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The map label for this gene is hoxX [H]

Identifier: 83310734

GI number: 83310734

Start: 1774823

End: 1776475

Strand: Reverse

Name: hoxX [H]

Synonym: amb1635

Alternate gene names: 83310734

Gene position: 1776475-1774823 (Counterclockwise)

Preceding gene: 83310735

Following gene: 83310731

Centisome position: 35.76

GC content: 67.09

Gene sequence:

>1653_bases
ATGCACGTCTTGCTATTGGCCCATTCCTTCAACTCGCTGACCCAGCGCCTGTGGGTGGAACTGTCCGAGTTGGGCCACGA
CGTCACCTGCGAATTCGACGTCAACGACGCCGTCACCCTTCAGGCGGTGGAGTTGGCGCGGCCCGACGTGATCGTCGCCC
CGTTCCTCAAGCGCGCCATCCCCGAGGCGGTCTGGAAGAACCACCTGTGTCTGGTGGTCCACCCCGGCCCGCCCGGCGAC
CGAGGCCCGGCGGCCCTGGATTGGGCCATCCTGGAAGGCCACACGGACTGGGGCGTCACCGTGCTACAGGCCGAGGAAGG
CATGGATGAAGGTCCGGTCTGGGCCAGCCGCACCTTCCCGTTGCGTCACGCCACCAAGTCCAGCCTCTATCGCAACGAAG
TGGCCGACGGAGCGGTGGAAGCGGTGCTCGACGCCCTCGCCCGCCTGGGAGACGGACCGGTCGGTCGCCCTGCCCTGGCT
CCCTTCAGGCCTTCGCCCCGGCAGGCCGACCGCGCCATCGACTGGACCCATGACGATACCGCGACGGTGCTGGCCAAGAT
CCGCTCGGCCGACGGCACGCCCGGCCTGCTGGATAGTATTCTCGACCGGTCGGTCTACCTCCATGACGCCCATGCCGCCT
CGGGTCTGTCGGGCAAGCCGGGCGAACTGGTCGCCCGCTCGGGCCGGGCGGTGGCGCGGGCCACCACCGACGGCGCCGTG
TGGATCGGCCATCTGCGCGCCCGGGAGGAGCACGGCCTCAAGCTGCCAGCGCTGGACGTGCTGGGGCCGCAGGACCATCT
GCCCGAAGCCCCCGGCTATCACGACATCTGGTACGACGAGCGCCACGGGGTGGGCTATCTCCACTTCCCCTTCGTCAACG
GCGCCATGAGCACCGATCAGTGCCGCCGCCTCCGGGCCGCCTTCGTCAAGGCCGCGCAACGGCCCACCAAGGTCATCGCC
CTGATGGGCGGACCGGATTTCTGGTCCAACGGCATTCATCTGTGCACCATCGAATCCGCAGCCAGCCCGGCCGAGGAATC
CTGGGCCAACATCAACGCCATGAACGACCTGACCCGCGAGATCATCACCTGCGGCAGCCATCTCACCGTGGCCGCGATGC
AGGGCAATGCCGGAGCCGGGGGGGTGTTCATGGCCCTGGCCGCCGATCTGGTGGCGGCGCGGGAAGCAGTGGTGCTCAAC
CCCCATTACAAGGGCATGGGCAACCTCTACGGCTCGGAATACTGGACCTATCTGCTGCCCCGGCGCTGCGGCCCCGACAA
GGCGCGTCAGGTGGTCGAGGCCCGCCTGCCCATGGGCACCGCCGAGGCCGAGCGCCTGGGGCTGATCGACTGCCGCTTTG
GCCGCGACGTGCCGGAATTCCGCCGTCTGGTGGAGGAAATGGCCGAGGCGCTGACCACCGACCCGGCACTGGACGAGCGC
CTGGCCGCCAAGCGCCTGAGCCGTGCCGCCGACGAGGCGGCAAAGCCGCTGGAGCAATACCGCGCCGAGGAGCTGGAGCA
CATGAAGCTGAACTTCTACGGCTTCGATCCCAGCTACCACGTGGCGCGCTACAACTTCATCCATAAAGTAAAGAAATCAC
GCACGCCACTATATCTTGCGGTTCATCGTTCAAAAATAAACAACATTCGATAA

Upstream 100 bases:

>100_bases
GCCGGGAAGATTCCCACCACTTCGTCCAGATGAAGACCCGCATGGGCGGCAACCGGGTGGTGGACTGGCTGGCCGGCGAA
CAGTTGCCGAGGATCTGCTG

Downstream 100 bases:

>100_bases
ACAACCCCAATCTGTATACCGGACACTACCGGAACATAACCAGAACATATCGTGACTTAACTTACCCCAGGCTTACACAA
CTTGTCATAACTTGGCATTT

Product: sensor protein hoxX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MHVLLLAHSFNSLTQRLWVELSELGHDVTCEFDVNDAVTLQAVELARPDVIVAPFLKRAIPEAVWKNHLCLVVHPGPPGD
RGPAALDWAILEGHTDWGVTVLQAEEGMDEGPVWASRTFPLRHATKSSLYRNEVADGAVEAVLDALARLGDGPVGRPALA
PFRPSPRQADRAIDWTHDDTATVLAKIRSADGTPGLLDSILDRSVYLHDAHAASGLSGKPGELVARSGRAVARATTDGAV
WIGHLRAREEHGLKLPALDVLGPQDHLPEAPGYHDIWYDERHGVGYLHFPFVNGAMSTDQCRRLRAAFVKAAQRPTKVIA
LMGGPDFWSNGIHLCTIESAASPAEESWANINAMNDLTREIITCGSHLTVAAMQGNAGAGGVFMALAADLVAAREAVVLN
PHYKGMGNLYGSEYWTYLLPRRCGPDKARQVVEARLPMGTAEAERLGLIDCRFGRDVPEFRRLVEEMAEALTTDPALDER
LAAKRLSRAADEAAKPLEQYRAEELEHMKLNFYGFDPSYHVARYNFIHKVKKSRTPLYLAVHRSKINNIR

Sequences:

>Translated_550_residues
MHVLLLAHSFNSLTQRLWVELSELGHDVTCEFDVNDAVTLQAVELARPDVIVAPFLKRAIPEAVWKNHLCLVVHPGPPGD
RGPAALDWAILEGHTDWGVTVLQAEEGMDEGPVWASRTFPLRHATKSSLYRNEVADGAVEAVLDALARLGDGPVGRPALA
PFRPSPRQADRAIDWTHDDTATVLAKIRSADGTPGLLDSILDRSVYLHDAHAASGLSGKPGELVARSGRAVARATTDGAV
WIGHLRAREEHGLKLPALDVLGPQDHLPEAPGYHDIWYDERHGVGYLHFPFVNGAMSTDQCRRLRAAFVKAAQRPTKVIA
LMGGPDFWSNGIHLCTIESAASPAEESWANINAMNDLTREIITCGSHLTVAAMQGNAGAGGVFMALAADLVAAREAVVLN
PHYKGMGNLYGSEYWTYLLPRRCGPDKARQVVEARLPMGTAEAERLGLIDCRFGRDVPEFRRLVEEMAEALTTDPALDER
LAAKRLSRAADEAAKPLEQYRAEELEHMKLNFYGFDPSYHVARYNFIHKVKKSRTPLYLAVHRSKINNIR
>Mature_550_residues
MHVLLLAHSFNSLTQRLWVELSELGHDVTCEFDVNDAVTLQAVELARPDVIVAPFLKRAIPEAVWKNHLCLVVHPGPPGD
RGPAALDWAILEGHTDWGVTVLQAEEGMDEGPVWASRTFPLRHATKSSLYRNEVADGAVEAVLDALARLGDGPVGRPALA
PFRPSPRQADRAIDWTHDDTATVLAKIRSADGTPGLLDSILDRSVYLHDAHAASGLSGKPGELVARSGRAVARATTDGAV
WIGHLRAREEHGLKLPALDVLGPQDHLPEAPGYHDIWYDERHGVGYLHFPFVNGAMSTDQCRRLRAAFVKAAQRPTKVIA
LMGGPDFWSNGIHLCTIESAASPAEESWANINAMNDLTREIITCGSHLTVAAMQGNAGAGGVFMALAADLVAAREAVVLN
PHYKGMGNLYGSEYWTYLLPRRCGPDKARQVVEARLPMGTAEAERLGLIDCRFGRDVPEFRRLVEEMAEALTTDPALDER
LAAKRLSRAADEAAKPLEQYRAEELEHMKLNFYGFDPSYHVARYNFIHKVKKSRTPLYLAVHRSKINNIR

Specific function: Involved in the post-translational processing of the hydrogenase large subunit [H]

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001753
- InterPro:   IPR005793
- InterPro:   IPR002376
- InterPro:   IPR011034
- InterPro:   IPR015518
- InterPro:   IPR009188 [H]

Pfam domain/function: PF00378 ECH; PF02911 Formyl_trans_C; PF00551 Formyl_trans_N [H]

EC number: NA

Molecular weight: Translated: 60412; Mature: 60412

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS00166 ENOYL_COA_HYDRATASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVLLLAHSFNSLTQRLWVELSELGHDVTCEFDVNDAVTLQAVELARPDVIVAPFLKRAI
CEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHCCCCEEHHHHHHHHH
PEAVWKNHLCLVVHPGPPGDRGPAALDWAILEGHTDWGVTVLQAEEGMDEGPVWASRTFP
HHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCC
LRHATKSSLYRNEVADGAVEAVLDALARLGDGPVGRPALAPFRPSPRQADRAIDWTHDDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCH
ATVLAKIRSADGTPGLLDSILDRSVYLHDAHAASGLSGKPGELVARSGRAVARATTDGAV
HHHHHHHHCCCCCCHHHHHHHCCCEEEECCHHCCCCCCCCHHHHHCCCCEEEEECCCCCE
WIGHLRAREEHGLKLPALDVLGPQDHLPEAPGYHDIWYDERHGVGYLHFPFVNGAMSTDQ
EEEEHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHH
CRRLRAAFVKAAQRPTKVIALMGGPDFWSNGIHLCTIESAASPAEESWANINAMNDLTRE
HHHHHHHHHHHHCCCCEEEEEECCCCHHCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHH
IITCGSHLTVAAMQGNAGAGGVFMALAADLVAAREAVVLNPHYKGMGNLYGSEYWTYLLP
HHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHCC
RRCGPDKARQVVEARLPMGTAEAERLGLIDCRFGRDVPEFRRLVEEMAEALTTDPALDER
CCCCHHHHHHHHHHHCCCCCCCHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHH
LAAKRLSRAADEAAKPLEQYRAEELEHMKLNFYGFDPSYHVARYNFIHKVKKSRTPLYLA
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE
VHRSKINNIR
EEHHHHCCCC
>Mature Secondary Structure
MHVLLLAHSFNSLTQRLWVELSELGHDVTCEFDVNDAVTLQAVELARPDVIVAPFLKRAI
CEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHCCCCEEHHHHHHHHH
PEAVWKNHLCLVVHPGPPGDRGPAALDWAILEGHTDWGVTVLQAEEGMDEGPVWASRTFP
HHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCC
LRHATKSSLYRNEVADGAVEAVLDALARLGDGPVGRPALAPFRPSPRQADRAIDWTHDDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCH
ATVLAKIRSADGTPGLLDSILDRSVYLHDAHAASGLSGKPGELVARSGRAVARATTDGAV
HHHHHHHHCCCCCCHHHHHHHCCCEEEECCHHCCCCCCCCHHHHHCCCCEEEEECCCCCE
WIGHLRAREEHGLKLPALDVLGPQDHLPEAPGYHDIWYDERHGVGYLHFPFVNGAMSTDQ
EEEEHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHH
CRRLRAAFVKAAQRPTKVIALMGGPDFWSNGIHLCTIESAASPAEESWANINAMNDLTRE
HHHHHHHHHHHHCCCCEEEEEECCCCHHCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHH
IITCGSHLTVAAMQGNAGAGGVFMALAADLVAAREAVVLNPHYKGMGNLYGSEYWTYLLP
HHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHCC
RRCGPDKARQVVEARLPMGTAEAERLGLIDCRFGRDVPEFRRLVEEMAEALTTDPALDER
CCCCHHHHHHHHHHHCCCCCCCHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHH
LAAKRLSRAADEAAKPLEQYRAEELEHMKLNFYGFDPSYHVARYNFIHKVKKSRTPLYLA
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE
VHRSKINNIR
EEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8510650; 12597275 [H]