| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310578
Identifier: 83310578
GI number: 83310578
Start: 1617130
End: 1617714
Strand: Reverse
Name: 83310578
Synonym: amb1479
Alternate gene names: NA
Gene position: 1617714-1617130 (Counterclockwise)
Preceding gene: 83310579
Following gene: 83310577
Centisome position: 32.57
GC content: 69.91
Gene sequence:
>585_bases ATGAGCGCCCGCATCCGCAAGATCGTGGTGGTGGTCGAGGAGACCCGCTCCGAGATGGGCCGCCCCGTCGAGCCCCCCAC CCGCAAGGCGGCCGCCGTGGCGGTCATCGCCAATCCCTTCGCCGGGACCTATCAGGAGGACCTGTCCGAGCTGATCGCCA TGGGCGAGGAGTTGGGCGCCCTGCTGGGGCAAAAGGCGGTGGAGGCGCTGGGCATCGCCCCCGCCCAGGTGGAAAGCTAC GGCAAGGCCGCCGTGGTGGGCGAAAACGGCGAGCTGGAGCATGCCGCCGCCCTGCTTCACCCCAAGCTGGGCGCGCCCCT GCGCAAGGCGGTGGAGAAGGGCGCCGCCCTGGTGCCGTCGTCCAAGAAGCGGGGCGGCATGAACGCTCCCATCGACATTC CGCTGGGACACAAGGACGCCGCCTTCGTGCGCAGCCATTTCGACGCCATGGAAGTGCGAGTGCCCGATGCGCCCCGCGCC AACGAGATCGTGGTCGCCGTGGCGGTCACCGATTCAGGACGCCCCCTGCCGCGCGTGGGAGGCCTGACAGTGAGTGAGAT CAAGGGTGAGGACGGCCTGCGCTGA
Upstream 100 bases:
>100_bases ACGAGATGGTGGTGGTGCTGGTGATGACCACGGGTCCGCGCATCCATGCCCGGGTCGGCGGCCTCAAGGCCTCCGAGGTC AAGGGCGAGGACGGATTACG
Downstream 100 bases:
>100_bases CGCAGGACCGGTGTCGACACACGTCAAGGAGGGTTTCATGGATCGCAGAACCGTATTGAAGAGCTTTGCCCTGGCCGCCC TGATGGCCGGCAGCCAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSARIRKIVVVVEETRSEMGRPVEPPTRKAAAVAVIANPFAGTYQEDLSELIAMGEELGALLGQKAVEALGIAPAQVESY GKAAVVGENGELEHAAALLHPKLGAPLRKAVEKGAALVPSSKKRGGMNAPIDIPLGHKDAAFVRSHFDAMEVRVPDAPRA NEIVVAVAVTDSGRPLPRVGGLTVSEIKGEDGLR
Sequences:
>Translated_194_residues MSARIRKIVVVVEETRSEMGRPVEPPTRKAAAVAVIANPFAGTYQEDLSELIAMGEELGALLGQKAVEALGIAPAQVESY GKAAVVGENGELEHAAALLHPKLGAPLRKAVEKGAALVPSSKKRGGMNAPIDIPLGHKDAAFVRSHFDAMEVRVPDAPRA NEIVVAVAVTDSGRPLPRVGGLTVSEIKGEDGLR >Mature_193_residues SARIRKIVVVVEETRSEMGRPVEPPTRKAAAVAVIANPFAGTYQEDLSELIAMGEELGALLGQKAVEALGIAPAQVESYG KAAVVGENGELEHAAALLHPKLGAPLRKAVEKGAALVPSSKKRGGMNAPIDIPLGHKDAAFVRSHFDAMEVRVPDAPRAN EIVVAVAVTDSGRPLPRVGGLTVSEIKGEDGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20277; Mature: 20145
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARIRKIVVVVEETRSEMGRPVEPPTRKAAAVAVIANPFAGTYQEDLSELIAMGEELGA CCCCEEEEEEEEEHHHHHCCCCCCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHH LLGQKAVEALGIAPAQVESYGKAAVVGENGELEHAAALLHPKLGAPLRKAVEKGAALVPS HHHHHHHHHHCCCHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCHHHHHHHCCCEECCC SKKRGGMNAPIDIPLGHKDAAFVRSHFDAMEVRVPDAPRANEIVVAVAVTDSGRPLPRVG CCCCCCCCCCEECCCCCCHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCC GLTVSEIKGEDGLR CEEHEECCCCCCCC >Mature Secondary Structure SARIRKIVVVVEETRSEMGRPVEPPTRKAAAVAVIANPFAGTYQEDLSELIAMGEELGA CCCEEEEEEEEEHHHHHCCCCCCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHH LLGQKAVEALGIAPAQVESYGKAAVVGENGELEHAAALLHPKLGAPLRKAVEKGAALVPS HHHHHHHHHHCCCHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCHHHHHHHCCCEECCC SKKRGGMNAPIDIPLGHKDAAFVRSHFDAMEVRVPDAPRANEIVVAVAVTDSGRPLPRVG CCCCCCCCCCEECCCCCCHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCC GLTVSEIKGEDGLR CEEHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA