| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310699
Identifier: 83310699
GI number: 83310699
Start: 1726967
End: 1727293
Strand: Reverse
Name: 83310699
Synonym: amb1600
Alternate gene names: NA
Gene position: 1727293-1726967 (Counterclockwise)
Preceding gene: 83310700
Following gene: 83310693
Centisome position: 34.77
GC content: 63.61
Gene sequence:
>327_bases GTGACGCAGATCAAGGAACGGCGGCAGCATATCCGCAAAATGGGCGACGGCCTCGCCGTGCTGATCGACGGCAAGGTATT TCCCGTGGTCAACGTCTCCATTTCCGGCGTCAGCTTCCAGGGAGCCGGTTACCGGCCCGGCGATCGCGTCCGCCTGACCC TGGCCGCCCTGCAGGCGCTCGACGACAATGTCGAAGCGATGGTCACCATCAAATCAGCCGACAGCGGCATCCTGCGCTGC GAATTCTCGCCCACCACCAAGCTGATGCGCTACATCGTCGGCCATCTGGGCGATGTCACCGGAGCCGAGCCCGCCTATTT CCGCTGA
Upstream 100 bases:
>100_bases GCGCAATAACTCCCCCCTTCGCGTCCCGTTTACATGAGCCGCAAACGGCGTTCACGACTATCCGCTATAGGGTCTTATAC CAAACGTTGGGAGTCATCCG
Downstream 100 bases:
>100_bases CCGCCGTCAGTACAGGTGCTGGCCGCCGGTGACGAACACCTCGGTGCCGGTGACATAGTCGAAATCCGAGCCGCACAGGC GGAACACGGTTCCCGCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTQIKERRQHIRKMGDGLAVLIDGKVFPVVNVSISGVSFQGAGYRPGDRVRLTLAALQALDDNVEAMVTIKSADSGILRC EFSPTTKLMRYIVGHLGDVTGAEPAYFR
Sequences:
>Translated_108_residues MTQIKERRQHIRKMGDGLAVLIDGKVFPVVNVSISGVSFQGAGYRPGDRVRLTLAALQALDDNVEAMVTIKSADSGILRC EFSPTTKLMRYIVGHLGDVTGAEPAYFR >Mature_107_residues TQIKERRQHIRKMGDGLAVLIDGKVFPVVNVSISGVSFQGAGYRPGDRVRLTLAALQALDDNVEAMVTIKSADSGILRCE FSPTTKLMRYIVGHLGDVTGAEPAYFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11794; Mature: 11663
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIKERRQHIRKMGDGLAVLIDGKVFPVVNVSISGVSFQGAGYRPGDRVRLTLAALQAL CCCHHHHHHHHHHHCCCEEEEECCCEEEEEEEEECCEEECCCCCCCCCCEEHHHHHHHHH DDNVEAMVTIKSADSGILRCEFSPTTKLMRYIVGHLGDVTGAEPAYFR CCCCEEEEEEECCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TQIKERRQHIRKMGDGLAVLIDGKVFPVVNVSISGVSFQGAGYRPGDRVRLTLAALQAL CCHHHHHHHHHHHCCCEEEEECCCEEEEEEEEECCEEECCCCCCCCCCEEHHHHHHHHH DDNVEAMVTIKSADSGILRCEFSPTTKLMRYIVGHLGDVTGAEPAYFR CCCCEEEEEEECCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA