| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310599
Identifier: 83310599
GI number: 83310599
Start: 1636785
End: 1637390
Strand: Reverse
Name: 83310599
Synonym: amb1500
Alternate gene names: NA
Gene position: 1637390-1636785 (Counterclockwise)
Preceding gene: 83310600
Following gene: 83310598
Centisome position: 32.96
GC content: 74.09
Gene sequence:
>606_bases ATGAACCTCGGCGCCATGACCCTCGACGACCATATCGCCCGTTTCCTTGCCGGGGGCGGCCGCATTCAGGTCATTCAACC CGCGTCCGGCTTTGCCCCTCTTCCGGACAATCTCCGGCACCGGGGCCGCCGCACGCGCCCCCTCGGCGCCGAGGCGATCG CCGCCATCCCGCCGGCGACGGCTTGCGCGCCGCCTCCCTCTCCGCCCCGCACCGCCGGACCTCGCCCCGTGACGCGGCCG CCGCAAAAAGCGCACCGCCCCGGCCCCAAGCCCGCCGCCATCGAGCCCCGCATCGTCCGCGCCGCCCGATTGGCCATCAC GGGACGGACGCGGCCGGAGATCGCCGCCGCCATGGGGATCGACGAGGATTCGGTCCGGTCCTACCTGTCGCGCGCCCGCA AGGCCGGTCTGGACGTCCGCCGGGGCAACTCGCCCGACCCCGCCTTGACCGCCCGGATCGCCGCCGCCTGGCGCGCCGTT CCGGACCCGACGACCCGCAAGATCGCCGCCGGGCTCGGCGTCGCGCGGACCACCGTCCTGAAACACCTCAAGCTCGCCGG CATCGCCCGGACACCCGCCCATTGCCACGCCAAGAGGGGGAAATAA
Upstream 100 bases:
>100_bases CGGGAGAGCAATGCCGCCGCCTCGAGGTGACCGGCGCCTCCGCCTCCGCCGTGCGCGCCAAGTTCGCCCCGGTCGCCGCC GAGCTCGAGGGAGGCTTGGC
Downstream 100 bases:
>100_bases TGGCTGGAAGCGTCAACAAGGCCATCTTGGTCGGGCATCTCGGCCGTGATCCGGAGGTCCGCACCGGACAGGACGGATCG AAGATCGTCAATCTCAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MNLGAMTLDDHIARFLAGGGRIQVIQPASGFAPLPDNLRHRGRRTRPLGAEAIAAIPPATACAPPPSPPRTAGPRPVTRP PQKAHRPGPKPAAIEPRIVRAARLAITGRTRPEIAAAMGIDEDSVRSYLSRARKAGLDVRRGNSPDPALTARIAAAWRAV PDPTTRKIAAGLGVARTTVLKHLKLAGIARTPAHCHAKRGK
Sequences:
>Translated_201_residues MNLGAMTLDDHIARFLAGGGRIQVIQPASGFAPLPDNLRHRGRRTRPLGAEAIAAIPPATACAPPPSPPRTAGPRPVTRP PQKAHRPGPKPAAIEPRIVRAARLAITGRTRPEIAAAMGIDEDSVRSYLSRARKAGLDVRRGNSPDPALTARIAAAWRAV PDPTTRKIAAGLGVARTTVLKHLKLAGIARTPAHCHAKRGK >Mature_201_residues MNLGAMTLDDHIARFLAGGGRIQVIQPASGFAPLPDNLRHRGRRTRPLGAEAIAAIPPATACAPPPSPPRTAGPRPVTRP PQKAHRPGPKPAAIEPRIVRAARLAITGRTRPEIAAAMGIDEDSVRSYLSRARKAGLDVRRGNSPDPALTARIAAAWRAV PDPTTRKIAAGLGVARTTVLKHLKLAGIARTPAHCHAKRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21204; Mature: 21204
Theoretical pI: Translated: 12.35; Mature: 12.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLGAMTLDDHIARFLAGGGRIQVIQPASGFAPLPDNLRHRGRRTRPLGAEAIAAIPPAT CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCHHHHHCCCCC ACAPPPSPPRTAGPRPVTRPPQKAHRPGPKPAAIEPRIVRAARLAITGRTRPEIAAAMGI CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCC DEDSVRSYLSRARKAGLDVRRGNSPDPALTARIAAAWRAVPDPTTRKIAAGLGVARTTVL CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH KHLKLAGIARTPAHCHAKRGK HHHHHHCCCCCCHHHHCCCCC >Mature Secondary Structure MNLGAMTLDDHIARFLAGGGRIQVIQPASGFAPLPDNLRHRGRRTRPLGAEAIAAIPPAT CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCHHHHHCCCCC ACAPPPSPPRTAGPRPVTRPPQKAHRPGPKPAAIEPRIVRAARLAITGRTRPEIAAAMGI CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCC DEDSVRSYLSRARKAGLDVRRGNSPDPALTARIAAAWRAVPDPTTRKIAAGLGVARTTVL CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH KHLKLAGIARTPAHCHAKRGK HHHHHHCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA