| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is ubiG
Identifier: 83310710
GI number: 83310710
Start: 1736932
End: 1737681
Strand: Reverse
Name: ubiG
Synonym: amb1611
Alternate gene names: 83310710
Gene position: 1737681-1736932 (Counterclockwise)
Preceding gene: 83310719
Following gene: 83310707
Centisome position: 34.98
GC content: 67.87
Gene sequence:
>750_bases GTGGAGTTGAAATTCATGGACCACGTGGGCACGGCATCGCCCGAGGAAATCGCCCGGTTCACCGCCATGGCCGAGGCCTG GTGGGACCCGCAGGGCAAGTTCAAGCCGCTGCACCGCTTCAATCCCGTCCGCCTGGCCTTCATGCGCCGGCATTTCGCCG CCCATTTCGGCCGTGACGAGAGCCTGATGCGCCCGTTCGAGGGCCTGACCCTGCTGGACGTGGGCAGCGGCGGCGGCCTG CTGTCCGAGCCCCTGGCCCGCATGGGCTTTGCCGTCACCGGCATCGACGCGGGCGACAAGAACGTGGCCGTCGCCCGCCT GCACGCCGAGCAGACCGGCGTGCCGGTGGACTACCGTGTATCAACGCCCGAGCAACTCGATCCCAACGAGGCCTTCGACG TGGTGCTGTCCATGGAAGTGGTCGAGCACGTTCCCGACGTCTCGGCCTTCCTCGGCCACGCCACCGCCCGCCTGAAGCCC GGCGGCGTGTTCATGGGCGCCACCCTGAACCGCACGGCCAAGGCCTGGGCCCTGGCGGTGGTCGGCGCCGAATACGTGCT GGGCTGGCTGCCCAAGGGCACCCACGACTGGAACAAGTTCGTCCGCCCCTCGGAATTCGCCGCCATGCTGCGCGATCGCG GCATCACCGTGCGCCAGATGGCCGGCATGGCCTTCAACCCGCTCAGCGACACCTGGCGCGAGACCGACAATCTCGACGTC AATTACATGCTGTTCGGGGTCAAGGGCTAA
Upstream 100 bases:
>100_bases GCGAAAAACTCTCGTTTGCGCGGTTGCCGCCGGAAGGGCGCGTATTCATACTCTGTCGCCCAGCGGGACGCAAGCACGGC CCCCTTACGAAATGTTGCAG
Downstream 100 bases:
>100_bases GCCCCGCCCGGCGGCGGAAACACCCCATTTCGGGGGCTTTTGCCCCCGATCCCCCAATCGGGAAGCACAGCTTCCCGAAC CCTTCAGCTTATTAATCCAT
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MELKFMDHVGTASPEEIARFTAMAEAWWDPQGKFKPLHRFNPVRLAFMRRHFAAHFGRDESLMRPFEGLTLLDVGSGGGL LSEPLARMGFAVTGIDAGDKNVAVARLHAEQTGVPVDYRVSTPEQLDPNEAFDVVLSMEVVEHVPDVSAFLGHATARLKP GGVFMGATLNRTAKAWALAVVGAEYVLGWLPKGTHDWNKFVRPSEFAAMLRDRGITVRQMAGMAFNPLSDTWRETDNLDV NYMLFGVKG
Sequences:
>Translated_249_residues MELKFMDHVGTASPEEIARFTAMAEAWWDPQGKFKPLHRFNPVRLAFMRRHFAAHFGRDESLMRPFEGLTLLDVGSGGGL LSEPLARMGFAVTGIDAGDKNVAVARLHAEQTGVPVDYRVSTPEQLDPNEAFDVVLSMEVVEHVPDVSAFLGHATARLKP GGVFMGATLNRTAKAWALAVVGAEYVLGWLPKGTHDWNKFVRPSEFAAMLRDRGITVRQMAGMAFNPLSDTWRETDNLDV NYMLFGVKG >Mature_249_residues MELKFMDHVGTASPEEIARFTAMAEAWWDPQGKFKPLHRFNPVRLAFMRRHFAAHFGRDESLMRPFEGLTLLDVGSGGGL LSEPLARMGFAVTGIDAGDKNVAVARLHAEQTGVPVDYRVSTPEQLDPNEAFDVVLSMEVVEHVPDVSAFLGHATARLKP GGVFMGATLNRTAKAWALAVVGAEYVLGWLPKGTHDWNKFVRPSEFAAMLRDRGITVRQMAGMAFNPLSDTWRETDNLDV NYMLFGVKG
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family
Homologues:
Organism=Homo sapiens, GI118600965, Length=243, Percent_Identity=39.0946502057613, Blast_Score=192, Evalue=2e-49, Organism=Escherichia coli, GI1788564, Length=232, Percent_Identity=43.5344827586207, Blast_Score=203, Evalue=8e-54, Organism=Caenorhabditis elegans, GI115533050, Length=251, Percent_Identity=34.2629482071713, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6324476, Length=274, Percent_Identity=30.2919708029197, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI281365311, Length=245, Percent_Identity=32.6530612244898, Blast_Score=137, Evalue=6e-33, Organism=Drosophila melanogaster, GI24585589, Length=266, Percent_Identity=30.4511278195489, Blast_Score=128, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UBIG_MAGSA (Q2W6W0)
Other databases:
- EMBL: AP007255 - RefSeq: YP_420974.1 - ProteinModelPortal: Q2W6W0 - STRING: Q2W6W0 - GeneID: 3804635 - GenomeReviews: AP007255_GR - KEGG: mag:amb1611 - NMPDR: fig|342108.5.peg.1439 - eggNOG: COG2227 - HOGENOM: HBG738842 - OMA: KFITPDE - PhylomeDB: Q2W6W0 - ProtClustDB: PRK05134 - BioCyc: MMAG342108:AMB1611-MONOMER - HAMAP: MF_00472 - InterPro: IPR013216 - InterPro: IPR010233 - TIGRFAMs: TIGR01983
Pfam domain/function: PF08241 Methyltransf_11
EC number: =2.1.1.64
Molecular weight: Translated: 27531; Mature: 27531
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKFMDHVGTASPEEIARFTAMAEAWWDPQGKFKPLHRFNPVRLAFMRRHFAAHFGRDE CCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH SLMRPFEGLTLLDVGSGGGLLSEPLARMGFAVTGIDAGDKNVAVARLHAEQTGVPVDYRV HHHCCCCCEEEEEECCCCCHHHHHHHHHCEEEEECCCCCCCEEEEEEEHHHCCCCEEEEE STPEQLDPNEAFDVVLSMEVVEHVPDVSAFLGHATARLKPGGVFMGATLNRTAKAWALAV CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCEEECCCCCCHHHHHHHHH VGAEYVLGWLPKGTHDWNKFVRPSEFAAMLRDRGITVRQMAGMAFNPLSDTWRETDNLDV HHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHCCCCCCE NYMLFGVKG EEEEEEECC >Mature Secondary Structure MELKFMDHVGTASPEEIARFTAMAEAWWDPQGKFKPLHRFNPVRLAFMRRHFAAHFGRDE CCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH SLMRPFEGLTLLDVGSGGGLLSEPLARMGFAVTGIDAGDKNVAVARLHAEQTGVPVDYRV HHHCCCCCEEEEEECCCCCHHHHHHHHHCEEEEECCCCCCCEEEEEEEHHHCCCCEEEEE STPEQLDPNEAFDVVLSMEVVEHVPDVSAFLGHATARLKPGGVFMGATLNRTAKAWALAV CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCEEECCCCCCHHHHHHHHH VGAEYVLGWLPKGTHDWNKFVRPSEFAAMLRDRGITVRQMAGMAFNPLSDTWRETDNLDV HHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHCCCCCCE NYMLFGVKG EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA