| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83310542
Identifier: 83310542
GI number: 83310542
Start: 1572354
End: 1573418
Strand: Reverse
Name: 83310542
Synonym: amb1443
Alternate gene names: NA
Gene position: 1573418-1572354 (Counterclockwise)
Preceding gene: 83310548
Following gene: 83310541
Centisome position: 31.68
GC content: 63.47
Gene sequence:
>1065_bases TTGCTGTGGGTGCTGCTAACCACATATCTGGGACTGGCCTTTCTCCACGGAGCCCTGTCCTACGGGCTGCAGACGGCGGT GGCCTCGTACCGGGCTTCCCTGTATCTGACCGTCGGGGTCAGCTACTTCGCGCTGTTCCAGCACGACAGGAACGATACGA TCTGGACCCTGAATCTGGTTATCCTGGCCGGACTGGCAGTGGTGCTTTTCGCCATTGCGGCCTGGCTGGTGCCCGAATGG CGACCGCAGGACCCCGGCCATATGGCCTTGTCCAGCCAGGCCTACGAGCGCAGCCGCGTGCTGCCCGCCCAGGCCGCCCA ATTTATCGCCCTCGCCGCCTTGCTCAGCCTGCCATCCTGGCTTCAGGTGGGTTCAAGCCTGTGGTTGCGCCTGGCTACTC TTCCCTTGCTGGCGGTCTCCATCTTCTTGTTCCACCGCTCGGTCTGGGTCATGCTGGCGGTCAGCGTGCTGGTCACGCTG GCGGCCTCGGGACGTGGCGCCGTGAGGGCGTTCGTCGTCGTCCAGTTCCTGCTGGTCGCCCTGGCCCTGGTATGGCTGCT GCTGGTCGGCCTGGATATGGATATCCTCTCGGCGTCCCTGCGCACGGCAGTCAATGAAGCCGTCGACCTGGACAACAACA CGCTGGACTGGCGCATCCAGGGCTGGCGTATCCTGGTGGAGCGGGCCATTTCCGACGGCCCGCTGTCCATCTTGTTCGGA GCCGGGTTCGGCATCGGATACGAGCGAAACATCGCTCAGTTATATGTGACGGCCTCGCCCCACAATTACTATGTCGAGTT GTTCCTGACCTCAGGGCTGTTGGGATGCGGCCTGTTCGTTCTATCCATCCTGTCCGTATTCAGACGGGCGCTGTCCCAGG CGCTCCACGGGGGGGCCAATGAAATGCTGGCGCTGCCGGGGATGGTGATCGGCGTGGTGGTGTACAGCGCCAGTTATTCG CCCCAATACGACACGGCGCTGATTCTTGGGCTGATTCTGGCTCTTCCCGCCATACCCCGCCGCCGCCCGATTCCGGAAGG CGTTTCCCAACCGGCGCCGCCATGA
Upstream 100 bases:
>100_bases GCCTGGAACTACAATCCATGGCACAGATATTTTCTTTATTTCACTGACAATCGCCACGCTCATCCGTCTAATTTCCCTGC GTCGAATAGATGGCTTGACG
Downstream 100 bases:
>100_bases TCGGTCGGTGCCTTGTCGCCCTCCTTGCCTGCCATAACCGGCGGACCGTCACCCGGGCCGCCCTGGAGACCCTGTTCCGC CAGGCCCTGCCGCCGGATCT
Product: Lipid A core - O-antigen ligase and related enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MLWVLLTTYLGLAFLHGALSYGLQTAVASYRASLYLTVGVSYFALFQHDRNDTIWTLNLVILAGLAVVLFAIAAWLVPEW RPQDPGHMALSSQAYERSRVLPAQAAQFIALAALLSLPSWLQVGSSLWLRLATLPLLAVSIFLFHRSVWVMLAVSVLVTL AASGRGAVRAFVVVQFLLVALALVWLLLVGLDMDILSASLRTAVNEAVDLDNNTLDWRIQGWRILVERAISDGPLSILFG AGFGIGYERNIAQLYVTASPHNYYVELFLTSGLLGCGLFVLSILSVFRRALSQALHGGANEMLALPGMVIGVVVYSASYS PQYDTALILGLILALPAIPRRRPIPEGVSQPAPP
Sequences:
>Translated_354_residues MLWVLLTTYLGLAFLHGALSYGLQTAVASYRASLYLTVGVSYFALFQHDRNDTIWTLNLVILAGLAVVLFAIAAWLVPEW RPQDPGHMALSSQAYERSRVLPAQAAQFIALAALLSLPSWLQVGSSLWLRLATLPLLAVSIFLFHRSVWVMLAVSVLVTL AASGRGAVRAFVVVQFLLVALALVWLLLVGLDMDILSASLRTAVNEAVDLDNNTLDWRIQGWRILVERAISDGPLSILFG AGFGIGYERNIAQLYVTASPHNYYVELFLTSGLLGCGLFVLSILSVFRRALSQALHGGANEMLALPGMVIGVVVYSASYS PQYDTALILGLILALPAIPRRRPIPEGVSQPAPP >Mature_354_residues MLWVLLTTYLGLAFLHGALSYGLQTAVASYRASLYLTVGVSYFALFQHDRNDTIWTLNLVILAGLAVVLFAIAAWLVPEW RPQDPGHMALSSQAYERSRVLPAQAAQFIALAALLSLPSWLQVGSSLWLRLATLPLLAVSIFLFHRSVWVMLAVSVLVTL AASGRGAVRAFVVVQFLLVALALVWLLLVGLDMDILSASLRTAVNEAVDLDNNTLDWRIQGWRILVERAISDGPLSILFG AGFGIGYERNIAQLYVTASPHNYYVELFLTSGLLGCGLFVLSILSVFRRALSQALHGGANEMLALPGMVIGVVVYSASYS PQYDTALILGLILALPAIPRRRPIPEGVSQPAPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38438; Mature: 38438
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWVLLTTYLGLAFLHGALSYGLQTAVASYRASLYLTVGVSYFALFQHDRNDTIWTLNLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHCCCCCCEEHHHHH ILAGLAVVLFAIAAWLVPEWRPQDPGHMALSSQAYERSRVLPAQAAQFIALAALLSLPSW HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH LQVGSSLWLRLATLPLLAVSIFLFHRSVWVMLAVSVLVTLAASGRGAVRAFVVVQFLLVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LALVWLLLVGLDMDILSASLRTAVNEAVDLDNNTLDWRIQGWRILVERAISDGPLSILFG HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEE AGFGIGYERNIAQLYVTASPHNYYVELFLTSGLLGCGLFVLSILSVFRRALSQALHGGAN CCCCCCCCCCEEEEEEEECCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC EMLALPGMVIGVVVYSASYSPQYDTALILGLILALPAIPRRRPIPEGVSQPAPP HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLWVLLTTYLGLAFLHGALSYGLQTAVASYRASLYLTVGVSYFALFQHDRNDTIWTLNLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHCCCCCCEEHHHHH ILAGLAVVLFAIAAWLVPEWRPQDPGHMALSSQAYERSRVLPAQAAQFIALAALLSLPSW HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH LQVGSSLWLRLATLPLLAVSIFLFHRSVWVMLAVSVLVTLAASGRGAVRAFVVVQFLLVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LALVWLLLVGLDMDILSASLRTAVNEAVDLDNNTLDWRIQGWRILVERAISDGPLSILFG HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEE AGFGIGYERNIAQLYVTASPHNYYVELFLTSGLLGCGLFVLSILSVFRRALSQALHGGAN CCCCCCCCCCEEEEEEEECCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC EMLALPGMVIGVVVYSASYSPQYDTALILGLILALPAIPRRRPIPEGVSQPAPP HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA