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The map label for this gene is ssb [H]

Identifier: 83310598

GI number: 83310598

Start: 1636204

End: 1636785

Strand: Reverse

Name: ssb [H]

Synonym: amb1499

Alternate gene names: 83310598

Gene position: 1636785-1636204 (Counterclockwise)

Preceding gene: 83310599

Following gene: 83310597

Centisome position: 32.95

GC content: 67.18

Gene sequence:

>582_bases
ATGGCTGGAAGCGTCAACAAGGCCATCTTGGTCGGGCATCTCGGCCGTGATCCGGAGGTCCGCACCGGACAGGACGGATC
GAAGATCGTCAATCTCAACATCGCCACCTCCGAGACATGGAAGGATCGCGGCACCGGCGAGCGCAAGGAAAAGACCGAGT
GGCATCGGGTGGTGATCTTCAACCCCAACCTCGCCGAGGTGGCCGAGCGGTTCTTGAAGAAAGGCTCGCCGGTCTATGTG
GAAGGCCAGATCCAGACCCGCAAATGGACCGATCAACAAGGTGTCGAGCGCTATTCGACCGAGGTGGTGATCGGCCGCTT
CAAGGGCGACCTCACCCTCTTGCCGTCGAGCGGCGGCGGCAATCGCGGCCCCGCCGACGAGCGCGAGGGCTACGGCACCA
CCCGCGACCGCCCCTATGATGGCGGCGTCGCCCCCAACGGGCGCAGCACGTCCAGCATGGCCGGCGGCGGCGGATCATGG
GAGCCTCCCGCCGATCTCGACGACGAGATCCCCTTCGCCACCGCCGCCGACGCCGCCGATCTGCTGCTCGGCCGGCGCAG
CCGCTACCGCGTCCGGGGGTGA

Upstream 100 bases:

>100_bases
CCGCCGGGCTCGGCGTCGCGCGGACCACCGTCCTGAAACACCTCAAGCTCGCCGGCATCGCCCGGACACCCGCCCATTGC
CACGCCAAGAGGGGGAAATA

Downstream 100 bases:

>100_bases
CGGCAATGGACGGGGCGCGCGCCACTTGGGCCGAACTGGCGGAGCGGATCGAGGCCAGCTTCGCCGCCGCCGGCACCCTC
GCGGATCTCAACCGCGCCGC

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAGSVNKAILVGHLGRDPEVRTGQDGSKIVNLNIATSETWKDRGTGERKEKTEWHRVVIFNPNLAEVAERFLKKGSPVYV
EGQIQTRKWTDQQGVERYSTEVVIGRFKGDLTLLPSSGGGNRGPADEREGYGTTRDRPYDGGVAPNGRSTSSMAGGGGSW
EPPADLDDEIPFATAADAADLLLGRRSRYRVRG

Sequences:

>Translated_193_residues
MAGSVNKAILVGHLGRDPEVRTGQDGSKIVNLNIATSETWKDRGTGERKEKTEWHRVVIFNPNLAEVAERFLKKGSPVYV
EGQIQTRKWTDQQGVERYSTEVVIGRFKGDLTLLPSSGGGNRGPADEREGYGTTRDRPYDGGVAPNGRSTSSMAGGGGSW
EPPADLDDEIPFATAADAADLLLGRRSRYRVRG
>Mature_192_residues
AGSVNKAILVGHLGRDPEVRTGQDGSKIVNLNIATSETWKDRGTGERKEKTEWHRVVIFNPNLAEVAERFLKKGSPVYVE
GQIQTRKWTDQQGVERYSTEVVIGRFKGDLTLLPSSGGGNRGPADEREGYGTTRDRPYDGGVAPNGRSTSSMAGGGGSWE
PPADLDDEIPFATAADAADLLLGRRSRYRVRG

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=108, Percent_Identity=32.4074074074074, Blast_Score=75, Evalue=5e-14,
Organism=Escherichia coli, GI1790494, Length=179, Percent_Identity=45.8100558659218, Blast_Score=144, Evalue=4e-36,
Organism=Drosophila melanogaster, GI85725234, Length=100, Percent_Identity=37, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24647376, Length=100, Percent_Identity=37, Blast_Score=74, Evalue=4e-14,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 20972; Mature: 20841

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSVNKAILVGHLGRDPEVRTGQDGSKIVNLNIATSETWKDRGTGERKEKTEWHRVVIF
CCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEE
NPNLAEVAERFLKKGSPVYVEGQIQTRKWTDQQGVERYSTEVVIGRFKGDLTLLPSSGGG
CCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHCCEEEEEEECCCEEEEECCCCC
NRGPADEREGYGTTRDRPYDGGVAPNGRSTSSMAGGGGSWEPPADLDDEIPFATAADAAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
LLLGRRSRYRVRG
HHHCCCCCEECCC
>Mature Secondary Structure 
AGSVNKAILVGHLGRDPEVRTGQDGSKIVNLNIATSETWKDRGTGERKEKTEWHRVVIF
CCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEE
NPNLAEVAERFLKKGSPVYVEGQIQTRKWTDQQGVERYSTEVVIGRFKGDLTLLPSSGGG
CCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHCCEEEEEEECCCEEEEECCCCC
NRGPADEREGYGTTRDRPYDGGVAPNGRSTSSMAGGGGSWEPPADLDDEIPFATAADAAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
LLLGRRSRYRVRG
HHHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]