| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310595
Identifier: 83310595
GI number: 83310595
Start: 1634687
End: 1635226
Strand: Reverse
Name: 83310595
Synonym: amb1496
Alternate gene names: NA
Gene position: 1635226-1634687 (Counterclockwise)
Preceding gene: 83310596
Following gene: 83310594
Centisome position: 32.92
GC content: 67.04
Gene sequence:
>540_bases ATGAGCCTGATCACCCCCGCCATCACTCCCGCCATCGGAACGCCGATGGAAGGGGGATTCCTCGGAGCCCGGTATATCGA CGAAAACGGCGCCCTGGCCGGTCTCGTCGTGTCGCGTGCTGAGGTTGGCGACTTCGACCCCGTTCCGTGGCTGAAGAAGC TCCGGGACGTGCCCGGCGCCTGCTCGCTGCTCGACGGCCGCGCCAATACCCGGGCGATGGCGGAAGCCGGCTCGGAGATC GCCCAGACGATCCTGGACCTCGAAATCGACGGCGTCGGCGGCTGGCACATCCCGGCGCTGGACCAGATGACCGCGCTCCG CGCCACCGCCATGCCCCGGGCCGGCATCACTCCGGCGCAGAGCCTGGCCGAGGTATTCCGGGAGGGCAGCCCCGAAGCCT TCCGGCAGGAATGGTACTGGACCAGCACCCAGTACAGCTCCGGCTCCGCCTGGCTGCAGTACTTCTACTACGGCTACCAG GACGGCAGCGCCAAGAGTTTCAGTTACCGGGTCCGAGCCGTCCGCAAATGTCTTCTTTAG
Upstream 100 bases:
>100_bases CCGGGTCCGAGCCGTCCGCAAATGCCTCCCCTTCACCCCCTGATCCCTTTACCGGCCGCTCCGGCGGCCGGGCCTTCCCA CACGCACCATGGAGATCCGA
Downstream 100 bases:
>100_bases CCCTTTAACCCTTTATCCGGCCGCTTCGGCGGCCGGGTGATGCCTGGAGGAGGTTTTGCATGGCGCTGGCCACTGAACTG CCCATCTACCGCGAGACATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSLITPAITPAIGTPMEGGFLGARYIDENGALAGLVVSRAEVGDFDPVPWLKKLRDVPGACSLLDGRANTRAMAEAGSEI AQTILDLEIDGVGGWHIPALDQMTALRATAMPRAGITPAQSLAEVFREGSPEAFRQEWYWTSTQYSSGSAWLQYFYYGYQ DGSAKSFSYRVRAVRKCLL
Sequences:
>Translated_179_residues MSLITPAITPAIGTPMEGGFLGARYIDENGALAGLVVSRAEVGDFDPVPWLKKLRDVPGACSLLDGRANTRAMAEAGSEI AQTILDLEIDGVGGWHIPALDQMTALRATAMPRAGITPAQSLAEVFREGSPEAFRQEWYWTSTQYSSGSAWLQYFYYGYQ DGSAKSFSYRVRAVRKCLL >Mature_178_residues SLITPAITPAIGTPMEGGFLGARYIDENGALAGLVVSRAEVGDFDPVPWLKKLRDVPGACSLLDGRANTRAMAEAGSEIA QTILDLEIDGVGGWHIPALDQMTALRATAMPRAGITPAQSLAEVFREGSPEAFRQEWYWTSTQYSSGSAWLQYFYYGYQD GSAKSFSYRVRAVRKCLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19473; Mature: 19342
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLITPAITPAIGTPMEGGFLGARYIDENGALAGLVVSRAEVGDFDPVPWLKKLRDVPGA CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEHHEEHHHCCCCCCCCHHHHHHHCCCCC CSLLDGRANTRAMAEAGSEIAQTILDLEIDGVGGWHIPALDQMTALRATAMPRAGITPAQ HHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHH SLAEVFREGSPEAFRQEWYWTSTQYSSGSAWLQYFYYGYQDGSAKSFSYRVRAVRKCLL HHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SLITPAITPAIGTPMEGGFLGARYIDENGALAGLVVSRAEVGDFDPVPWLKKLRDVPGA CCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEHHEEHHHCCCCCCCCHHHHHHHCCCCC CSLLDGRANTRAMAEAGSEIAQTILDLEIDGVGGWHIPALDQMTALRATAMPRAGITPAQ HHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHH SLAEVFREGSPEAFRQEWYWTSTQYSSGSAWLQYFYYGYQDGSAKSFSYRVRAVRKCLL HHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA