAISTVQEMLALNAAGMSWLLGTSSAKWSSIQRNIRLSPDRLADPCHALILRWMFRHPTASPSLHAPAA GEFLGRLRNAVGHVTAKAFALSLGWDGSAGHRWLRGAPIGPAGRQALCLINAPNPEKLAGNWSEWRANARQEAALRNINL NKALGWTAARNRHEEDPE >Mature_178_residues MNSFNTTPITVAAISTVQEMLALNAAGMSWLLGTSSAKWSSIQRNIRLSPDRLADPCHALILRWMFRHPTASPSLHAPAA GEFLGRLRNAVGHVTAKAFALSLGWDGSAGHRWLRGAPIGPAGRQALCLINAPNPEKLAGNWSEWRANARQEAALRNINL NKALGWTAARNRHEEDPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19372; Mature: 19372
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSFNTTPITVAAISTVQEMLALNAAGMSWLLGTSSAKWSSIQRNIRLSPDRLADPCHAL CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEECCCCCHHHHHHCCCCCCCHHHCCHHHHH ILRWMFRHPTASPSLHAPAAGEFLGRLRNAVGHVTAKAFALSLGWDGSAGHRWLRGAPIG HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEECCCCCC PAGRQALCLINAPNPEKLAGNWSEWRANARQEAALRNINLNKALGWTAARNRHEEDPE CCCCCEEEEEECCCHHHHCCCHHHHHCCHHHHHHHHCCCCCHHHCHHHHHCCCCCCCC >Mature Secondary Structure MNSFNTTPITVAAISTVQEMLALNAAGMSWLLGTSSAKWSSIQRNIRLSPDRLADPCHAL CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEECCCCCHHHHHHCCCCCCCHHHCCHHHHH ILRWMFRHPTASPSLHAPAAGEFLGRLRNAVGHVTAKAFALSLGWDGSAGHRWLRGAPIG HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEECCCCCC PAGRQALCLINAPNPEKLAGNWSEWRANARQEAALRNINLNKALGWTAARNRHEEDPE CCCCCEEEEEECCCHHHHCCCHHHHHCCHHHHHHHHCCCCCHHHCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA