| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is kgtP [H]
Identifier: 83310753
GI number: 83310753
Start: 1791211
End: 1792629
Strand: Reverse
Name: kgtP [H]
Synonym: amb1654
Alternate gene names: 83310753
Gene position: 1792629-1791211 (Counterclockwise)
Preceding gene: 83310755
Following gene: 83310752
Centisome position: 36.09
GC content: 63.71
Gene sequence:
>1419_bases TTGGCCCGCCCCTTGCGTTTGCCCTCCGCAAAATCGCCCGCGCCCTGCGGGCCAATGTGGGAGGACCGAACGTTGAGTCA CATGGATACGACCATAGCCCCGGCCCCAGTCACTCCGGTGACCGGCAGCCACGACATGGAGAGCAAAGACACCAAGGGCA AGATCCTGATGGTGTTCAAGGGCTCGGTGGGCAATCTGGTGGAATACTACGACTGGTACGTCTACTCCGCCTTCTCGCTG TATTTCTCCAAGTACTTCTTTCCCGGCGACGACCCCACCGTGCAGCTGCTCAACACCTCGGCCATCTTCGCCCTGGGCTT CTTCATGCGTCCGCTGGGCGGCTGGCTGCTGGGCACCCATGCCGACCGCAAGGGGCGCAAGGCGGCCCTGCTGGTCTCGG TCAGCATGATGTGCGCCGGATCGCTGATCATCGCCGTGATGCCCGGCTACAACAGCATCGGCGTGGCGGCGCCCATCGCG CTGATCCTTGCCCGCCTGCTGCAAGGCCTCAGCCTGGGCGGCGAATACGGCTCGGCCGCCACCTATCTGTCGGAAATCGC CACCAAGGACCGGCGCGGCTTTTATTCCAGCTTCCAGTACGTGACCCTGATCATGGGACAATTGCTGGCGCTGGGCGTGC TGATGGCGCTGCAGCGGGTGTTTCTCACCACCGCCGAGCTGGAAGCCTGGGGCTGGCGCATTCCCTTCGTCATCGGCGGG CTGTGCGCCATCGTCGCCATCTACCTGCGGAGCTCCATGGAAGAGACCGAGTCCTTCGAGCACCACAAGGGCGACCGGGT GGGTGAAAGCCGCATCCGCGCCCTGATGCGCCACCCGCGCGAGGTGCTGACGGTGATCGGCCTGACCATGGGCGGCACGG TGGCCTTCTACACCTTCACCACCTACATGCAGAAATATCTGGTCAACACCGCCGGTTTCTCCAAAAGCGACGCCACCATG ATTTCGGCGGCGGCCACCTTCGTCTACATGCTGATGCATCCCCTGGTCGGCCACATTTCCGACAAGGTGGGCCGGCGCGC CGTGCTAATCGCCTTCGGCGTGATGAGCACGCTGTGCACCGTGCCGATCCTCACCGCCCTGGGCCAGACCCATGATTCCG TCACCGCCTTCTTCCTGGTGCTGTCGGGACTGACCATCGTCTCGGGCTATTCCGCCATCAACGCCGTGGTCAAGGCCGAG CTGTTCCCGGTGCAGATCCGCGCCCTGGGCGTCGGCCTGCCCTTCGCCATCGGTGTGTCGCTGTTCGGCGGCACCGCCGA GTACATCGCCCTGTGGTTCAAGAGCATGGGCAACGAGACCTGGTTCTACTGGTACGTGACCGGCTGCTGCCTGTGCGGAT TGCTGCTGTTCGTCGGCATGAAGGACACCAAGAAGACCTCGCTGATCGACCAGGACTGA
Upstream 100 bases:
>100_bases CGCCGATACCCCAGGAGCGCATCGGCGAAGAACCGCCGAACACCCCGCACCCCGATAAATTTTATCGTTGATTTTCAACG AGATACACCAAGGGCGCCAT
Downstream 100 bases:
>100_bases CCCTCCTGTCCCCCGGCGGCTCCAGCCCGGAGCCGCCGGTTTTTTCATTTTCCAAGGACAGCATCATGACCGGACCCTTG TCGCATCTTCGCGTTCTCGA
Product: major facilitator superfamily permease
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MARPLRLPSAKSPAPCGPMWEDRTLSHMDTTIAPAPVTPVTGSHDMESKDTKGKILMVFKGSVGNLVEYYDWYVYSAFSL YFSKYFFPGDDPTVQLLNTSAIFALGFFMRPLGGWLLGTHADRKGRKAALLVSVSMMCAGSLIIAVMPGYNSIGVAAPIA LILARLLQGLSLGGEYGSAATYLSEIATKDRRGFYSSFQYVTLIMGQLLALGVLMALQRVFLTTAELEAWGWRIPFVIGG LCAIVAIYLRSSMEETESFEHHKGDRVGESRIRALMRHPREVLTVIGLTMGGTVAFYTFTTYMQKYLVNTAGFSKSDATM ISAAATFVYMLMHPLVGHISDKVGRRAVLIAFGVMSTLCTVPILTALGQTHDSVTAFFLVLSGLTIVSGYSAINAVVKAE LFPVQIRALGVGLPFAIGVSLFGGTAEYIALWFKSMGNETWFYWYVTGCCLCGLLLFVGMKDTKKTSLIDQD
Sequences:
>Translated_472_residues MARPLRLPSAKSPAPCGPMWEDRTLSHMDTTIAPAPVTPVTGSHDMESKDTKGKILMVFKGSVGNLVEYYDWYVYSAFSL YFSKYFFPGDDPTVQLLNTSAIFALGFFMRPLGGWLLGTHADRKGRKAALLVSVSMMCAGSLIIAVMPGYNSIGVAAPIA LILARLLQGLSLGGEYGSAATYLSEIATKDRRGFYSSFQYVTLIMGQLLALGVLMALQRVFLTTAELEAWGWRIPFVIGG LCAIVAIYLRSSMEETESFEHHKGDRVGESRIRALMRHPREVLTVIGLTMGGTVAFYTFTTYMQKYLVNTAGFSKSDATM ISAAATFVYMLMHPLVGHISDKVGRRAVLIAFGVMSTLCTVPILTALGQTHDSVTAFFLVLSGLTIVSGYSAINAVVKAE LFPVQIRALGVGLPFAIGVSLFGGTAEYIALWFKSMGNETWFYWYVTGCCLCGLLLFVGMKDTKKTSLIDQD >Mature_471_residues ARPLRLPSAKSPAPCGPMWEDRTLSHMDTTIAPAPVTPVTGSHDMESKDTKGKILMVFKGSVGNLVEYYDWYVYSAFSLY FSKYFFPGDDPTVQLLNTSAIFALGFFMRPLGGWLLGTHADRKGRKAALLVSVSMMCAGSLIIAVMPGYNSIGVAAPIAL ILARLLQGLSLGGEYGSAATYLSEIATKDRRGFYSSFQYVTLIMGQLLALGVLMALQRVFLTTAELEAWGWRIPFVIGGL CAIVAIYLRSSMEETESFEHHKGDRVGESRIRALMRHPREVLTVIGLTMGGTVAFYTFTTYMQKYLVNTAGFSKSDATMI SAAATFVYMLMHPLVGHISDKVGRRAVLIAFGVMSTLCTVPILTALGQTHDSVTAFFLVLSGLTIVSGYSAINAVVKAEL FPVQIRALGVGLPFAIGVSLFGGTAEYIALWFKSMGNETWFYWYVTGCCLCGLLLFVGMKDTKKTSLIDQD
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=410, Percent_Identity=52.6829268292683, Blast_Score=409, Evalue=1e-115, Organism=Escherichia coli, GI1790550, Length=422, Percent_Identity=30.8056872037915, Blast_Score=209, Evalue=4e-55, Organism=Escherichia coli, GI1788292, Length=409, Percent_Identity=30.3178484107579, Blast_Score=181, Evalue=1e-46, Organism=Escherichia coli, GI1789941, Length=447, Percent_Identity=29.7539149888143, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI87082231, Length=257, Percent_Identity=27.6264591439689, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI87082404, Length=342, Percent_Identity=22.8070175438596, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 51446; Mature: 51315
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPLRLPSAKSPAPCGPMWEDRTLSHMDTTIAPAPVTPVTGSHDMESKDTKGKILMVFK CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE GSVGNLVEYYDWYVYSAFSLYFSKYFFPGDDPTVQLLNTSAIFALGFFMRPLGGWLLGTH CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHCCCEEECC ADRKGRKAALLVSVSMMCAGSLIIAVMPGYNSIGVAAPIALILARLLQGLSLGGEYGSAA CCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH TYLSEIATKDRRGFYSSFQYVTLIMGQLLALGVLMALQRVFLTTAELEAWGWRIPFVIGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LCAIVAIYLRSSMEETESFEHHKGDRVGESRIRALMRHPREVLTVIGLTMGGTVAFYTFT HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHH TYMQKYLVNTAGFSKSDATMISAAATFVYMLMHPLVGHISDKVGRRAVLIAFGVMSTLCT HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VPILTALGQTHDSVTAFFLVLSGLTIVSGYSAINAVVKAELFPVQIRALGVGLPFAIGVS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHH LFGGTAEYIALWFKSMGNETWFYWYVTGCCLCGLLLFVGMKDTKKTSLIDQD HCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ARPLRLPSAKSPAPCGPMWEDRTLSHMDTTIAPAPVTPVTGSHDMESKDTKGKILMVFK CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE GSVGNLVEYYDWYVYSAFSLYFSKYFFPGDDPTVQLLNTSAIFALGFFMRPLGGWLLGTH CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHCCCEEECC ADRKGRKAALLVSVSMMCAGSLIIAVMPGYNSIGVAAPIALILARLLQGLSLGGEYGSAA CCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH TYLSEIATKDRRGFYSSFQYVTLIMGQLLALGVLMALQRVFLTTAELEAWGWRIPFVIGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LCAIVAIYLRSSMEETESFEHHKGDRVGESRIRALMRHPREVLTVIGLTMGGTVAFYTFT HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHH TYMQKYLVNTAGFSKSDATMISAAATFVYMLMHPLVGHISDKVGRRAVLIAFGVMSTLCT HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VPILTALGQTHDSVTAFFLVLSGLTIVSGYSAINAVVKAELFPVQIRALGVGLPFAIGVS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHH LFGGTAEYIALWFKSMGNETWFYWYVTGCCLCGLLLFVGMKDTKKTSLIDQD HCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]