Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83310599

Identifier: 83310599

GI number: 83310599

Start: 1636785

End: 1637390

Strand: Reverse

Name: 83310599

Synonym: amb1500

Alternate gene names: NA

Gene position: 1637390-1636785 (Counterclockwise)

Preceding gene: 83310600

Following gene: 83310598

Centisome position: 32.96

GC content: 74.09

Gene sequence:

>606_bases
ATGAACCTCGGCGCCATGACCCTCGACGACCATATCGCCCGTTTCCTTGCCGGGGGCGGCCGCATTCAGGTCATTCAACC
CGCGTCCGGCTTTGCCCCTCTTCCGGACAATCTCCGGCACCGGGGCCGCCGCACGCGCCCCCTCGGCGCCGAGGCGATCG
CCGCCATCCCGCCGGCGACGGCTTGCGCGCCGCCTCCCTCTCCGCCCCGCACCGCCGGACCTCGCCCCGTGACGCGGCCG
CCGCAAAAAGCGCACCGCCCCGGCCCCAAGCCCGCCGCCATCGAGCCCCGCATCGTCCGCGCCGCCCGATTGGCCATCAC
GGGACGGACGCGGCCGGAGATCGCCGCCGCCATGGGGATCGACGAGGATTCGGTCCGGTCCTACCTGTCGCGCGCCCGCA
AGGCCGGTCTGGACGTCCGCCGGGGCAACTCGCCCGACCCCGCCTTGACCGCCCGGATCGCCGCCGCCTGGCGCGCCGTT
CCGGACCCGACGACCCGCAAGATCGCCGCCGGGCTCGGCGTCGCGCGGACCACCGTCCTGAAACACCTCAAGCTCGCCGG
CATCGCCCGGACACCCGCCCATTGCCACGCCAAGAGGGGGAAATAA

Upstream 100 bases:

>100_bases
CGGGAGAGCAATGCCGCCGCCTCGAGGTGACCGGCGCCTCCGCCTCCGCCGTGCGCGCCAAGTTCGCCCCGGTCGCCGCC
GAGCTCGAGGGAGGCTTGGC

Downstream 100 bases:

>100_bases
TGGCTGGAAGCGTCAACAAGGCCATCTTGGTCGGGCATCTCGGCCGTGATCCGGAGGTCCGCACCGGACAGGACGGATCG
AAGATCGTCAATCTCAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MNLGAMTLDDHIARFLAGGGRIQVIQPASGFAPLPDNLRHRGRRTRPLGAEAIAAIPPATACAPPPSPPRTAGPRPVTRP
PQKAHRPGPKPAAIEPRIVRAARLAITGRTRPEIAAAMGIDEDSVRSYLSRARKAGLDVRRGNSPDPALTARIAAAWRAV
PDPTTRKIAAGLGVARTTVLKHLKLAGIARTPAHCHAKRGK

Sequences:

>Translated_201_residues
MNLGAMTLDDHIARFLAGGGRIQVIQPASGFAPLPDNLRHRGRRTRPLGAEAIAAIPPATACAPPPSPPRTAGPRPVTRP
PQKAHRPGPKPAAIEPRIVRAARLAITGRTRPEIAAAMGIDEDSVRSYLSRARKAGLDVRRGNSPDPALTARIAAAWRAV
PDPTTRKIAAGLGVARTTVLKHLKLAGIARTPAHCHAKRGK
>Mature_201_residues
MNLGAMTLDDHIARFLAGGGRIQVIQPASGFAPLPDNLRHRGRRTRPLGAEAIAAIPPATACAPPPSPPRTAGPRPVTRP
PQKAHRPGPKPAAIEPRIVRAARLAITGRTRPEIAAAMGIDEDSVRSYLSRARKAGLDVRRGNSPDPALTARIAAAWRAV
PDPTTRKIAAGLGVARTTVLKHLKLAGIARTPAHCHAKRGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21204; Mature: 21204

Theoretical pI: Translated: 12.35; Mature: 12.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLGAMTLDDHIARFLAGGGRIQVIQPASGFAPLPDNLRHRGRRTRPLGAEAIAAIPPAT
CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCHHHHHCCCCC
ACAPPPSPPRTAGPRPVTRPPQKAHRPGPKPAAIEPRIVRAARLAITGRTRPEIAAAMGI
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCC
DEDSVRSYLSRARKAGLDVRRGNSPDPALTARIAAAWRAVPDPTTRKIAAGLGVARTTVL
CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH
KHLKLAGIARTPAHCHAKRGK
HHHHHHCCCCCCHHHHCCCCC
>Mature Secondary Structure
MNLGAMTLDDHIARFLAGGGRIQVIQPASGFAPLPDNLRHRGRRTRPLGAEAIAAIPPAT
CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCHHHHHCCCCC
ACAPPPSPPRTAGPRPVTRPPQKAHRPGPKPAAIEPRIVRAARLAITGRTRPEIAAAMGI
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCC
DEDSVRSYLSRARKAGLDVRRGNSPDPALTARIAAAWRAVPDPTTRKIAAGLGVARTTVL
CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH
KHLKLAGIARTPAHCHAKRGK
HHHHHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA